RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 TMEM138Q9NPI0 162 aa19.5■□□□□ 0.71
SMAD1-201ENST00000302085 A0A0U1RQV5 110 aa19.5■□□□□ 0.71
SMAD1-201ENST00000302085 TMEM272A0A1B0GTI8 110 aa19.5■□□□□ 0.71
SMAD1-201ENST00000302085 OR6C65A6NJZ3 312 aa19.5■□□□□ 0.71
SMAD1-201ENST00000302085 SPINK2P20155 84 aa19.5■□□□□ 0.71
SMAD1-201ENST00000302085 SRP9P49458 86 aaKnown RBP19.5■□□□□ 0.71
SMAD1-201ENST00000302085 PCBD1P61457 104 aa19.5■□□□□ 0.71
SMAD1-201ENST00000302085 GPR176Q14439 515 aa19.5■□□□□ 0.71
SMAD1-201ENST00000302085 STK11Q15831 433 aa19.5■□□□□ 0.71
SMAD1-201ENST00000302085 NRN1LQ496H8 165 aa19.5■□□□□ 0.71
SMAD1-201ENST00000302085 HACD4Q5VWC8 232 aa19.5■□□□□ 0.71
SMAD1-201ENST00000302085 OR13C9Q8NGT0 318 aa19.5■□□□□ 0.71
SMAD1-201ENST00000302085 SMIM4Q8WVI0 70 aa19.5■□□□□ 0.71
SMAD1-201ENST00000302085 FREM1Q5H8C1 2179 aa19.49■□□□□ 0.71
SMAD1-201ENST00000302085 MMP7P09237 267 aaPredicted RBP19.49■□□□□ 0.71
SMAD1-201ENST00000302085 RAB3AP20336 220 aa19.49■□□□□ 0.71
SMAD1-201ENST00000302085 NHLH1Q02575 133 aa19.49■□□□□ 0.71
SMAD1-201ENST00000302085 TMEM69Q5SWH9 247 aa19.49■□□□□ 0.71
SMAD1-201ENST00000302085 SFRP5Q5T4F7 317 aa19.49■□□□□ 0.71
SMAD1-201ENST00000302085 C9orf135Q5VTT2 229 aa19.49■□□□□ 0.71
SMAD1-201ENST00000302085 ANKRD16Q6P6B7 361 aa19.49■□□□□ 0.71
SMAD1-201ENST00000302085 GLCCI1Q86VQ1 547 aa19.49■□□□□ 0.71
SMAD1-201ENST00000302085 FOXRED1Q96CU9 486 aaPredicted RBP19.49■□□□□ 0.71
SMAD1-201ENST00000302085 ZC3HAV1LQ96H79 300 aaKnown RBP19.49■□□□□ 0.71
SMAD1-201ENST00000302085 SLC22A20A6NK97 555 aa19.48■□□□□ 0.71
SMAD1-201ENST00000302085 ZNF587BE7ETH6 402 aa19.48■□□□□ 0.71
SMAD1-201ENST00000302085 SULT1B1O43704 296 aa19.48■□□□□ 0.71
SMAD1-201ENST00000302085 CTAG2O75638 210 aa19.48■□□□□ 0.71
SMAD1-201ENST00000302085 MNDAP41218 407 aa19.48■□□□□ 0.71
SMAD1-201ENST00000302085 TAS2R20P59543 309 aa19.48■□□□□ 0.71
SMAD1-201ENST00000302085 HGFACQ04756 655 aa19.48■□□□□ 0.71
SMAD1-201ENST00000302085 CARTPTQ16568 116 aa19.48■□□□□ 0.71
SMAD1-201ENST00000302085 DRAM2Q6UX65 266 aa19.48■□□□□ 0.71
SMAD1-201ENST00000302085 ZADH2Q8N4Q0 377 aa19.48■□□□□ 0.71
SMAD1-201ENST00000302085 OR4D6Q8NGJ1 314 aa19.48■□□□□ 0.71
SMAD1-201ENST00000302085 GCDHQ92947 438 aaPredicted RBP19.48■□□□□ 0.71
SMAD1-201ENST00000302085 AUNIPQ9H7T9 357 aa19.48■□□□□ 0.71
SMAD1-201ENST00000302085 XRCC3O43542 346 aa19.48■□□□□ 0.71
SMAD1-201ENST00000302085 FARS2O95363 451 aaKnown RBP19.48■□□□□ 0.71
SMAD1-201ENST00000302085 ARSBP15848 533 aa19.48■□□□□ 0.71
SMAD1-201ENST00000302085 TPTEP56180 551 aa19.48■□□□□ 0.71
SMAD1-201ENST00000302085 FOXC1Q12948 553 aa19.48■□□□□ 0.71
SMAD1-201ENST00000302085 SNAI3Q3KNW1 292 aa19.48■□□□□ 0.71
SMAD1-201ENST00000302085 ZNF100Q8IYN0 542 aa19.48■□□□□ 0.71
SMAD1-201ENST00000302085 OR5AS1Q8N127 324 aa19.48■□□□□ 0.71
SMAD1-201ENST00000302085 DUSP18Q8NEJ0 188 aa19.48■□□□□ 0.71
SMAD1-201ENST00000302085 ENKURQ8TC29 256 aa19.48■□□□□ 0.71
SMAD1-201ENST00000302085 SGK3Q96BR1 496 aa19.48■□□□□ 0.71
SMAD1-201ENST00000302085 PRDM14Q9GZV8 571 aa19.48■□□□□ 0.71
SMAD1-201ENST00000302085 CNTD2Q9H8S5 307 aa19.48■□□□□ 0.71
SMAD1-201ENST00000302085 ZNF175Q9Y473 711 aa19.48■□□□□ 0.71
SMAD1-201ENST00000302085 LDLRAD4O15165 306 aa19.47■□□□□ 0.71
SMAD1-201ENST00000302085 ZNHIT1O43257 154 aa19.47■□□□□ 0.71
SMAD1-201ENST00000302085 HNRNPCP07910 306 aaKnown RBP eCLIP19.47■□□□□ 0.71
SMAD1-201ENST00000302085 PTHLHP12272 177 aa19.47■□□□□ 0.71
SMAD1-201ENST00000302085 IGFL3Q6UXB1 125 aa19.47■□□□□ 0.71
SMAD1-201ENST00000302085 Q6ZSR3 168 aa19.47■□□□□ 0.71
SMAD1-201ENST00000302085 SORCS2Q96PQ0 1159 aa19.47■□□□□ 0.71
SMAD1-201ENST00000302085 ZNF224Q9NZL3 707 aa19.47■□□□□ 0.71
SMAD1-201ENST00000302085 UPB1Q9UBR1 384 aa19.47■□□□□ 0.71
SMAD1-201ENST00000302085 V9GYS6 101 aa19.47■□□□□ 0.71
SMAD1-201ENST00000302085 TNRC6AQ8NDV7 1962 aaKnown RBP19.47■□□□□ 0.71
SMAD1-201ENST00000302085 ORC5O43913 435 aa19.46■□□□□ 0.71
SMAD1-201ENST00000302085 HTR5AP47898 357 aa19.46■□□□□ 0.71
SMAD1-201ENST00000302085 CD300CQ08708 224 aa19.46■□□□□ 0.71
SMAD1-201ENST00000302085 PGAP1Q75T13 922 aa19.46■□□□□ 0.71
SMAD1-201ENST00000302085 ZNF627Q7L945 461 aa19.46■□□□□ 0.71
SMAD1-201ENST00000302085 KRT74Q7RTS7 529 aa19.46■□□□□ 0.71
SMAD1-201ENST00000302085 RNF144BQ7Z419 303 aa19.46■□□□□ 0.71
SMAD1-201ENST00000302085 SIAH3Q8IW03 269 aa19.46■□□□□ 0.71
SMAD1-201ENST00000302085 OR52I2Q8NH67 350 aa19.46■□□□□ 0.71
SMAD1-201ENST00000302085 PLEKHA1Q9HB21 404 aa19.46■□□□□ 0.71
SMAD1-201ENST00000302085 CACNG2Q9Y698 323 aa19.46■□□□□ 0.71
SMAD1-201ENST00000302085 URB1O60287 2271 aaKnown RBP19.46■□□□□ 0.71
SMAD1-201ENST00000302085 A0A096LPE4 126 aa19.46■□□□□ 0.71
SMAD1-201ENST00000302085 FAM240BA0A1B0GVZ2 78 aa19.46■□□□□ 0.71
SMAD1-201ENST00000302085 A0A1W2PPZ6 126 aa19.46■□□□□ 0.71
SMAD1-201ENST00000302085 CIB4A0PJX0 185 aa19.46■□□□□ 0.71
SMAD1-201ENST00000302085 TPPPO94811 219 aa19.46■□□□□ 0.71
SMAD1-201ENST00000302085 AGTR1P30556 359 aa19.46■□□□□ 0.71
SMAD1-201ENST00000302085 FAPQ12884 760 aa19.46■□□□□ 0.71
SMAD1-201ENST00000302085 ADGRE4PQ86SQ3 457 aa19.46■□□□□ 0.71
SMAD1-201ENST00000302085 TOMM5Q8N4H5 51 aa19.46■□□□□ 0.71
SMAD1-201ENST00000302085 OR52H1Q8NGJ2 320 aa19.46■□□□□ 0.71
SMAD1-201ENST00000302085 OR10A2Q9H208 303 aa19.46■□□□□ 0.71
SMAD1-201ENST00000302085 METTL17Q9H7H0 456 aaPredicted RBP19.46■□□□□ 0.71
SMAD1-201ENST00000302085 NLKQ9UBE8 527 aa19.46■□□□□ 0.71
SMAD1-201ENST00000302085 PRSS50Q9UI38 385 aa19.46■□□□□ 0.71
SMAD1-201ENST00000302085 GABARAPH6UMI1 98 aa19.45■□□□□ 0.7
SMAD1-201ENST00000302085 KDM4BO94953 1096 aa19.45■□□□□ 0.7
SMAD1-201ENST00000302085 PABPC1L2AQ5JQF8 200 aa19.45■□□□□ 0.7
SMAD1-201ENST00000302085 CPEB3Q8NE35 698 aaKnown RBP19.45■□□□□ 0.7
SMAD1-201ENST00000302085 TAAR6Q96RI8 345 aa19.45■□□□□ 0.7
SMAD1-201ENST00000302085 MYEF2Q9P2K5 600 aaKnown RBP19.45■□□□□ 0.7
SMAD1-201ENST00000302085 GGT3PA6NGU5 568 aa19.44■□□□□ 0.7
SMAD1-201ENST00000302085 BOLA2-SMG1P6H3BVE0 249 aa19.44■□□□□ 0.7
SMAD1-201ENST00000302085 AQP7O14520 342 aa19.44■□□□□ 0.7
SMAD1-201ENST00000302085 DHRS3O75911 302 aa19.44■□□□□ 0.7
SMAD1-201ENST00000302085 GDNFP39905 211 aa19.44■□□□□ 0.7
SMAD1-201ENST00000302085 KLF9Q13886 244 aaPredicted RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms