RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 ACOT7O00154 380 aa19.45■□□□□ 0.7
TPM4-201ENST00000300933 TRAF3IP2O43734 574 aaPredicted RBP19.45■□□□□ 0.7
TPM4-201ENST00000300933 TCN2P20062 427 aa19.45■□□□□ 0.7
TPM4-201ENST00000300933 MPLP40238 635 aa19.45■□□□□ 0.7
TPM4-201ENST00000300933 FOLR3P41439 243 aa19.45■□□□□ 0.7
TPM4-201ENST00000300933 TIPARPQ7Z3E1 657 aaKnown RBP19.45■□□□□ 0.7
TPM4-201ENST00000300933 OR1J4Q8NGS1 313 aa19.45■□□□□ 0.7
TPM4-201ENST00000300933 SLAMF6Q96DU3 332 aa19.45■□□□□ 0.7
TPM4-201ENST00000300933 UCN2Q96RP3 112 aa19.45■□□□□ 0.7
TPM4-201ENST00000300933 EP300Q09472 2414 aaPredicted RBP19.44■□□□□ 0.7
TPM4-201ENST00000300933 SRSF10O75494 262 aaKnown RBP19.44■□□□□ 0.7
TPM4-201ENST00000300933 ZNF43P17038 809 aa19.44■□□□□ 0.7
TPM4-201ENST00000300933 CSRP1P21291 193 aaKnown RBP19.44■□□□□ 0.7
TPM4-201ENST00000300933 DNASE1L1P49184 302 aa19.44■□□□□ 0.7
TPM4-201ENST00000300933 GMFBP60983 142 aa19.44■□□□□ 0.7
TPM4-201ENST00000300933 B2MP61769 119 aa19.44■□□□□ 0.7
TPM4-201ENST00000300933 SLC36A1Q7Z2H8 476 aa19.44■□□□□ 0.7
TPM4-201ENST00000300933 FADS6Q8N9I5 356 aa19.44■□□□□ 0.7
TPM4-201ENST00000300933 BPIFCQ8NFQ6 507 aa19.44■□□□□ 0.7
TPM4-201ENST00000300933 OR4C16Q8NGL9 310 aa19.44■□□□□ 0.7
TPM4-201ENST00000300933 OR6S1Q8NH40 331 aa19.44■□□□□ 0.7
TPM4-201ENST00000300933 SOX7Q9BT81 388 aa19.44■□□□□ 0.7
TPM4-201ENST00000300933 NKX6-2Q9C056 277 aaPredicted RBP19.44■□□□□ 0.7
TPM4-201ENST00000300933 PISDQ9UG56 409 aa19.44■□□□□ 0.7
TPM4-201ENST00000300933 FAM186AA6NE01 2351 aa19.44■□□□□ 0.7
TPM4-201ENST00000300933 CACNA1HO95180 2353 aa19.44■□□□□ 0.7
TPM4-201ENST00000300933 SSR4P51571 173 aa19.44■□□□□ 0.7
TPM4-201ENST00000300933 GPR85P60893 370 aa19.44■□□□□ 0.7
TPM4-201ENST00000300933 TMEM88Q6PEY1 159 aa19.44■□□□□ 0.7
TPM4-201ENST00000300933 JAGN1Q8N5M9 183 aa19.44■□□□□ 0.7
TPM4-201ENST00000300933 EIF4E3Q8N5X7 224 aaKnown RBP19.44■□□□□ 0.7
TPM4-201ENST00000300933 DTWD2Q8NBA8 298 aa19.44■□□□□ 0.7
TPM4-201ENST00000300933 SLC25A28Q96A46 364 aa19.44■□□□□ 0.7
TPM4-201ENST00000300933 FAM3DQ96BQ1 224 aa19.44■□□□□ 0.7
TPM4-201ENST00000300933 CHST6Q9GZX3 395 aa19.44■□□□□ 0.7
TPM4-201ENST00000300933 MRPS18BQ9Y676 258 aaKnown RBP19.44■□□□□ 0.7
TPM4-201ENST00000300933 PGA4P0DJD7 388 aa19.43■□□□□ 0.7
TPM4-201ENST00000300933 PGA3P0DJD8 388 aa19.43■□□□□ 0.7
TPM4-201ENST00000300933 FLI1Q01543 452 aaPredicted RBP19.43■□□□□ 0.7
TPM4-201ENST00000300933 C4orf46Q504U0 113 aa19.43■□□□□ 0.7
TPM4-201ENST00000300933 CMTM3Q96MX0 182 aa19.43■□□□□ 0.7
TPM4-201ENST00000300933 ASH2LQ9UBL3 628 aa19.43■□□□□ 0.7
TPM4-201ENST00000300933 TRAV18A0A075B6X5 111 aa19.43■□□□□ 0.7
TPM4-201ENST00000300933 TMEM272A0A1B0GTI8 110 aa19.43■□□□□ 0.7
TPM4-201ENST00000300933 RER1O15258 196 aa19.43■□□□□ 0.7
TPM4-201ENST00000300933 CLDN17P56750 224 aa19.43■□□□□ 0.7
TPM4-201ENST00000300933 Q0VFX4 171 aa19.43■□□□□ 0.7
TPM4-201ENST00000300933 TRA2AQ13595 282 aaKnown RBP eCLIP19.43■□□□□ 0.7
TPM4-201ENST00000300933 OPN5Q6U736 354 aa19.43■□□□□ 0.7
TPM4-201ENST00000300933 OR8S1Q8NH09 359 aa19.43■□□□□ 0.7
TPM4-201ENST00000300933 LOXL2Q9Y4K0 774 aa19.43■□□□□ 0.7
TPM4-201ENST00000300933 LNP1A1A4G5 178 aa19.42■□□□□ 0.7
TPM4-201ENST00000300933 QDPRP09417 244 aa19.42■□□□□ 0.7
TPM4-201ENST00000300933 LAP3P28838 519 aa19.42■□□□□ 0.7
TPM4-201ENST00000300933 MPGP29372 298 aa19.42■□□□□ 0.7
TPM4-201ENST00000300933 RBMS2Q15434 407 aaKnown RBP19.42■□□□□ 0.7
TPM4-201ENST00000300933 RSPO4Q2I0M5 234 aaPredicted RBP19.42■□□□□ 0.7
TPM4-201ENST00000300933 LILRB1Q8NHL6 650 aaPredicted RBP19.42■□□□□ 0.7
TPM4-201ENST00000300933 FGGYQ96C11 551 aa19.42■□□□□ 0.7
TPM4-201ENST00000300933 CYB5R1Q9UHQ9 305 aa19.42■□□□□ 0.7
TPM4-201ENST00000300933 LHFPL6Q9Y693 200 aa19.42■□□□□ 0.7
TPM4-201ENST00000300933 RAB40ALP0C0E4 278 aa19.42■□□□□ 0.7
TPM4-201ENST00000300933 RAB11BQ15907 218 aa19.42■□□□□ 0.7
TPM4-201ENST00000300933 GFOD2Q3B7J2 385 aa19.42■□□□□ 0.7
TPM4-201ENST00000300933 RAB40AQ8WXH6 277 aa19.42■□□□□ 0.7
TPM4-201ENST00000300933 DVL3Q92997 716 aaPredicted RBP19.42■□□□□ 0.7
TPM4-201ENST00000300933 UTP23Q9BRU9 249 aaKnown RBP19.42■□□□□ 0.7
TPM4-201ENST00000300933 ATG5Q9H1Y0 275 aa19.42■□□□□ 0.7
TPM4-201ENST00000300933 ZNF230Q9UIE0 474 aaPredicted RBP19.42■□□□□ 0.7
TPM4-201ENST00000300933 CDV3Q9UKY7 258 aaKnown RBP19.42■□□□□ 0.7
TPM4-201ENST00000300933 HHLA2Q9UM44 414 aa19.42■□□□□ 0.7
TPM4-201ENST00000300933 DOCK10Q96BY6 2186 aa19.42■□□□□ 0.7
TPM4-201ENST00000300933 A0A1W2PNV4 684 aa19.41■□□□□ 0.7
TPM4-201ENST00000300933 SULT1B1O43704 296 aa19.41■□□□□ 0.7
TPM4-201ENST00000300933 ZIC3O60481 467 aa19.41■□□□□ 0.7
TPM4-201ENST00000300933 CTAG2O75638 210 aa19.41■□□□□ 0.7
TPM4-201ENST00000300933 RBBP9O75884 186 aa19.41■□□□□ 0.7
TPM4-201ENST00000300933 IGHG1P01857 330 aa19.41■□□□□ 0.7
TPM4-201ENST00000300933 CD2P06729 351 aa19.41■□□□□ 0.7
TPM4-201ENST00000300933 GNALP38405 381 aa19.41■□□□□ 0.7
TPM4-201ENST00000300933 EXT1Q16394 746 aa19.41■□□□□ 0.7
TPM4-201ENST00000300933 BEX5Q5H9J7 111 aa19.41■□□□□ 0.7
TPM4-201ENST00000300933 OR51S1Q8NGJ8 323 aa19.41■□□□□ 0.7
TPM4-201ENST00000300933 RNF133Q8WVZ7 376 aa19.41■□□□□ 0.7
TPM4-201ENST00000300933 NKD1Q969G9 470 aa19.41■□□□□ 0.7
TPM4-201ENST00000300933 USB1Q9BQ65 265 aaKnown RBP19.41■□□□□ 0.7
TPM4-201ENST00000300933 CFAP47Q6ZTR5 3102 aa19.41■□□□□ 0.7
TPM4-201ENST00000300933 SNAPC5O75971 98 aa19.41■□□□□ 0.7
TPM4-201ENST00000300933 CBX5P45973 191 aa19.41■□□□□ 0.7
TPM4-201ENST00000300933 STARP49675 285 aa19.41■□□□□ 0.7
TPM4-201ENST00000300933 AKR1C2P52895 323 aa19.41■□□□□ 0.7
TPM4-201ENST00000300933 AKR1C1Q04828 323 aa19.41■□□□□ 0.7
TPM4-201ENST00000300933 DCAF12Q5T6F0 453 aa19.41■□□□□ 0.7
TPM4-201ENST00000300933 RNF144BQ7Z419 303 aa19.41■□□□□ 0.7
TPM4-201ENST00000300933 NOXO1Q8NFA2 376 aa19.41■□□□□ 0.7
TPM4-201ENST00000300933 OR6K3Q8NGY3 331 aa19.41■□□□□ 0.7
TPM4-201ENST00000300933 SPACA5Q96QH8 159 aa19.41■□□□□ 0.7
TPM4-201ENST00000300933 C12orf57Q99622 126 aa19.41■□□□□ 0.7
TPM4-201ENST00000300933 GDF2Q9UK05 429 aaPredicted RBP19.41■□□□□ 0.7
TPM4-201ENST00000300933 PADI1Q9ULC6 663 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms