RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 FAM57BQ71RH2 274 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 ABHD12BQ7Z5M8 362 aaPredicted RBP6.07□□□□□ -1.44
PTCD2-201ENST00000308077 LRRTM1Q86UE6 522 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 TPRA1Q86W33 373 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 CPEB3Q8NE35 698 aaKnown RBP6.07□□□□□ -1.44
PTCD2-201ENST00000308077 OR51E1Q8TCB6 317 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 BCL2L2Q92843 193 aaPredicted RBP6.07□□□□□ -1.44
PTCD2-201ENST00000308077 STARD4Q96DR4 205 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 ZNF799Q96GE5 643 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 LYZL4Q96KX0 146 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 PLGRKTQ9HBL7 147 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 HHLA2Q9UM44 414 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 DHDHQ9UQ10 334 aa6.07□□□□□ -1.44
PTCD2-201ENST00000308077 AK6Q9Y3D8 172 aaKnown RBP6.07□□□□□ -1.44
PTCD2-201ENST00000308077 INTS1Q8N201 2190 aaKnown RBP6.07□□□□□ -1.44
PTCD2-201ENST00000308077 STAB1Q9NY15 2570 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 IGLV3-1P01715 115 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 TMIGD3P0DMS9 266 aaPredicted RBP6.06□□□□□ -1.44
PTCD2-201ENST00000308077 SLC2A2P11168 524 aaPredicted RBP6.06□□□□□ -1.44
PTCD2-201ENST00000308077 PTGER4P35408 488 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 TIMP3P35625 211 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 HTR5AP47898 357 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 SLC6A9P48067 706 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 PER3P56645 1201 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 SF3B4Q15427 424 aaKnown RBP eCLIP6.06□□□□□ -1.44
PTCD2-201ENST00000308077 TSC22D1Q15714 1073 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 TMEM244Q5VVB8 128 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 SFXN4Q6P4A7 337 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 ANKRD16Q6P6B7 361 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 GFRALQ6UXV0 394 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 STAC2Q6ZMT1 411 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 LINC00299Q6ZSB3 139 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 Q6ZT83 130 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 DOLPP1Q86YN1 238 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 LAX1Q8IWV1 398 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 OR13C3Q8NGS6 347 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 WACQ9BTA9 647 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 OPN3Q9H1Y3 402 aaPredicted RBP6.06□□□□□ -1.44
PTCD2-201ENST00000308077 MIXL1Q9H2W2 232 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 ZCCHC4Q9H5U6 513 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 RNF121Q9H920 327 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 PLSCR4Q9NRQ2 329 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 ZNF835Q9Y2P0 537 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 ZGRF1Q86YA3 2104 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 LOC100509620A0A075B734 347 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 RAD51DO75771 328 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 LYZL6O75951 148 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 RAF1P04049 648 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 MAS1P04201 325 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 CD79AP11912 226 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 IGFBP3P17936 291 aaPredicted RBP6.06□□□□□ -1.44
PTCD2-201ENST00000308077 ATF1P18846 271 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 COX5AP20674 150 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 CCL1P22362 96 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 APEX1P27695 318 aaKnown RBP6.06□□□□□ -1.44
PTCD2-201ENST00000308077 CEACAM8P31997 349 aaPredicted RBP6.06□□□□□ -1.44
PTCD2-201ENST00000308077 KLRB1Q12918 225 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 ECH1Q13011 328 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 GFOD2Q3B7J2 385 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 SNAI3Q3KNW1 292 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 TBRG1Q3YBR2 411 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 SLC36A2Q495M3 483 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 IDNKQ5T6J7 187 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 NCCRP1Q6ZVX7 275 aaPredicted RBP6.06□□□□□ -1.44
PTCD2-201ENST00000308077 CCDC190Q86UF4 302 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 ZNF584Q8IVC4 421 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 GABRG1Q8N1C3 465 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 ZNF433Q8N7K0 673 aaPredicted RBP6.06□□□□□ -1.44
PTCD2-201ENST00000308077 ZNF610Q8N9Z0 462 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 OR1J2Q8NGS2 313 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 SPTSSAQ969W0 71 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 PGAM5Q96HS1 289 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 ZNF75AQ96N20 296 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 ABCB9Q9NP78 766 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 GPR84Q9NQS5 396 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 B3GNT2Q9NY97 397 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 TAS2R4Q9NYW5 299 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 TINAGQ9UJW2 476 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 PEX16Q9Y5Y5 336 aa6.06□□□□□ -1.44
PTCD2-201ENST00000308077 ANKHD1Q8IWZ3 2542 aaKnown RBP6.05□□□□□ -1.44
PTCD2-201ENST00000308077 A0A0B4J203 849 aa6.05□□□□□ -1.44
PTCD2-201ENST00000308077 A6NIN4 97 aa6.05□□□□□ -1.44
PTCD2-201ENST00000308077 NOTOA8MTQ0 251 aa6.05□□□□□ -1.44
PTCD2-201ENST00000308077 RGS5O15539 181 aa6.05□□□□□ -1.44
PTCD2-201ENST00000308077 TBX1O43435 398 aa6.05□□□□□ -1.44
PTCD2-201ENST00000308077 SYT7O43581 403 aa6.05□□□□□ -1.44
PTCD2-201ENST00000308077 SLC19A2O60779 497 aa6.05□□□□□ -1.44
PTCD2-201ENST00000308077 CNOT4O95628 575 aaKnown RBP6.05□□□□□ -1.44
PTCD2-201ENST00000308077 IL2RAP01589 272 aa6.05□□□□□ -1.44
PTCD2-201ENST00000308077 CRHP06850 196 aa6.05□□□□□ -1.44
PTCD2-201ENST00000308077 GLI4P10075 376 aa6.05□□□□□ -1.44
PTCD2-201ENST00000308077 EPXP11678 715 aa6.05□□□□□ -1.44
PTCD2-201ENST00000308077 FSTP19883 344 aa6.05□□□□□ -1.44
PTCD2-201ENST00000308077 TNFSF8P32971 234 aa6.05□□□□□ -1.44
PTCD2-201ENST00000308077 TPTEP56180 551 aa6.05□□□□□ -1.44
PTCD2-201ENST00000308077 RAB1AP62820 205 aa6.05□□□□□ -1.44
PTCD2-201ENST00000308077 GABRA6Q16445 453 aa6.05□□□□□ -1.44
PTCD2-201ENST00000308077 DRAM2Q6UX65 266 aa6.05□□□□□ -1.44
PTCD2-201ENST00000308077 DNAAF1Q8NEP3 725 aa6.05□□□□□ -1.44
PTCD2-201ENST00000308077 OR51A2Q8NGJ7 313 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms