RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 ZNF416Q9BWM5 594 aa18.2■□□□□ 0.5
TTC39C-202ENST00000317571 ZNF160Q9HCG1 818 aa18.2■□□□□ 0.5
TTC39C-202ENST00000317571 CNTRLQ7Z7A1 2325 aa18.2■□□□□ 0.5
TTC39C-202ENST00000317571 LOC105371267A0A1B0GV96 52 aa18.2■□□□□ 0.5
TTC39C-202ENST00000317571 CD63P08962 238 aa18.2■□□□□ 0.5
TTC39C-202ENST00000317571 HOXD11P31277 338 aaPredicted RBP18.2■□□□□ 0.5
TTC39C-202ENST00000317571 ATPAF1Q5TC12 328 aaPredicted RBP18.2■□□□□ 0.5
TTC39C-202ENST00000317571 TMEM81Q6P7N7 255 aa18.2■□□□□ 0.5
TTC39C-202ENST00000317571 OPN5Q6U736 354 aa18.2■□□□□ 0.5
TTC39C-202ENST00000317571 OR2Y1Q8NGV0 311 aa18.2■□□□□ 0.5
TTC39C-202ENST00000317571 PAQR8Q8TEZ7 354 aa18.2■□□□□ 0.5
TTC39C-202ENST00000317571 KCNN3Q9UGI6 736 aa18.2■□□□□ 0.5
TTC39C-202ENST00000317571 NCKAP5O14513 1909 aa18.19■□□□□ 0.5
TTC39C-202ENST00000317571 A0A0A6YYD4 124 aa18.19■□□□□ 0.5
TTC39C-202ENST00000317571 UBE2QL1A1L167 161 aa18.19■□□□□ 0.5
TTC39C-202ENST00000317571 ZNF726A6NNF4 738 aa18.19■□□□□ 0.5
TTC39C-202ENST00000317571 ZNF736B4DX44 427 aaPredicted RBP18.19■□□□□ 0.5
TTC39C-202ENST00000317571 PMS2P2O95744 297 aa18.19■□□□□ 0.5
TTC39C-202ENST00000317571 CSN2P05814 226 aa18.19■□□□□ 0.5
TTC39C-202ENST00000317571 RAB3AP20336 220 aa18.19■□□□□ 0.5
TTC39C-202ENST00000317571 CX3CR1P49238 355 aa18.19■□□□□ 0.5
TTC39C-202ENST00000317571 FAM71F1Q96KD3 344 aaPredicted RBP18.19■□□□□ 0.5
TTC39C-202ENST00000317571 FARSAQ9Y285 508 aaKnown RBP18.19■□□□□ 0.5
TTC39C-202ENST00000317571 PCSK5Q92824 1860 aa18.19■□□□□ 0.5
TTC39C-202ENST00000317571 KIAA1549Q9HCM3 1950 aa18.19■□□□□ 0.5
TTC39C-202ENST00000317571 TMEM82A0PJX8 343 aa18.19■□□□□ 0.5
TTC39C-202ENST00000317571 OR14I1A6ND48 311 aa18.19■□□□□ 0.5
TTC39C-202ENST00000317571 TMEM14DPA8MWL7 114 aa18.19■□□□□ 0.5
TTC39C-202ENST00000317571 MCRIP1C9JLW8 97 aa18.19■□□□□ 0.5
TTC39C-202ENST00000317571 L7N2F9 121 aa18.19■□□□□ 0.5
TTC39C-202ENST00000317571 BPNT1O95861 308 aa18.19■□□□□ 0.5
TTC39C-202ENST00000317571 CYB5AP00167 134 aa18.19■□□□□ 0.5
TTC39C-202ENST00000317571 EXT1Q16394 746 aa18.19■□□□□ 0.5
TTC39C-202ENST00000317571 NKPD1Q17RQ9 610 aa18.19■□□□□ 0.5
TTC39C-202ENST00000317571 C4orf46Q504U0 113 aa18.19■□□□□ 0.5
TTC39C-202ENST00000317571 RAET1LQ5VY80 246 aa18.19■□□□□ 0.5
TTC39C-202ENST00000317571 OR52W1Q6IF63 320 aa18.19■□□□□ 0.5
TTC39C-202ENST00000317571 TMEM104Q8NE00 496 aa18.19■□□□□ 0.5
TTC39C-202ENST00000317571 OR5D14Q8NGL3 314 aa18.19■□□□□ 0.5
TTC39C-202ENST00000317571 M1APQ8TC57 530 aa18.19■□□□□ 0.5
TTC39C-202ENST00000317571 JSRP1Q96MG2 331 aaPredicted RBP18.19■□□□□ 0.5
TTC39C-202ENST00000317571 UQCC2Q9BRT2 126 aa18.19■□□□□ 0.5
TTC39C-202ENST00000317571 TMPRSS13Q9BYE2 586 aa18.19■□□□□ 0.5
TTC39C-202ENST00000317571 FBXO4Q9UKT5 387 aa18.19■□□□□ 0.5
TTC39C-202ENST00000317571 NUP50Q9UKX7 468 aa18.19■□□□□ 0.5
TTC39C-202ENST00000317571 ZDBF2Q9HCK1 2354 aa18.19■□□□□ 0.5
TTC39C-202ENST00000317571 A0A0G2JMM0 328 aa18.18■□□□□ 0.5
TTC39C-202ENST00000317571 A0A1W2PPB8 328 aa18.18■□□□□ 0.5
TTC39C-202ENST00000317571 A0A1W2PRS3 328 aa18.18■□□□□ 0.5
TTC39C-202ENST00000317571 KIR3DP1A8MWS1 328 aa18.18■□□□□ 0.5
TTC39C-202ENST00000317571 B8ZZF3 427 aa18.18■□□□□ 0.5
TTC39C-202ENST00000317571 RGS11O94810 467 aa18.18■□□□□ 0.5
TTC39C-202ENST00000317571 OR4E1P0C645 316 aa18.18■□□□□ 0.5
TTC39C-202ENST00000317571 GNB3P16520 340 aa18.18■□□□□ 0.5
TTC39C-202ENST00000317571 ZNF93P35789 620 aaPredicted RBP18.18■□□□□ 0.5
TTC39C-202ENST00000317571 TAF13Q15543 124 aa18.18■□□□□ 0.5
TTC39C-202ENST00000317571 CDNFQ49AH0 187 aa18.18■□□□□ 0.5
TTC39C-202ENST00000317571 FAM57BQ71RH2 274 aa18.18■□□□□ 0.5
TTC39C-202ENST00000317571 TMED4Q7Z7H5 227 aa18.18■□□□□ 0.5
TTC39C-202ENST00000317571 ANGPTL5Q86XS5 388 aa18.18■□□□□ 0.5
TTC39C-202ENST00000317571 BPIFB2Q8N4F0 458 aa18.18■□□□□ 0.5
TTC39C-202ENST00000317571 EDEM2Q9BV94 578 aa18.18■□□□□ 0.5
TTC39C-202ENST00000317571 ALX4Q9H161 411 aaPredicted RBP18.18■□□□□ 0.5
TTC39C-202ENST00000317571 MOB1AQ9H8S9 216 aa18.18■□□□□ 0.5
TTC39C-202ENST00000317571 ZNF224Q9NZL3 707 aa18.18■□□□□ 0.5
TTC39C-202ENST00000317571 A0A1W2PP11 408 aa18.18■□□□□ 0.5
TTC39C-202ENST00000317571 LAMTOR5O43504 91 aa18.18■□□□□ 0.5
TTC39C-202ENST00000317571 NFYAP23511 347 aaPredicted RBP18.18■□□□□ 0.5
TTC39C-202ENST00000317571 SSR4P51571 173 aa18.18■□□□□ 0.5
TTC39C-202ENST00000317571 RPS18P62269 152 aaKnown RBP18.18■□□□□ 0.5
TTC39C-202ENST00000317571 RSPO4Q2I0M5 234 aaPredicted RBP18.18■□□□□ 0.5
TTC39C-202ENST00000317571 GFOD2Q3B7J2 385 aa18.18■□□□□ 0.5
TTC39C-202ENST00000317571 NHLRC3Q5JS37 347 aa18.18■□□□□ 0.5
TTC39C-202ENST00000317571 LY6G6FQ5SQ64 297 aa18.18■□□□□ 0.5
TTC39C-202ENST00000317571 AWAT2Q6E213 333 aa18.18■□□□□ 0.5
TTC39C-202ENST00000317571 TMEM65Q6PI78 240 aa18.18■□□□□ 0.5
TTC39C-202ENST00000317571 RHOUQ7L0Q8 258 aa18.18■□□□□ 0.5
TTC39C-202ENST00000317571 TRAPPC6BQ86SZ2 158 aa18.18■□□□□ 0.5
TTC39C-202ENST00000317571 COMMD2Q86X83 199 aa18.18■□□□□ 0.5
TTC39C-202ENST00000317571 TNFAIP8L1Q8WVP5 186 aa18.18■□□□□ 0.5
TTC39C-202ENST00000317571 SLC39A7Q92504 469 aa18.18■□□□□ 0.5
TTC39C-202ENST00000317571 SLCO5A1Q9H2Y9 848 aa18.18■□□□□ 0.5
TTC39C-202ENST00000317571 A0A087WZY1 265 aa18.17■□□□□ 0.5
TTC39C-202ENST00000317571 PMS2P1A4D2B8 440 aa18.17■□□□□ 0.5
TTC39C-202ENST00000317571 C9J4A7 227 aa18.17■□□□□ 0.5
TTC39C-202ENST00000317571 SSX5O60225 188 aa18.17■□□□□ 0.5
TTC39C-202ENST00000317571 CCL1P22362 96 aa18.17■□□□□ 0.5
TTC39C-202ENST00000317571 OR3A4PP47883 348 aa18.17■□□□□ 0.5
TTC39C-202ENST00000317571 TRA2AQ13595 282 aaKnown RBP eCLIP18.17■□□□□ 0.5
TTC39C-202ENST00000317571 ENDOGQ14249 297 aaKnown RBP18.17■□□□□ 0.5
TTC39C-202ENST00000317571 SGCAQ16586 387 aa18.17■□□□□ 0.5
TTC39C-202ENST00000317571 CRIP3Q6Q6R5 217 aa18.17■□□□□ 0.5
TTC39C-202ENST00000317571 C3P1Q6ZMU1 363 aa18.17■□□□□ 0.5
TTC39C-202ENST00000317571 HDDC2Q7Z4H3 204 aa18.17■□□□□ 0.5
TTC39C-202ENST00000317571 CD163Q86VB7 1156 aa18.17■□□□□ 0.5
TTC39C-202ENST00000317571 RPS19BP1Q86WX3 136 aaKnown RBP18.17■□□□□ 0.5
TTC39C-202ENST00000317571 CDH26Q8IXH8 852 aa18.17■□□□□ 0.5
TTC39C-202ENST00000317571 CHST4Q8NCG5 386 aa18.17■□□□□ 0.5
TTC39C-202ENST00000317571 NABP1Q96AH0 204 aa18.17■□□□□ 0.5
TTC39C-202ENST00000317571 LYZL4Q96KX0 146 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms