RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 TAS2R31P59538 309 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 RIPPLY2Q5TAB7 128 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 ZNF517Q6ZMY9 492 aaPredicted RBP7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 TMPRSS7Q7RTY8 843 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 ADGRL4Q9HBW9 690 aa7.63□□□□□ -1.19
PDLIM5-201ENST00000317968 SH2D7A6NKC9 451 aaPredicted RBP7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 NOS1APO75052 506 aaPredicted RBP7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 CD96P40200 585 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 DLX5P56178 289 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 ACTBL2Q562R1 376 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 SERPINA12Q8IW75 414 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 OR10D3Q8NH80 312 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 RNF128Q8TEB7 428 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 HSD17B8Q92506 261 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 FOXB1Q99853 325 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 SLC6A15Q9H2J7 730 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 CHCHD2Q9Y6H1 151 aaPredicted RBP7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 EP300Q09472 2414 aaPredicted RBP7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 hCG_2014768A0A024R1R8 64 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 OR6C68A6NDL8 312 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 CALCBP10092 127 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 ALOX5APP20292 161 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 S100A10P60903 97 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 PMPCAQ10713 525 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 APOOLQ6UXV4 268 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 CCDC71Q8IV32 467 aaPredicted RBP7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 ZFP41Q8N8Y5 198 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 SLAMF6Q96DU3 332 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 PIK3IP1Q96FE7 263 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 ST8SIA5O15466 376 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 PRKNO60260 465 aaPredicted RBP7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 CNIH1O95406 144 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 CTSSP25774 331 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 BDKRB2P30411 391 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 TATDN3Q17R31 274 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 BEX5Q5H9J7 111 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 DCXRQ7Z4W1 244 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 ZNF695Q8IW36 515 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 OR13G1Q8NGZ3 307 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 DYNC2LI1Q8TCX1 351 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 DEDD2Q8WXF8 326 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 DPF1Q92782 380 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 SLC25A46Q96AG3 418 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 GPA33Q99795 319 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 TBC1D24Q9ULP9 559 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 A0A0A6YYH2 397 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 A6NJ64 397 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 M0R233 179 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 HOXB1P14653 301 aaPredicted RBP7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 ARSBP15848 533 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 CEACAM3P40198 252 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 LCN6P62502 163 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 RPS25P62851 125 aaKnown RBP7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 MRPS34P82930 218 aaKnown RBP7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 SPCS2Q15005 226 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 RNASE10Q5GAN6 216 aaKnown RBP7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 Q8IYB0 196 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 SPICQ8N5J4 248 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 OCEL1Q9H607 264 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 ELOVL5Q9NYP7 299 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 BORCS7-ASMTA0A0B4J1R7 106 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 H7C1C5 153 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 ETV2O00321 342 aaPredicted RBP7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 SELENOFO60613 162 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 IFNA2P01563 188 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 SERPINA2P20848 420 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 CDKN2AP42771 156 aaKnown RBP7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 TAS2R46P59540 309 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 SNX29P2Q8IUI4 249 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 PTP4A1Q93096 173 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 RFT1Q96AA3 541 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 C10orf35Q96D05 121 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 PIGLQ9Y2B2 252 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 CHST2Q9Y4C5 530 aa7.62□□□□□ -1.19
PDLIM5-201ENST00000317968 OGG1O15527 345 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 NPIPB7O75200 414 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 SUB1P53999 127 aaKnown RBP eCLIP7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 DRAM2Q6UX65 266 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 ZDHHC23Q8IYP9 409 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 BBS1Q8NFJ9 593 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 CMSS1Q9BQ75 279 aaKnown RBP7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 ABHD6Q9BV23 337 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 ACKR4Q9NPB9 350 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 CACFD1Q9UGQ2 172 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 URB1O60287 2271 aaKnown RBP7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 MAP1BP46821 2468 aaKnown RBP7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 IGKV1D-42A0A075B6H8 117 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 CRHP06850 196 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 PSMA6P60900 246 aaKnown RBP7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 SEC61A1P61619 476 aaKnown RBP7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 OR5AS1Q8N127 324 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 OR2G2Q8NGZ5 317 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 S100PBPQ96BU1 408 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 ATF6BQ99941 703 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 PTTG3PQ9NZH4 202 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 FOXJ2Q9P0K8 574 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 ONECUT1Q9UBC0 465 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 MSRB2Q9Y3D2 182 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 A0A096LPE4 126 aa7.61□□□□□ -1.19
PDLIM5-201ENST00000317968 A0A1W2PPZ6 126 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms