RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 ACOD1A6NK06 481 aa20.99■□□□□ 0.95
HOXC9-201ENST00000303450 J3QLW9 94 aa20.99■□□□□ 0.95
HOXC9-201ENST00000303450 XRCC2O43543 280 aa20.99■□□□□ 0.95
HOXC9-201ENST00000303450 ZNF19P17023 458 aa20.99■□□□□ 0.95
HOXC9-201ENST00000303450 CD53P19397 219 aa20.99■□□□□ 0.95
HOXC9-201ENST00000303450 ANOS1P23352 680 aa20.99■□□□□ 0.95
HOXC9-201ENST00000303450 DNASE1P24855 282 aa20.99■□□□□ 0.95
HOXC9-201ENST00000303450 GK2Q14410 553 aaPredicted RBP20.99■□□□□ 0.95
HOXC9-201ENST00000303450 TIGD6Q17RP2 521 aa20.99■□□□□ 0.95
HOXC9-201ENST00000303450 GLYATL3Q5SZD4 288 aa20.99■□□□□ 0.95
HOXC9-201ENST00000303450 FBXW12Q6X9E4 464 aa20.99■□□□□ 0.95
HOXC9-201ENST00000303450 OR2AE1Q8NHA4 323 aa20.99■□□□□ 0.95
HOXC9-201ENST00000303450 C4orf36Q96KX1 117 aa20.99■□□□□ 0.95
HOXC9-201ENST00000303450 ZNF649Q9BS31 505 aa20.99■□□□□ 0.95
HOXC9-201ENST00000303450 ACOXLQ9NUZ1 547 aa20.99■□□□□ 0.95
HOXC9-201ENST00000303450 FKBP14Q9NWM8 211 aa20.99■□□□□ 0.95
HOXC9-201ENST00000303450 UBAP1Q9NZ09 502 aa20.99■□□□□ 0.95
HOXC9-201ENST00000303450 MYEF2Q9P2K5 600 aaKnown RBP20.99■□□□□ 0.95
HOXC9-201ENST00000303450 LOC110117498-PIK3R3F6TDL0 507 aa20.98■□□□□ 0.95
HOXC9-201ENST00000303450 IGHV3-13P01766 116 aa20.98■□□□□ 0.95
HOXC9-201ENST00000303450 ADRA2AP08913 450 aa20.98■□□□□ 0.95
HOXC9-201ENST00000303450 LIMS3P0CW19 117 aa20.98■□□□□ 0.95
HOXC9-201ENST00000303450 LIMS4P0CW20 117 aa20.98■□□□□ 0.95
HOXC9-201ENST00000303450 RAC2P15153 192 aa20.98■□□□□ 0.95
HOXC9-201ENST00000303450 ETV1P50549 477 aa20.98■□□□□ 0.95
HOXC9-201ENST00000303450 MVKQ03426 396 aa20.98■□□□□ 0.95
HOXC9-201ENST00000303450 MFGE8Q08431 387 aaPredicted RBP20.98■□□□□ 0.95
HOXC9-201ENST00000303450 PSG7Q13046 419 aa20.98■□□□□ 0.95
HOXC9-201ENST00000303450 MOGQ16653 247 aa20.98■□□□□ 0.95
HOXC9-201ENST00000303450 C11orf71Q6IPW1 123 aa20.98■□□□□ 0.95
HOXC9-201ENST00000303450 PGAP1Q75T13 922 aa20.98■□□□□ 0.95
HOXC9-201ENST00000303450 MRPL21Q7Z2W9 205 aaKnown RBP20.98■□□□□ 0.95
HOXC9-201ENST00000303450 MYDGFQ969H8 173 aa20.98■□□□□ 0.95
HOXC9-201ENST00000303450 PBOV1Q9GZY1 135 aa20.98■□□□□ 0.95
HOXC9-201ENST00000303450 CXorf56Q9H5V9 222 aa20.98■□□□□ 0.95
HOXC9-201ENST00000303450 TAAR3PQ9P1P4 343 aa20.98■□□□□ 0.95
HOXC9-201ENST00000303450 GPR160Q9UJ42 338 aa20.98■□□□□ 0.95
HOXC9-201ENST00000303450 SNX5Q9Y5X3 404 aa20.98■□□□□ 0.95
HOXC9-201ENST00000303450 PMF1-BGLAPU3KQ54 211 aa20.98■□□□□ 0.95
HOXC9-201ENST00000303450 ANKRD17O75179 2603 aaKnown RBP20.97■□□□□ 0.95
HOXC9-201ENST00000303450 SETXQ7Z333 2677 aaKnown RBP20.97■□□□□ 0.95
HOXC9-201ENST00000303450 PNPP00491 289 aa20.97■□□□□ 0.95
HOXC9-201ENST00000303450 ZNF92Q03936 586 aa20.97■□□□□ 0.95
HOXC9-201ENST00000303450 NKPD1Q17RQ9 610 aa20.97■□□□□ 0.95
HOXC9-201ENST00000303450 GFOD2Q3B7J2 385 aa20.97■□□□□ 0.95
HOXC9-201ENST00000303450 RBM48Q5RL73 367 aaKnown RBP20.97■□□□□ 0.95
HOXC9-201ENST00000303450 EGFL6Q8IUX8 553 aa20.97■□□□□ 0.95
HOXC9-201ENST00000303450 SYS1Q8N2H4 156 aa20.97■□□□□ 0.95
HOXC9-201ENST00000303450 OR8B12Q8NGG6 310 aa20.97■□□□□ 0.95
HOXC9-201ENST00000303450 HAVCR1Q96D42 359 aa20.97■□□□□ 0.95
HOXC9-201ENST00000303450 SIGLEC11Q96RL6 698 aa20.97■□□□□ 0.95
HOXC9-201ENST00000303450 MOB1AQ9H8S9 216 aa20.97■□□□□ 0.95
HOXC9-201ENST00000303450 DYNLRB1Q9NP97 96 aa20.97■□□□□ 0.95
HOXC9-201ENST00000303450 ZNF319Q9P2F9 582 aa20.97■□□□□ 0.95
HOXC9-201ENST00000303450 FBXO9Q9UK97 447 aaPredicted RBP20.97■□□□□ 0.95
HOXC9-201ENST00000303450 ARFGEF3Q5TH69 2177 aa20.96■□□□□ 0.95
HOXC9-201ENST00000303450 TIMM8AO60220 97 aaPredicted RBP20.96■□□□□ 0.95
HOXC9-201ENST00000303450 SRSF10O75494 262 aaKnown RBP20.96■□□□□ 0.95
HOXC9-201ENST00000303450 C21orf33P30042 268 aaPredicted RBP20.96■□□□□ 0.95
HOXC9-201ENST00000303450 BCL2L15Q5TBC7 163 aa20.96■□□□□ 0.95
HOXC9-201ENST00000303450 TMPRSS11AQ6ZMR5 421 aa20.96■□□□□ 0.95
HOXC9-201ENST00000303450 CDH24Q86UP0 819 aa20.96■□□□□ 0.95
HOXC9-201ENST00000303450 IGFBPL1Q8WX77 278 aa20.96■□□□□ 0.95
HOXC9-201ENST00000303450 RORBQ92753 470 aa20.96■□□□□ 0.95
HOXC9-201ENST00000303450 SGK3Q96BR1 496 aa20.96■□□□□ 0.95
HOXC9-201ENST00000303450 REEP6Q96HR9 211 aa20.96■□□□□ 0.95
HOXC9-201ENST00000303450 CACNG6Q9BXT2 260 aa20.96■□□□□ 0.95
HOXC9-201ENST00000303450 RGCCQ9H4X1 137 aa20.96■□□□□ 0.95
HOXC9-201ENST00000303450 ISG20L2Q9H9L3 353 aaKnown RBP20.96■□□□□ 0.95
HOXC9-201ENST00000303450 NUFIP1Q9UHK0 495 aaKnown RBP20.96■□□□□ 0.95
HOXC9-201ENST00000303450 PURGQ9UJV8 347 aaKnown RBP20.96■□□□□ 0.95
HOXC9-201ENST00000303450 OR52A1Q9UKL2 312 aa20.96■□□□□ 0.95
HOXC9-201ENST00000303450 BLOC1S6Q9UL45 172 aa20.96■□□□□ 0.95
HOXC9-201ENST00000303450 NOTCH2Q04721 2471 aa20.96■□□□□ 0.95
HOXC9-201ENST00000303450 M0R233 179 aa20.95■□□□□ 0.94
HOXC9-201ENST00000303450 CDK1P06493 297 aa20.95■□□□□ 0.94
HOXC9-201ENST00000303450 KITLGP21583 273 aa20.95■□□□□ 0.94
HOXC9-201ENST00000303450 CRHBPP24387 322 aa20.95■□□□□ 0.94
HOXC9-201ENST00000303450 PSMB10P40306 273 aa20.95■□□□□ 0.94
HOXC9-201ENST00000303450 ALDH3B1P43353 468 aa20.95■□□□□ 0.94
HOXC9-201ENST00000303450 ALKBH6Q3KRA9 238 aa20.95■□□□□ 0.94
HOXC9-201ENST00000303450 OR2T2Q6IF00 324 aa20.95■□□□□ 0.94
HOXC9-201ENST00000303450 KLHL36Q8N4N3 616 aa20.95■□□□□ 0.94
HOXC9-201ENST00000303450 NINJ1Q92982 152 aa20.95■□□□□ 0.94
HOXC9-201ENST00000303450 REPIN1Q9BWE0 567 aaKnown RBP20.95■□□□□ 0.94
HOXC9-201ENST00000303450 OPA3Q9H6K4 179 aa20.95■□□□□ 0.94
HOXC9-201ENST00000303450 G6PC2Q9NQR9 355 aa20.95■□□□□ 0.94
HOXC9-201ENST00000303450 CLEC2DQ9UHP7 191 aa20.95■□□□□ 0.94
HOXC9-201ENST00000303450 CAB39Q9Y376 341 aaPredicted RBP20.95■□□□□ 0.94
HOXC9-201ENST00000303450 NAV2Q8IVL1 2488 aa20.95■□□□□ 0.94
HOXC9-201ENST00000303450 MT-ND5P03915 603 aa20.94■□□□□ 0.94
HOXC9-201ENST00000303450 SELEP16581 610 aa20.94■□□□□ 0.94
HOXC9-201ENST00000303450 CFL1P23528 166 aaKnown RBP20.94■□□□□ 0.94
HOXC9-201ENST00000303450 CDKN1AP38936 164 aa20.94■□□□□ 0.94
HOXC9-201ENST00000303450 SLC35A2P78381 396 aa20.94■□□□□ 0.94
HOXC9-201ENST00000303450 TMEM255AQ5JRV8 349 aa20.94■□□□□ 0.94
HOXC9-201ENST00000303450 SPSB4Q96A44 273 aa20.94■□□□□ 0.94
HOXC9-201ENST00000303450 PELI1Q96FA3 418 aa20.94■□□□□ 0.94
HOXC9-201ENST00000303450 PAK1IP1Q9NWT1 392 aaPredicted RBP20.94■□□□□ 0.94
HOXC9-201ENST00000303450 USF3Q68DE3 2245 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms