RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 STAG3L3P0CL85 134 aa9.45□□□□□ -0.9
MSRB3-201ENST00000308259 NDUFV2P19404 249 aa9.45□□□□□ -0.9
MSRB3-201ENST00000308259 CD1CP29017 333 aa9.45□□□□□ -0.9
MSRB3-201ENST00000308259 CD81P60033 236 aa9.45□□□□□ -0.9
MSRB3-201ENST00000308259 HERPUD1Q15011 391 aa9.45□□□□□ -0.9
MSRB3-201ENST00000308259 C1orf87Q8N0U7 546 aa9.45□□□□□ -0.9
MSRB3-201ENST00000308259 LINC00471Q8N535 108 aa9.45□□□□□ -0.9
MSRB3-201ENST00000308259 C17orf47Q8NEP4 570 aa9.45□□□□□ -0.9
MSRB3-201ENST00000308259 LCN9Q8WX39 176 aa9.45□□□□□ -0.9
MSRB3-201ENST00000308259 GAL3ST2Q9H3Q3 398 aa9.45□□□□□ -0.9
MSRB3-201ENST00000308259 HINT3Q9NQE9 182 aaKnown RBP9.45□□□□□ -0.9
MSRB3-201ENST00000308259 PADI1Q9ULC6 663 aa9.45□□□□□ -0.9
MSRB3-201ENST00000308259 HSF4Q9ULV5 492 aa9.45□□□□□ -0.9
MSRB3-201ENST00000308259 SLC7A7Q9UM01 511 aa9.45□□□□□ -0.9
MSRB3-201ENST00000308259 LSM5Q9Y4Y9 91 aaKnown RBP9.45□□□□□ -0.9
MSRB3-201ENST00000308259 HNRNPA2B1P22626 353 aaKnown RBP9.44□□□□□ -0.9
MSRB3-201ENST00000308259 CMPK1P30085 196 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 SSPNQ14714 243 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 RNF44Q7L0R7 432 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 C17orf78Q8N4C9 275 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 BMPERQ8N8U9 685 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 SDR9C7Q8NEX9 313 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 BPIFA2Q96DR5 249 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 SERINC2Q96SA4 455 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 MCHR1Q99705 422 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 SNHG12Q9BXW3 62 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 EPHX3Q9H6B9 360 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 MEMO1Q9Y316 297 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 ALPK2Q86TB3 2170 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 LAMA1P25391 3075 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 C17orf105B2RV13 164 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 PRAMEF26H0Y7S4 382 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 SERPINA7P05543 415 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 RAB40ALP0C0E4 278 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 METTL15P1P0C7V9 234 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 CD37P11049 281 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 DBX2Q6ZNG2 339 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 SYT13Q7L8C5 426 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 HSD17B11Q8NBQ5 300 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 OR2A1Q8NGT9 310 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 RAB40AQ8WXH6 277 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 ASB17Q8WXJ9 295 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 CDS1Q92903 461 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 NIPSNAP3BQ9BS92 247 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 SLC17A9Q9BYT1 436 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 TMEM74BQ9NUR3 256 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 MED17Q9NVC6 651 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 MTCL1Q9Y4B5 1905 aaKnown RBP9.44□□□□□ -0.9
MSRB3-201ENST00000308259 BORCS7-ASMTA0A0B4J1R7 106 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 KDM4EB2RXH2 506 aaPredicted RBP9.44□□□□□ -0.9
MSRB3-201ENST00000308259 RDH16O75452 317 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 PGA3P0DJD8 388 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 SLC26A5P58743 744 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 PAX5Q02548 391 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 ST3GAL3Q11203 375 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 METRNLQ641Q3 311 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 TMEM184AQ6ZMB5 413 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 ZNF100Q8IYN0 542 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 OR9K2Q8NGE7 335 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 OR8U1Q8NH10 309 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 PFN4Q8NHR9 129 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 HAS2Q92819 552 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 FGF11Q92914 225 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 FAAP24Q9BTP7 215 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 SPTBP11277 2137 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 COL4A3Q01955 1670 aa9.44□□□□□ -0.9
MSRB3-201ENST00000308259 PET100P0DJ07 73 aa9.43□□□□□ -0.9
MSRB3-201ENST00000308259 EFNB1P98172 346 aa9.43□□□□□ -0.9
MSRB3-201ENST00000308259 CYCSP99999 105 aaKnown RBP9.43□□□□□ -0.9
MSRB3-201ENST00000308259 MESTQ5EB52 335 aa9.43□□□□□ -0.9
MSRB3-201ENST00000308259 TOMM20LQ6UXN7 152 aa9.43□□□□□ -0.9
MSRB3-201ENST00000308259 TMPRSS11FQ6ZWK6 438 aa9.43□□□□□ -0.9
MSRB3-201ENST00000308259 C19orf47Q8N9M1 422 aaKnown RBP9.43□□□□□ -0.9
MSRB3-201ENST00000308259 GPR119Q8TDV5 335 aa9.43□□□□□ -0.9
MSRB3-201ENST00000308259 TMEM18Q96B42 140 aa9.43□□□□□ -0.9
MSRB3-201ENST00000308259 MOAP1Q96BY2 351 aa9.43□□□□□ -0.9
MSRB3-201ENST00000308259 PIK3IP1Q96FE7 263 aa9.43□□□□□ -0.9
MSRB3-201ENST00000308259 PRRX2Q99811 253 aa9.43□□□□□ -0.9
MSRB3-201ENST00000308259 NRIP3Q9NQ35 241 aa9.43□□□□□ -0.9
MSRB3-201ENST00000308259 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.43□□□□□ -0.9
MSRB3-201ENST00000308259 CLEC5AQ9NY25 188 aa9.43□□□□□ -0.9
MSRB3-201ENST00000308259 MYOTQ9UBF9 498 aa9.43□□□□□ -0.9
MSRB3-201ENST00000308259 C2CD4DB7Z1M9 353 aa9.43□□□□□ -0.9
MSRB3-201ENST00000308259 TBX19O60806 448 aa9.43□□□□□ -0.9
MSRB3-201ENST00000308259 IGHV2-5P01817 119 aa9.43□□□□□ -0.9
MSRB3-201ENST00000308259 SOD3P08294 240 aa9.43□□□□□ -0.9
MSRB3-201ENST00000308259 LINC00614P0C842 121 aa9.43□□□□□ -0.9
MSRB3-201ENST00000308259 HIST1H1TP22492 207 aaPredicted RBP9.43□□□□□ -0.9
MSRB3-201ENST00000308259 THBS4P35443 961 aa9.43□□□□□ -0.9
MSRB3-201ENST00000308259 DHRS2Q13268 280 aa9.43□□□□□ -0.9
MSRB3-201ENST00000308259 HAGHQ16775 308 aa9.43□□□□□ -0.9
MSRB3-201ENST00000308259 PGGHGQ32M88 737 aa9.43□□□□□ -0.9
MSRB3-201ENST00000308259 SLC35D3Q5M8T2 416 aa9.43□□□□□ -0.9
MSRB3-201ENST00000308259 NECAP1Q8NC96 275 aa9.43□□□□□ -0.9
MSRB3-201ENST00000308259 MS4A6EQ96DS6 147 aa9.43□□□□□ -0.9
MSRB3-201ENST00000308259 FAM210BQ96KR6 192 aa9.43□□□□□ -0.9
MSRB3-201ENST00000308259 C20orf141Q9NUB4 165 aa9.43□□□□□ -0.9
MSRB3-201ENST00000308259 FBXO34Q9NWN3 711 aa9.43□□□□□ -0.9
MSRB3-201ENST00000308259 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.43□□□□□ -0.9
MSRB3-201ENST00000308259 ANKRD20A5PA0PJZ0 165 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms