RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 RHBDD3Q9Y3P4 386 aa18.76■□□□□ 0.59
SOX17-201ENST00000297316 TMEM272A0A1B0GTI8 110 aa18.75■□□□□ 0.59
SOX17-201ENST00000297316 SYT7O43581 403 aa18.75■□□□□ 0.59
SOX17-201ENST00000297316 CTAG2O75638 210 aa18.75■□□□□ 0.59
SOX17-201ENST00000297316 CD37P11049 281 aa18.75■□□□□ 0.59
SOX17-201ENST00000297316 LYPD6Q86Y78 171 aa18.75■□□□□ 0.59
SOX17-201ENST00000297316 DOCK7Q96N67 2140 aa18.75■□□□□ 0.59
SOX17-201ENST00000297316 PLEKHA1Q9HB21 404 aa18.75■□□□□ 0.59
SOX17-201ENST00000297316 CEP295Q9C0D2 2601 aa18.75■□□□□ 0.59
SOX17-201ENST00000297316 INMT-MINDY4F8WBC2 141 aa18.75■□□□□ 0.59
SOX17-201ENST00000297316 GABARAPH6UMI1 98 aa18.75■□□□□ 0.59
SOX17-201ENST00000297316 ACOT7O00154 380 aa18.75■□□□□ 0.59
SOX17-201ENST00000297316 GUCA1AP43080 201 aaPredicted RBP18.75■□□□□ 0.59
SOX17-201ENST00000297316 CX3CR1P49238 355 aa18.75■□□□□ 0.59
SOX17-201ENST00000297316 CCR6P51684 374 aa18.75■□□□□ 0.59
SOX17-201ENST00000297316 SCAND1P57086 179 aa18.75■□□□□ 0.59
SOX17-201ENST00000297316 LSM6P62312 80 aaKnown RBP18.75■□□□□ 0.59
SOX17-201ENST00000297316 Q5BKY6 102 aa18.75■□□□□ 0.59
SOX17-201ENST00000297316 TMEM255AQ5JRV8 349 aa18.75■□□□□ 0.59
SOX17-201ENST00000297316 TUSC5Q8IXB3 177 aa18.75■□□□□ 0.59
SOX17-201ENST00000297316 ZDHHC11Q9H8X9 412 aa18.75■□□□□ 0.59
SOX17-201ENST00000297316 LOC100289279A0A1B0GTE1 492 aa18.74■□□□□ 0.59
SOX17-201ENST00000297316 CDK2AP1O14519 115 aa18.74■□□□□ 0.59
SOX17-201ENST00000297316 GFRA3O60609 400 aa18.74■□□□□ 0.59
SOX17-201ENST00000297316 GIFP27352 417 aa18.74■□□□□ 0.59
SOX17-201ENST00000297316 GALK2Q01415 458 aa18.74■□□□□ 0.59
SOX17-201ENST00000297316 GLT8D1Q68CQ7 371 aa18.74■□□□□ 0.59
SOX17-201ENST00000297316 THOC7Q6I9Y2 204 aaKnown RBP18.74■□□□□ 0.59
SOX17-201ENST00000297316 NAA40Q86UY6 237 aa18.74■□□□□ 0.59
SOX17-201ENST00000297316 CREB3L1Q96BA8 519 aa18.74■□□□□ 0.59
SOX17-201ENST00000297316 INTS12Q96CB8 462 aaKnown RBP18.74■□□□□ 0.59
SOX17-201ENST00000297316 FBXO17Q96EF6 278 aa18.74■□□□□ 0.59
SOX17-201ENST00000297316 SLC5A6Q9Y289 635 aa18.74■□□□□ 0.59
SOX17-201ENST00000297316 TRGV5A0A0B4J1U4 118 aa18.74■□□□□ 0.59
SOX17-201ENST00000297316 HTR2CP28335 458 aa18.74■□□□□ 0.59
SOX17-201ENST00000297316 ANKRD16Q6P6B7 361 aa18.74■□□□□ 0.59
SOX17-201ENST00000297316 RHOUQ7L0Q8 258 aa18.74■□□□□ 0.59
SOX17-201ENST00000297316 LUZP2Q86TE4 346 aa18.74■□□□□ 0.59
SOX17-201ENST00000297316 CALHM2Q9HA72 323 aa18.74■□□□□ 0.59
SOX17-201ENST00000297316 TRAV6A0A075B6T7 132 aa18.73■□□□□ 0.59
SOX17-201ENST00000297316 CIB4A0PJX0 185 aa18.73■□□□□ 0.59
SOX17-201ENST00000297316 KRT33AO76009 404 aa18.73■□□□□ 0.59
SOX17-201ENST00000297316 MNDAP41218 407 aa18.73■□□□□ 0.59
SOX17-201ENST00000297316 ZNF84P51523 738 aa18.73■□□□□ 0.59
SOX17-201ENST00000297316 GPR137CQ8N3F9 429 aa18.73■□□□□ 0.59
SOX17-201ENST00000297316 JAGN1Q8N5M9 183 aa18.73■□□□□ 0.59
SOX17-201ENST00000297316 SLA2Q9H6Q3 261 aa18.73■□□□□ 0.59
SOX17-201ENST00000297316 MYEF2Q9P2K5 600 aaKnown RBP18.73■□□□□ 0.59
SOX17-201ENST00000297316 NOSIPQ9Y314 301 aaKnown RBP18.73■□□□□ 0.59
SOX17-201ENST00000297316 ACACAQ13085 2346 aa18.73■□□□□ 0.59
SOX17-201ENST00000297316 SVILO95425 2214 aa18.73■□□□□ 0.59
SOX17-201ENST00000297316 XRCC3O43542 346 aa18.73■□□□□ 0.59
SOX17-201ENST00000297316 SULT1B1O43704 296 aa18.73■□□□□ 0.59
SOX17-201ENST00000297316 GMDSO60547 372 aa18.73■□□□□ 0.59
SOX17-201ENST00000297316 CEACAM4O75871 244 aa18.73■□□□□ 0.59
SOX17-201ENST00000297316 SYNGR4O95473 234 aa18.73■□□□□ 0.59
SOX17-201ENST00000297316 B4GALT1P15291 398 aa18.73■□□□□ 0.59
SOX17-201ENST00000297316 ARSBP15848 533 aa18.73■□□□□ 0.59
SOX17-201ENST00000297316 TSPO2Q5TGU0 170 aa18.73■□□□□ 0.59
SOX17-201ENST00000297316 FAM57BQ71RH2 274 aa18.73■□□□□ 0.59
SOX17-201ENST00000297316 RNF144BQ7Z419 303 aa18.73■□□□□ 0.59
SOX17-201ENST00000297316 ZNF283Q8N7M2 679 aa18.73■□□□□ 0.59
SOX17-201ENST00000297316 OR4D6Q8NGJ1 314 aa18.73■□□□□ 0.59
SOX17-201ENST00000297316 SCNM1Q9BWG6 230 aa18.73■□□□□ 0.59
SOX17-201ENST00000297316 PRRG4Q9BZD6 226 aa18.73■□□□□ 0.59
SOX17-201ENST00000297316 NUDT15Q9NV35 164 aa18.73■□□□□ 0.59
SOX17-201ENST00000297316 RABL2AQ9UBK7 228 aaPredicted RBP18.73■□□□□ 0.59
SOX17-201ENST00000297316 RABL2BQ9UNT1 228 aa18.73■□□□□ 0.59
SOX17-201ENST00000297316 MED12LQ86YW9 2145 aa18.73■□□□□ 0.59
SOX17-201ENST00000297316 PATE4P0C8F1 98 aa18.72■□□□□ 0.59
SOX17-201ENST00000297316 GNALP38405 381 aa18.72■□□□□ 0.59
SOX17-201ENST00000297316 CEACAM16Q2WEN9 425 aa18.72■□□□□ 0.59
SOX17-201ENST00000297316 OR10K2Q6IF99 312 aa18.72■□□□□ 0.59
SOX17-201ENST00000297316 ZNF813Q6ZN06 617 aa18.72■□□□□ 0.59
SOX17-201ENST00000297316 WDYHV1Q96HA8 205 aa18.72■□□□□ 0.59
SOX17-201ENST00000297316 GAL3ST1Q99999 423 aa18.72■□□□□ 0.59
SOX17-201ENST00000297316 NIPAL2Q9H841 368 aa18.72■□□□□ 0.59
SOX17-201ENST00000297316 MOB1AQ9H8S9 216 aa18.72■□□□□ 0.59
SOX17-201ENST00000297316 MCTS1Q9ULC4 181 aaKnown RBP18.72■□□□□ 0.59
SOX17-201ENST00000297316 ATMQ13315 3056 aa18.72■□□□□ 0.59
SOX17-201ENST00000297316 ANKRD11Q6UB99 2663 aaPredicted RBP18.72■□□□□ 0.59
SOX17-201ENST00000297316 IGKV3D-15A0A087WSY6 115 aa18.72■□□□□ 0.59
SOX17-201ENST00000297316 LOC390937A0A1W2PQ73 354 aa18.72■□□□□ 0.59
SOX17-201ENST00000297316 GGT3PA6NGU5 568 aa18.72■□□□□ 0.59
SOX17-201ENST00000297316 ACTL6AO96019 429 aa18.72■□□□□ 0.59
SOX17-201ENST00000297316 TCRBP04435 133 aa18.72■□□□□ 0.59
SOX17-201ENST00000297316 ABOP16442 354 aa18.72■□□□□ 0.59
SOX17-201ENST00000297316 SNTB2Q13425 540 aaKnown RBP18.72■□□□□ 0.59
SOX17-201ENST00000297316 DYRK1AQ13627 763 aa18.72■□□□□ 0.59
SOX17-201ENST00000297316 RSPO1Q2MKA7 263 aaPredicted RBP18.72■□□□□ 0.59
SOX17-201ENST00000297316 ABHD12BQ7Z5M8 362 aaPredicted RBP18.72■□□□□ 0.59
SOX17-201ENST00000297316 TCTE3Q8IZS6 198 aa18.72■□□□□ 0.59
SOX17-201ENST00000297316 OR52N4Q8NGI2 321 aa18.72■□□□□ 0.59
SOX17-201ENST00000297316 FCAMRQ8WWV6 532 aa18.72■□□□□ 0.59
SOX17-201ENST00000297316 DPAGT1Q9H3H5 408 aa18.72■□□□□ 0.59
SOX17-201ENST00000297316 GPR84Q9NQS5 396 aa18.72■□□□□ 0.59
SOX17-201ENST00000297316 ARHGAP21Q5T5U3 1957 aa18.71■□□□□ 0.59
SOX17-201ENST00000297316 A0A1B0GVI7 797 aa18.71■□□□□ 0.59
SOX17-201ENST00000297316 MRPS34P82930 218 aaKnown RBP18.71■□□□□ 0.59
SOX17-201ENST00000297316 GFOD2Q3B7J2 385 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms