RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 SFTPBP07988 381 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 CELA2BP08218 269 aaPredicted RBP4.81□□□□□ -1.64
VPS50-202ENST00000305866 SMIM6P0DI80 62 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 C4BPBP20851 252 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 INPP1P49441 399 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 POLR2HP52434 150 aaKnown RBP4.81□□□□□ -1.64
VPS50-202ENST00000305866 RAB14P61106 215 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 RPL27P61353 136 aaKnown RBP4.81□□□□□ -1.64
VPS50-202ENST00000305866 LCN6P62502 163 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 HHEXQ03014 270 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 ALG10Q5BKT4 473 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 CHRDL2Q6WN34 429 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 PGAP1Q75T13 922 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 COX15Q7KZN9 410 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 NDUFAF7Q7L592 441 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 TAF8Q7Z7C8 310 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 TMPRSS12Q86WS5 348 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 CCDC54Q8NEL0 328 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 OR1N1Q8NGS0 311 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 MFSD8Q8NHS3 518 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 ASB10Q8WXI3 467 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 CMBLQ96DG6 245 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 SAT2Q96F10 170 aaPredicted RBP4.81□□□□□ -1.64
VPS50-202ENST00000305866 CCDC3Q9BQI4 270 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 SOX7Q9BT81 388 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 TCEAL2Q9H3H9 227 aaPredicted RBP4.81□□□□□ -1.64
VPS50-202ENST00000305866 UBE2ZQ9H832 354 aaPredicted RBP4.81□□□□□ -1.64
VPS50-202ENST00000305866 SH2D2AQ9NP31 389 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 SLC22A11Q9NSA0 550 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 MED11Q9P086 117 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 B3GAT1Q9P2W7 334 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 FAM96BQ9Y3D0 163 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 IGHV1OR15-9A0A0B4J2B8 117 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 IGKV1-9A0A0C4DH69 117 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 MEGF11A6BM72 1044 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 PRSS44E7EML9 344 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 EFNA2O43921 213 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 SCGNO76038 276 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 MPZL1O95297 269 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 TTRP02766 147 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 GLAP06280 429 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 SELLP14151 372 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 CD27P26842 260 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 FKBP2P26885 142 aaKnown RBP4.81□□□□□ -1.64
VPS50-202ENST00000305866 PTGDSP41222 190 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 PGDP52209 483 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 AKR1C2P52895 323 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 MAZP56270 477 aaKnown RBP4.81□□□□□ -1.64
VPS50-202ENST00000305866 AKR1C1Q04828 323 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 ACER2Q5QJU3 275 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 OR52W1Q6IF63 320 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 DPY19L4Q7Z388 723 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 MEIOBQ8N635 442 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 OR13G1Q8NGZ3 307 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 OR51F2Q8NH61 342 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 ZNF563Q8TA94 476 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 ZCCHC10Q8TBK6 192 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 PHOSPHO1Q8TCT1 267 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 RNF133Q8WVZ7 376 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 ADAT3Q96EY9 351 aaPredicted RBP4.81□□□□□ -1.64
VPS50-202ENST00000305866 NICN1Q9BSH3 213 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 MYEF2Q9P2K5 600 aaKnown RBP4.81□□□□□ -1.64
VPS50-202ENST00000305866 SLCO1B1Q9Y6L6 691 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 R4GMQ9 66 aa4.81□□□□□ -1.64
VPS50-202ENST00000305866 PRRC2BQ5JSZ5 2229 aaKnown RBP4.8□□□□□ -1.64
VPS50-202ENST00000305866 TRAV18A0A075B6X5 111 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 A0A1B0GVT2 93 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 A6NIZ1 184 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 METTL12A8MUP2 240 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 LMO7DNF2Z398 122 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 MBTPS2O43462 519 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 FBXO24O75426 580 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 HLA-DOBP13765 273 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 ZNF28P17035 718 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 HOXA6P31267 233 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 RAP1BP61224 184 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 RAP1AP62834 184 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 BTG2P78543 158 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 HTRA3P83110 453 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 OR7A5Q15622 319 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 ZNF600Q6ZNG1 722 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 MAMDC2Q7Z304 686 aaPredicted RBP4.8□□□□□ -1.64
VPS50-202ENST00000305866 GRINAQ7Z429 371 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 C5orf24Q7Z6I8 188 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 ADGRE4PQ86SQ3 457 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 FJX1Q86VR8 437 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 SLC39A7Q92504 469 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 CLCC1Q96S66 551 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 INTS14Q96SY0 518 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 FOXQ1Q9C009 403 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 WWTR1Q9GZV5 400 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 OR51M1Q9H341 326 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 SRPK3Q9UPE1 567 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.8□□□□□ -1.64
VPS50-202ENST00000305866 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.8□□□□□ -1.64
VPS50-202ENST00000305866 TVP23AA6NH52 213 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 A8MVM7 634 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 SLC31A1O15431 190 aa4.8□□□□□ -1.64
VPS50-202ENST00000305866 ZNF354AO60765 605 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms