RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 SFTPDP35247 375 aa9.4□□□□□ -0.91
COL3A1-202ENST00000317840 DCAF7P61962 342 aa9.4□□□□□ -0.91
COL3A1-202ENST00000317840 CHAF1BQ13112 559 aa9.4□□□□□ -0.91
COL3A1-202ENST00000317840 EBPQ15125 230 aaKnown RBP9.4□□□□□ -0.91
COL3A1-202ENST00000317840 SWI5Q1ZZU3 235 aa9.4□□□□□ -0.91
COL3A1-202ENST00000317840 LY6G6FQ5SQ64 297 aa9.4□□□□□ -0.91
COL3A1-202ENST00000317840 GLIPR1L1Q6UWM5 242 aa9.4□□□□□ -0.91
COL3A1-202ENST00000317840 LANCL3Q6ZV70 420 aa9.4□□□□□ -0.91
COL3A1-202ENST00000317840 BIVMQ86UB2 503 aa9.4□□□□□ -0.91
COL3A1-202ENST00000317840 TMEM156Q8N614 296 aa9.4□□□□□ -0.91
COL3A1-202ENST00000317840 RNF166Q96A37 237 aaPredicted RBP9.4□□□□□ -0.91
COL3A1-202ENST00000317840 SLAMF6Q96DU3 332 aa9.4□□□□□ -0.91
COL3A1-202ENST00000317840 RAB3CQ96E17 227 aa9.4□□□□□ -0.91
COL3A1-202ENST00000317840 MMACHCQ9Y4U1 282 aa9.4□□□□□ -0.91
COL3A1-202ENST00000317840 FANCMQ8IYD8 2048 aa9.4□□□□□ -0.91
COL3A1-202ENST00000317840 SDCBPO00560 298 aaPredicted RBP9.39□□□□□ -0.91
COL3A1-202ENST00000317840 FBXO24O75426 580 aa9.39□□□□□ -0.91
COL3A1-202ENST00000317840 ICAM2P13598 275 aa9.39□□□□□ -0.91
COL3A1-202ENST00000317840 CLDN6P56747 220 aa9.39□□□□□ -0.91
COL3A1-202ENST00000317840 LCN10Q6JVE6 187 aa9.39□□□□□ -0.91
COL3A1-202ENST00000317840 GUSBP11Q6P575 273 aa9.39□□□□□ -0.91
COL3A1-202ENST00000317840 OR1M1Q8NGA1 313 aa9.39□□□□□ -0.91
COL3A1-202ENST00000317840 OR13C8Q8NGS7 320 aa9.39□□□□□ -0.91
COL3A1-202ENST00000317840 MAFIPQ8WZ33 124 aa9.39□□□□□ -0.91
COL3A1-202ENST00000317840 DEFB126Q9BYW3 111 aa9.39□□□□□ -0.91
COL3A1-202ENST00000317840 WWTR1Q9GZV5 400 aa9.39□□□□□ -0.91
COL3A1-202ENST00000317840 C1orf198Q9H425 327 aa9.39□□□□□ -0.91
COL3A1-202ENST00000317840 SDHAF3Q9NRP4 125 aa9.39□□□□□ -0.91
COL3A1-202ENST00000317840 MED9Q9NWA0 146 aa9.39□□□□□ -0.91
COL3A1-202ENST00000317840 TNFSF18Q9UNG2 199 aa9.39□□□□□ -0.91
COL3A1-202ENST00000317840 RPH3AQ9Y2J0 694 aaPredicted RBP9.39□□□□□ -0.91
COL3A1-202ENST00000317840 ALG1L2C9J202 215 aa9.39□□□□□ -0.91
COL3A1-202ENST00000317840 PLPP3O14495 311 aa9.39□□□□□ -0.91
COL3A1-202ENST00000317840 ABOP16442 354 aa9.39□□□□□ -0.91
COL3A1-202ENST00000317840 ZNF41P51814 821 aaPredicted RBP9.39□□□□□ -0.91
COL3A1-202ENST00000317840 CSNK2A1P68400 391 aaPredicted RBP9.39□□□□□ -0.91
COL3A1-202ENST00000317840 HSF1Q00613 529 aa9.39□□□□□ -0.91
COL3A1-202ENST00000317840 ADAD2Q8NCV1 583 aaKnown RBP9.39□□□□□ -0.91
COL3A1-202ENST00000317840 CSNK2A3Q8NEV1 391 aa9.39□□□□□ -0.91
COL3A1-202ENST00000317840 MAFAQ8NHW3 353 aaPredicted RBP9.39□□□□□ -0.91
COL3A1-202ENST00000317840 CNTNAP3BQ96NU0 1288 aa9.39□□□□□ -0.91
COL3A1-202ENST00000317840 ADAM19Q9H013 955 aa9.39□□□□□ -0.91
COL3A1-202ENST00000317840 CTSFQ9UBX1 484 aa9.39□□□□□ -0.91
COL3A1-202ENST00000317840 MRPS28Q9Y2Q9 187 aaKnown RBP9.39□□□□□ -0.91
COL3A1-202ENST00000317840 ZNF726A6NNF4 738 aa9.39□□□□□ -0.91
COL3A1-202ENST00000317840 IFI6P09912 130 aa9.39□□□□□ -0.91
COL3A1-202ENST00000317840 CYCSP99999 105 aaKnown RBP9.39□□□□□ -0.91
COL3A1-202ENST00000317840 SGCAQ16586 387 aa9.39□□□□□ -0.91
COL3A1-202ENST00000317840 JMJD6Q6NYC1 403 aaPredicted RBP9.39□□□□□ -0.91
COL3A1-202ENST00000317840 TFAP2EQ6VUC0 442 aa9.39□□□□□ -0.91
COL3A1-202ENST00000317840 H1FNTQ75WM6 255 aaPredicted RBP9.39□□□□□ -0.91
COL3A1-202ENST00000317840 PNLDC1Q8NA58 520 aaKnown RBP9.39□□□□□ -0.91
COL3A1-202ENST00000317840 HOXB13Q92826 284 aaPredicted RBP9.39□□□□□ -0.91
COL3A1-202ENST00000317840 TMEM59Q9BXS4 323 aa9.39□□□□□ -0.91
COL3A1-202ENST00000317840 FBXO9Q9UK97 447 aaPredicted RBP9.39□□□□□ -0.91
COL3A1-202ENST00000317840 IGLV1-36A0A0B4J1U3 117 aa9.38□□□□□ -0.91
COL3A1-202ENST00000317840 TEX13DA0A0J9YY54 714 aaPredicted RBP9.38□□□□□ -0.91
COL3A1-202ENST00000317840 LOC101059948A0A1B0GTJ6 334 aa9.38□□□□□ -0.91
COL3A1-202ENST00000317840 A0A1B0GTQ1 180 aa9.38□□□□□ -0.91
COL3A1-202ENST00000317840 TRIM77I1YAP6 450 aa9.38□□□□□ -0.91
COL3A1-202ENST00000317840 MECP2P51608 486 aaKnown RBP9.38□□□□□ -0.91
COL3A1-202ENST00000317840 PPIAP62937 165 aaKnown RBP9.38□□□□□ -0.91
COL3A1-202ENST00000317840 IGLV3-21P80748 117 aaPredicted RBP9.38□□□□□ -0.91
COL3A1-202ENST00000317840 SCRN3Q0VDG4 424 aa9.38□□□□□ -0.91
COL3A1-202ENST00000317840 SMCO1Q147U7 214 aa9.38□□□□□ -0.91
COL3A1-202ENST00000317840 BAP18Q8IXM2 172 aa9.38□□□□□ -0.91
COL3A1-202ENST00000317840 C9orf40Q8IXQ3 194 aa9.38□□□□□ -0.91
COL3A1-202ENST00000317840 OR52H1Q8NGJ2 320 aa9.38□□□□□ -0.91
COL3A1-202ENST00000317840 RPS4Y2Q8TD47 263 aa9.38□□□□□ -0.91
COL3A1-202ENST00000317840 RNF141Q8WVD5 230 aa9.38□□□□□ -0.91
COL3A1-202ENST00000317840 LIPHQ8WWY8 451 aa9.38□□□□□ -0.91
COL3A1-202ENST00000317840 NPAS1Q99742 590 aa9.38□□□□□ -0.91
COL3A1-202ENST00000317840 URM1Q9BTM9 101 aaKnown RBP9.38□□□□□ -0.91
COL3A1-202ENST00000317840 SMIM3Q9BZL3 60 aa9.38□□□□□ -0.91
COL3A1-202ENST00000317840 ADAP1O75689 374 aa9.38□□□□□ -0.91
COL3A1-202ENST00000317840 WISP1O95388 367 aa9.38□□□□□ -0.91
COL3A1-202ENST00000317840 F12P00748 615 aaPredicted RBP9.38□□□□□ -0.91
COL3A1-202ENST00000317840 GP1BAP07359 652 aa9.38□□□□□ -0.91
COL3A1-202ENST00000317840 IKZF1Q13422 519 aa9.38□□□□□ -0.91
COL3A1-202ENST00000317840 FAM76BQ5HYJ3 339 aa9.38□□□□□ -0.91
COL3A1-202ENST00000317840 CBLN2Q8IUK8 224 aa9.38□□□□□ -0.91
COL3A1-202ENST00000317840 ASB13Q8WXK3 278 aa9.38□□□□□ -0.91
COL3A1-202ENST00000317840 PPP4R1LQ9P1A2 415 aa9.38□□□□□ -0.91
COL3A1-202ENST00000317840 ZNF629Q9UEG4 869 aaPredicted RBP9.38□□□□□ -0.91
COL3A1-202ENST00000317840 F5H5K5 113 aa9.38□□□□□ -0.91
COL3A1-202ENST00000317840 RAB27BO00194 218 aa9.38□□□□□ -0.91
COL3A1-202ENST00000317840 SERPINA5P05154 406 aa9.38□□□□□ -0.91
COL3A1-202ENST00000317840 OTX2P32243 289 aa9.38□□□□□ -0.91
COL3A1-202ENST00000317840 INPP5JQ15735 1006 aaPredicted RBP9.38□□□□□ -0.91
COL3A1-202ENST00000317840 CHRFAM7AQ494W8 412 aa9.38□□□□□ -0.91
COL3A1-202ENST00000317840 PRAMEF20Q5VT98 475 aa9.38□□□□□ -0.91
COL3A1-202ENST00000317840 ZSCAN1Q8NBB4 408 aa9.38□□□□□ -0.91
COL3A1-202ENST00000317840 OR51T1Q8NGJ9 327 aa9.38□□□□□ -0.91
COL3A1-202ENST00000317840 C2CD4CQ8TF44 421 aa9.38□□□□□ -0.91
COL3A1-202ENST00000317840 C11orf40Q8WZ69 217 aa9.38□□□□□ -0.91
COL3A1-202ENST00000317840 PBOV1Q9GZY1 135 aa9.38□□□□□ -0.91
COL3A1-202ENST00000317840 ASH2LQ9UBL3 628 aa9.38□□□□□ -0.91
COL3A1-202ENST00000317840 CLDN16Q9Y5I7 305 aa9.38□□□□□ -0.91
COL3A1-202ENST00000317840 TRIOO75962 3097 aa9.38□□□□□ -0.91
COL3A1-202ENST00000317840 A0A0A6YYH2 397 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms