RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 SELENOVP59797 346 aa10.19□□□□□ -0.78
SCFD1-201ENST00000311943 ELF3P78545 371 aaPredicted RBP10.19□□□□□ -0.78
SCFD1-201ENST00000311943 MAB21L1Q13394 359 aa10.19□□□□□ -0.78
SCFD1-201ENST00000311943 MPPED2Q15777 294 aa10.19□□□□□ -0.78
SCFD1-201ENST00000311943 PRAMEF6Q5VXH4 476 aa10.19□□□□□ -0.78
SCFD1-201ENST00000311943 IL17RELQ6ZVW7 336 aa10.19□□□□□ -0.78
SCFD1-201ENST00000311943 SLC16A9Q7RTY1 509 aa10.19□□□□□ -0.78
SCFD1-201ENST00000311943 ENTHD1Q8IYW4 607 aa10.19□□□□□ -0.78
SCFD1-201ENST00000311943 SNX33Q8WV41 574 aa10.19□□□□□ -0.78
SCFD1-201ENST00000311943 STMN2Q93045 179 aa10.19□□□□□ -0.78
SCFD1-201ENST00000311943 HRASLS5Q96KN8 279 aa10.19□□□□□ -0.78
SCFD1-201ENST00000311943 OR2V2Q96R30 315 aa10.19□□□□□ -0.78
SCFD1-201ENST00000311943 DCLRE1CQ96SD1 692 aaKnown RBP10.19□□□□□ -0.78
SCFD1-201ENST00000311943 SAP30LQ9HAJ7 183 aa10.19□□□□□ -0.78
SCFD1-201ENST00000311943 LAMP5Q9UJQ1 280 aa10.19□□□□□ -0.78
SCFD1-201ENST00000311943 DYSFO75923 2080 aa10.19□□□□□ -0.78
SCFD1-201ENST00000311943 IGHV1-69-2A0A0G2JMI3 117 aa10.19□□□□□ -0.78
SCFD1-201ENST00000311943 PPIHO43447 177 aaKnown RBP10.19□□□□□ -0.78
SCFD1-201ENST00000311943 IGHV4-31P0DP07 118 aa10.19□□□□□ -0.78
SCFD1-201ENST00000311943 RAC2P15153 192 aa10.19□□□□□ -0.78
SCFD1-201ENST00000311943 ACKR3P25106 362 aa10.19□□□□□ -0.78
SCFD1-201ENST00000311943 TNFAIP6P98066 277 aaPredicted RBP10.19□□□□□ -0.78
SCFD1-201ENST00000311943 ODF4Q2M2E3 257 aa10.19□□□□□ -0.78
SCFD1-201ENST00000311943 ARL9Q6T311 187 aa10.19□□□□□ -0.78
SCFD1-201ENST00000311943 PGAP1Q75T13 922 aa10.19□□□□□ -0.78
SCFD1-201ENST00000311943 SLC35F2Q8IXU6 374 aa10.19□□□□□ -0.78
SCFD1-201ENST00000311943 OR56B2PQ8NGI1 322 aa10.19□□□□□ -0.78
SCFD1-201ENST00000311943 APH1BQ8WW43 257 aa10.19□□□□□ -0.78
SCFD1-201ENST00000311943 SPTSSAQ969W0 71 aa10.19□□□□□ -0.78
SCFD1-201ENST00000311943 DECR2Q9NUI1 292 aa10.19□□□□□ -0.78
SCFD1-201ENST00000311943 FAM118AQ9NWS6 357 aa10.19□□□□□ -0.78
SCFD1-201ENST00000311943 ATPIF1Q9UII2 106 aa10.19□□□□□ -0.78
SCFD1-201ENST00000311943 A0A1W2PQL4 384 aaPredicted RBP10.18□□□□□ -0.78
SCFD1-201ENST00000311943 CD300LBA8K4G0 201 aa10.18□□□□□ -0.78
SCFD1-201ENST00000311943 FAM157AC9JC47 383 aa10.18□□□□□ -0.78
SCFD1-201ENST00000311943 SBK2P0C263 348 aa10.18□□□□□ -0.78
SCFD1-201ENST00000311943 ZNF16P17020 682 aaPredicted RBP10.18□□□□□ -0.78
SCFD1-201ENST00000311943 GABRB1P18505 474 aa10.18□□□□□ -0.78
SCFD1-201ENST00000311943 USF1P22415 310 aaPredicted RBP10.18□□□□□ -0.78
SCFD1-201ENST00000311943 FAM3AP98173 230 aa10.18□□□□□ -0.78
SCFD1-201ENST00000311943 GABPB1Q06547 395 aaPredicted RBP10.18□□□□□ -0.78
SCFD1-201ENST00000311943 CDK5R2Q13319 367 aa10.18□□□□□ -0.78
SCFD1-201ENST00000311943 SLC35D3Q5M8T2 416 aa10.18□□□□□ -0.78
SCFD1-201ENST00000311943 DRAM2Q6UX65 266 aa10.18□□□□□ -0.78
SCFD1-201ENST00000311943 OR8G5Q8NG78 346 aa10.18□□□□□ -0.78
SCFD1-201ENST00000311943 OR8B12Q8NGG6 310 aa10.18□□□□□ -0.78
SCFD1-201ENST00000311943 NRG4Q8WWG1 115 aa10.18□□□□□ -0.78
SCFD1-201ENST00000311943 RDH5Q92781 318 aa10.18□□□□□ -0.78
SCFD1-201ENST00000311943 MSI2Q96DH6 328 aaKnown RBP10.18□□□□□ -0.78
SCFD1-201ENST00000311943 CNN2Q99439 309 aaKnown RBP10.18□□□□□ -0.78
SCFD1-201ENST00000311943 PIMREGQ9BSJ6 248 aa10.18□□□□□ -0.78
SCFD1-201ENST00000311943 REPIN1Q9BWE0 567 aaKnown RBP10.18□□□□□ -0.78
SCFD1-201ENST00000311943 FGF23Q9GZV9 251 aaPredicted RBP10.18□□□□□ -0.78
SCFD1-201ENST00000311943 UFSP2Q9NUQ7 469 aa10.18□□□□□ -0.78
SCFD1-201ENST00000311943 MRM2Q9UI43 246 aaKnown RBP10.18□□□□□ -0.78
SCFD1-201ENST00000311943 LOC100289279A0A1B0GTE1 492 aa10.17□□□□□ -0.78
SCFD1-201ENST00000311943 IQCF6A8MYZ5 107 aa10.17□□□□□ -0.78
SCFD1-201ENST00000311943 RPP14O95059 124 aaKnown RBP10.17□□□□□ -0.78
SCFD1-201ENST00000311943 CYB5R3P00387 301 aaPredicted RBP10.17□□□□□ -0.78
SCFD1-201ENST00000311943 GNAO1P09471 354 aa10.17□□□□□ -0.78
SCFD1-201ENST00000311943 CRYBB2P43320 205 aa10.17□□□□□ -0.78
SCFD1-201ENST00000311943 ECH1Q13011 328 aa10.17□□□□□ -0.78
SCFD1-201ENST00000311943 ZNF826PQ6ZT77 177 aa10.17□□□□□ -0.78
SCFD1-201ENST00000311943 MRPL21Q7Z2W9 205 aaKnown RBP10.17□□□□□ -0.78
SCFD1-201ENST00000311943 KRT77Q7Z794 578 aa10.17□□□□□ -0.78
SCFD1-201ENST00000311943 WDR86Q86TI4 376 aa10.17□□□□□ -0.78
SCFD1-201ENST00000311943 BIVMQ86UB2 503 aa10.17□□□□□ -0.78
SCFD1-201ENST00000311943 CLDND2Q8NHS1 167 aa10.17□□□□□ -0.78
SCFD1-201ENST00000311943 RNF166Q96A37 237 aaPredicted RBP10.17□□□□□ -0.78
SCFD1-201ENST00000311943 SLC30A2Q9BRI3 323 aa10.17□□□□□ -0.78
SCFD1-201ENST00000311943 C9orf16Q9BUW7 83 aa10.17□□□□□ -0.78
SCFD1-201ENST00000311943 H2AFY2Q9P0M6 372 aaPredicted RBP10.17□□□□□ -0.78
SCFD1-201ENST00000311943 IKZF2Q9UKS7 526 aa10.17□□□□□ -0.78
SCFD1-201ENST00000311943 SLC22A13Q9Y226 551 aa10.17□□□□□ -0.78
SCFD1-201ENST00000311943 MYRFQ9Y2G1 1151 aa10.17□□□□□ -0.78
SCFD1-201ENST00000311943 GMPPBQ9Y5P6 360 aa10.17□□□□□ -0.78
SCFD1-201ENST00000311943 LMX1BO60663 402 aa10.17□□□□□ -0.78
SCFD1-201ENST00000311943 FOSL1P15407 271 aa10.17□□□□□ -0.78
SCFD1-201ENST00000311943 HOXB4P17483 251 aaPredicted RBP10.17□□□□□ -0.78
SCFD1-201ENST00000311943 GIFP27352 417 aa10.17□□□□□ -0.78
SCFD1-201ENST00000311943 PSMB10P40306 273 aa10.17□□□□□ -0.78
SCFD1-201ENST00000311943 RGS6P49758 472 aa10.17□□□□□ -0.78
SCFD1-201ENST00000311943 BLVRAP53004 296 aa10.17□□□□□ -0.78
SCFD1-201ENST00000311943 SEC61A1P61619 476 aaKnown RBP10.17□□□□□ -0.78
SCFD1-201ENST00000311943 ZNF85Q03923 595 aa10.17□□□□□ -0.78
SCFD1-201ENST00000311943 POU4F2Q12837 409 aa10.17□□□□□ -0.78
SCFD1-201ENST00000311943 OR8J1Q8NGP2 316 aa10.17□□□□□ -0.78
SCFD1-201ENST00000311943 CNIH3Q8TBE1 160 aa10.17□□□□□ -0.78
SCFD1-201ENST00000311943 SEH1LQ96EE3 360 aa10.17□□□□□ -0.78
SCFD1-201ENST00000311943 REEP6Q96HR9 211 aa10.17□□□□□ -0.78
SCFD1-201ENST00000311943 OR8B4Q96RC9 309 aa10.17□□□□□ -0.78
SCFD1-201ENST00000311943 SIGLEC11Q96RL6 698 aa10.17□□□□□ -0.78
SCFD1-201ENST00000311943 METTL17Q9H7H0 456 aaPredicted RBP10.17□□□□□ -0.78
SCFD1-201ENST00000311943 CHODLQ9H9P2 273 aa10.17□□□□□ -0.78
SCFD1-201ENST00000311943 FAM206AQ9NX38 181 aa10.17□□□□□ -0.78
SCFD1-201ENST00000311943 WIPI2Q9Y4P8 454 aa10.17□□□□□ -0.78
SCFD1-201ENST00000311943 LOC100130705A0A1B0GUX0 176 aa10.16□□□□□ -0.78
SCFD1-201ENST00000311943 SRSF10O75494 262 aaKnown RBP10.16□□□□□ -0.78
SCFD1-201ENST00000311943 HEXAP06865 529 aa10.16□□□□□ -0.78
SCFD1-201ENST00000311943 HTR1FP30939 366 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms