RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 FAHP16930 419 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 S100A11P31949 105 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 RPS27AP62979 156 aaKnown RBP10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 UBA52P62987 128 aaKnown RBP10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 PLXDC2Q6UX71 529 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 BATF2Q8N1L9 274 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 LILRB2Q8N423 598 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 MCHR2Q969V1 340 aa10.23□□□□□ -0.77
PCDHGC3-201ENST00000308177 SMCO3A2RU48 225 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 GIPP09681 153 aaPredicted RBP10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 GNB3P16520 340 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 ARR3P36575 388 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 SPEM2Q0P670 501 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 TAF9Q16594 264 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 LPCAT3Q6P1A2 487 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 RHOUQ7L0Q8 258 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 OR4C16Q8NGL9 310 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 SARAFQ96BY9 339 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 NECAP2Q9NVZ3 263 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 B3GNT2Q9NY97 397 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 NTMQ9P121 344 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 SVILO95425 2214 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 H7C2Y5 167 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 EPPINO95925 133 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 IFI6P09912 130 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 PNLIPP16233 465 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 IDH3GP51553 393 aaPredicted RBP10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 RBPJQ06330 500 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 AKR1C8PQ5T2L2 129 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 TEX19Q8NA77 164 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 PBDC1Q9BVG4 233 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 RGCCQ9H4X1 137 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 OR5V1Q9UGF6 321 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 A0A1W2PR77 199 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 K7EPK0 472 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 PTHLHP12272 177 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 ECI1P42126 302 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 GABRA2P47869 451 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 CEBPEQ15744 281 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 FBXW12Q6X9E4 464 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 FAM71E2Q8N5Q1 922 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 PCNPQ8WW12 178 aaKnown RBP10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 CTHRC1Q96CG8 243 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 BARHL1Q9BZE3 327 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 EP300Q09472 2414 aaPredicted RBP10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 A0A1B0GUH1 482 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 LIPT2A6NK58 231 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 SRD5A2P31213 254 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 GZMKP49863 264 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 CRYBA2P53672 197 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 ZMYND11Q15326 602 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 IAH1Q2TAA2 248 aaPredicted RBP10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 ARTNQ5T4W7 220 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 LAIR2Q6ISS4 152 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 OR10R2Q8NGX6 335 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 PP6455Q8WZ26 134 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 RNF32Q9H0A6 362 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 GHRLQ9UBU3 117 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 GPR160Q9UJ42 338 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 KCNE5Q9UJ90 142 aa10.22□□□□□ -0.77
PCDHGC3-201ENST00000308177 OR2M5A3KFT3 312 aa10.21□□□□□ -0.77
PCDHGC3-201ENST00000308177 M0R296 226 aa10.21□□□□□ -0.77
PCDHGC3-201ENST00000308177 GUCA2AQ02747 115 aa10.21□□□□□ -0.77
PCDHGC3-201ENST00000308177 CAMK2BQ13554 666 aa10.21□□□□□ -0.77
PCDHGC3-201ENST00000308177 DNASE2BQ8WZ79 361 aa10.21□□□□□ -0.77
PCDHGC3-201ENST00000308177 ABHD1Q96SE0 405 aa10.21□□□□□ -0.77
PCDHGC3-201ENST00000308177 NKX3-1Q99801 234 aaPredicted RBP10.21□□□□□ -0.77
PCDHGC3-201ENST00000308177 TCFL5Q9UL49 500 aa10.21□□□□□ -0.77
PCDHGC3-201ENST00000308177 GLSO94925 669 aaPredicted RBP10.21□□□□□ -0.77
PCDHGC3-201ENST00000308177 MGMTP16455 207 aa10.21□□□□□ -0.77
PCDHGC3-201ENST00000308177 SSBP1Q04837 148 aaKnown RBP10.21□□□□□ -0.77
PCDHGC3-201ENST00000308177 ZNF169Q14929 603 aaPredicted RBP10.21□□□□□ -0.77
PCDHGC3-201ENST00000308177 LINC00303Q3SY05 128 aa10.21□□□□□ -0.77
PCDHGC3-201ENST00000308177 LHFPL2Q6ZUX7 228 aa10.21□□□□□ -0.77
PCDHGC3-201ENST00000308177 M1APQ8TC57 530 aa10.21□□□□□ -0.77
PCDHGC3-201ENST00000308177 C1QTNF6Q9BXI9 259 aa10.21□□□□□ -0.77
PCDHGC3-201ENST00000308177 SPACA1Q9HBV2 294 aa10.21□□□□□ -0.77
PCDHGC3-201ENST00000308177 CCDC163A0A0D9SF12 145 aa10.21□□□□□ -0.78
PCDHGC3-201ENST00000308177 TEX51A0A1B0GUA7 166 aa10.21□□□□□ -0.78
PCDHGC3-201ENST00000308177 SLC33A1O00400 549 aaPredicted RBP10.21□□□□□ -0.78
PCDHGC3-201ENST00000308177 CCSO14618 274 aa10.21□□□□□ -0.78
PCDHGC3-201ENST00000308177 AGPAT2O15120 278 aa10.21□□□□□ -0.78
PCDHGC3-201ENST00000308177 BGLAPP02818 100 aa10.21□□□□□ -0.78
PCDHGC3-201ENST00000308177 RPL23AP62750 156 aaKnown RBP10.21□□□□□ -0.78
PCDHGC3-201ENST00000308177 FHL5Q5TD97 284 aa10.21□□□□□ -0.78
PCDHGC3-201ENST00000308177 CDC20BQ86Y33 519 aa10.21□□□□□ -0.78
PCDHGC3-201ENST00000308177 OR5AS1Q8N127 324 aa10.21□□□□□ -0.78
PCDHGC3-201ENST00000308177 SLC38A9Q8NBW4 561 aa10.21□□□□□ -0.78
PCDHGC3-201ENST00000308177 OR1F12Q8NHA8 337 aa10.21□□□□□ -0.78
PCDHGC3-201ENST00000308177 B3GAT1Q9P2W7 334 aa10.21□□□□□ -0.78
PCDHGC3-201ENST00000308177 F8W036 122 aa10.21□□□□□ -0.78
PCDHGC3-201ENST00000308177 SDCBPO00560 298 aaPredicted RBP10.21□□□□□ -0.78
PCDHGC3-201ENST00000308177 GSTP1P09211 210 aaKnown RBP10.21□□□□□ -0.78
PCDHGC3-201ENST00000308177 UBE2MP61081 183 aaKnown RBP10.21□□□□□ -0.78
PCDHGC3-201ENST00000308177 ERVK-16P61578 105 aa10.21□□□□□ -0.78
PCDHGC3-201ENST00000308177 BLOC1S1P78537 153 aa10.21□□□□□ -0.78
PCDHGC3-201ENST00000308177 B3GNTL1Q67FW5 361 aaPredicted RBP10.21□□□□□ -0.78
PCDHGC3-201ENST00000308177 SLC51BQ86UW2 128 aa10.21□□□□□ -0.78
PCDHGC3-201ENST00000308177 OR6X1Q8NH79 312 aa10.21□□□□□ -0.78
PCDHGC3-201ENST00000308177 PAQR8Q8TEZ7 354 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms