RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 ABCD3P28288 659 aa8.9□□□□□ -0.98
COL12A1-201ENST00000322507 IL2RGP31785 369 aa8.9□□□□□ -0.98
COL12A1-201ENST00000322507 RAB38P57729 211 aa8.9□□□□□ -0.98
COL12A1-201ENST00000322507 PRDX1Q06830 199 aaKnown RBP8.9□□□□□ -0.98
COL12A1-201ENST00000322507 FRMPD2BQ6IN97 320 aa8.9□□□□□ -0.98
COL12A1-201ENST00000322507 TMPRSS9Q7Z410 1059 aa8.9□□□□□ -0.98
COL12A1-201ENST00000322507 TTTY10Q9BZA0 68 aa8.9□□□□□ -0.98
COL12A1-201ENST00000322507 NXF5Q9H1B4 397 aaKnown RBP8.9□□□□□ -0.98
COL12A1-201ENST00000322507 SLC22A13Q9Y226 551 aa8.9□□□□□ -0.98
COL12A1-201ENST00000322507 KDM4FA0A1W2PPD8 638 aa8.9□□□□□ -0.98
COL12A1-201ENST00000322507 PIPP12273 146 aaPredicted RBP8.9□□□□□ -0.98
COL12A1-201ENST00000322507 ADIPOQQ15848 244 aa8.9□□□□□ -0.98
COL12A1-201ENST00000322507 OR51B4Q9Y5P0 310 aa8.9□□□□□ -0.98
COL12A1-201ENST00000322507 ARHGAP32A7KAX9 2087 aa8.9□□□□□ -0.98
COL12A1-201ENST00000322507 A6NL46 340 aa8.9□□□□□ -0.98
COL12A1-201ENST00000322507 ARSDP51689 593 aa8.9□□□□□ -0.98
COL12A1-201ENST00000322507 RPS18P62269 152 aaKnown RBP8.9□□□□□ -0.98
COL12A1-201ENST00000322507 ETFBKMTQ8IXQ9 262 aa8.9□□□□□ -0.98
COL12A1-201ENST00000322507 APOOQ9BUR5 198 aa8.9□□□□□ -0.98
COL12A1-201ENST00000322507 Q9N2K0 584 aa8.9□□□□□ -0.98
COL12A1-201ENST00000322507 CXorf51AA0A1B0GTR3 108 aa8.9□□□□□ -0.98
COL12A1-201ENST00000322507 ARRDC5A6NEK1 342 aa8.9□□□□□ -0.98
COL12A1-201ENST00000322507 OR5AC1P0C628 307 aa8.9□□□□□ -0.98
COL12A1-201ENST00000322507 ADAMTSL4Q6UY14 1074 aa8.9□□□□□ -0.98
COL12A1-201ENST00000322507 TMEM208Q9BTX3 173 aa8.9□□□□□ -0.98
COL12A1-201ENST00000322507 FOXD2O60548 495 aaPredicted RBP8.9□□□□□ -0.98
COL12A1-201ENST00000322507 GPLD1P80108 840 aa8.9□□□□□ -0.98
COL12A1-201ENST00000322507 PARM1Q6UWI2 310 aa8.9□□□□□ -0.98
COL12A1-201ENST00000322507 CLECL1Q8IZS7 167 aa8.9□□□□□ -0.98
COL12A1-201ENST00000322507 OR5AS1Q8N127 324 aa8.9□□□□□ -0.98
COL12A1-201ENST00000322507 LYRM4Q9HD34 91 aa8.9□□□□□ -0.98
COL12A1-201ENST00000322507 NAT8BQ9UHF3 227 aa8.9□□□□□ -0.98
COL12A1-201ENST00000322507 HOXB5P09067 269 aa8.9□□□□□ -0.98
COL12A1-201ENST00000322507 CD79AP11912 226 aa8.9□□□□□ -0.98
COL12A1-201ENST00000322507 NSG1A0A0A6YYJ2 146 aa8.9□□□□□ -0.98
COL12A1-201ENST00000322507 LOC100289279A0A1B0GTE1 492 aa8.9□□□□□ -0.98
COL12A1-201ENST00000322507 GLRA1P23415 457 aa8.9□□□□□ -0.98
COL12A1-201ENST00000322507 KIR2DL3P43628 341 aa8.9□□□□□ -0.98
COL12A1-201ENST00000322507 SIRPAP78324 504 aa8.9□□□□□ -0.98
COL12A1-201ENST00000322507 Q6ZRG5 221 aa8.9□□□□□ -0.98
COL12A1-201ENST00000322507 SMG9Q9H0W8 520 aaKnown RBP8.9□□□□□ -0.98
COL12A1-201ENST00000322507 PRSS38A1L453 326 aa8.9□□□□□ -0.99
COL12A1-201ENST00000322507 NCR1O76036 304 aa8.9□□□□□ -0.99
COL12A1-201ENST00000322507 HTR1DP28221 377 aa8.9□□□□□ -0.99
COL12A1-201ENST00000322507 ZMYND19Q96E35 227 aaPredicted RBP8.9□□□□□ -0.99
COL12A1-201ENST00000322507 SLC23A2Q9UGH3 650 aa8.9□□□□□ -0.99
COL12A1-201ENST00000322507 OR52A1Q9UKL2 312 aa8.9□□□□□ -0.99
COL12A1-201ENST00000322507 DIMT1Q9UNQ2 313 aaKnown RBP8.9□□□□□ -0.99
COL12A1-201ENST00000322507 COL16A1Q07092 1604 aaPredicted RBP8.9□□□□□ -0.99
COL12A1-201ENST00000322507 SFTPCP11686 197 aa8.9□□□□□ -0.99
COL12A1-201ENST00000322507 CST5P28325 142 aaPredicted RBP8.9□□□□□ -0.99
COL12A1-201ENST00000322507 RAD52P43351 418 aa8.9□□□□□ -0.99
COL12A1-201ENST00000322507 SPRED1Q7Z699 444 aa8.9□□□□□ -0.99
COL12A1-201ENST00000322507 TOE1Q96GM8 510 aaKnown RBP8.9□□□□□ -0.99
COL12A1-201ENST00000322507 TRAF4Q9BUZ4 470 aaPredicted RBP8.9□□□□□ -0.99
COL12A1-201ENST00000322507 RBBP6Q7Z6E9 1792 aaKnown RBP8.9□□□□□ -0.99
COL12A1-201ENST00000322507 RRP8O43159 456 aaKnown RBP8.9□□□□□ -0.99
COL12A1-201ENST00000322507 NRASP01111 189 aa8.9□□□□□ -0.99
COL12A1-201ENST00000322507 HRASP01112 189 aa8.9□□□□□ -0.99
COL12A1-201ENST00000322507 KRASP01116 189 aa8.9□□□□□ -0.99
COL12A1-201ENST00000322507 FPR3P25089 353 aa8.9□□□□□ -0.99
COL12A1-201ENST00000322507 GABRA6Q16445 453 aa8.9□□□□□ -0.99
COL12A1-201ENST00000322507 RTN4IP1Q8WWV3 396 aaPredicted RBP8.9□□□□□ -0.99
COL12A1-201ENST00000322507 FBXW5Q969U6 566 aa8.9□□□□□ -0.99
COL12A1-201ENST00000322507 TOX2Q96NM4 488 aa8.9□□□□□ -0.99
COL12A1-201ENST00000322507 MARCH5Q9NX47 278 aa8.9□□□□□ -0.99
COL12A1-201ENST00000322507 CSAG2Q9Y5P2 127 aa8.9□□□□□ -0.99
COL12A1-201ENST00000322507 MYO7BQ6PIF6 2116 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 DBHP09172 617 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 ATXN1LP0C7T5 689 aaKnown RBP8.89□□□□□ -0.99
COL12A1-201ENST00000322507 RRASP10301 218 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 GABRR1P24046 479 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 RPS23P62266 143 aaKnown RBP8.89□□□□□ -0.99
COL12A1-201ENST00000322507 CFAP161Q6P656 301 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 Q6ZSR6 202 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 OPN4Q9UHM6 478 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 FAM221AA4D161 298 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 H3BMH7 237 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 SORBS2O94875 1100 aaKnown RBP8.89□□□□□ -0.99
COL12A1-201ENST00000322507 MT-ND6P03923 174 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 LRRC26Q2I0M4 334 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 WDR34Q96EX3 536 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 NAGKQ9UJ70 344 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 RCE1Q9Y256 329 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 USP3Q9Y6I4 520 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 GABRA4P48169 554 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 ZNF91Q05481 1191 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 VN1R3Q9BXE9 311 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 GIMAP2Q9UG22 337 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 ATAD5Q96QE3 1844 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 FCN1O00602 326 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 TNFSF11O14788 317 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 DPP4P27487 766 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 PCBP4P57723 403 aaKnown RBP8.89□□□□□ -0.99
COL12A1-201ENST00000322507 B3GNT8Q7Z7M8 397 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 ZPBPQ9BS86 351 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 ULBP2Q9BZM5 246 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 CRISPLD2Q9H0B8 497 aa8.89□□□□□ -0.99
COL12A1-201ENST00000322507 CD68P34810 354 aaPredicted RBP8.89□□□□□ -0.99
COL12A1-201ENST00000322507 MTCP1P56278 107 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms