RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 FAM27BQ5VT28 67 aa8.04□□□□□ -1.12
PDPN-201ENST00000294489 FAM57BQ71RH2 274 aa8.04□□□□□ -1.12
PDPN-201ENST00000294489 BTN2A1Q7KYR7 527 aa8.04□□□□□ -1.12
PDPN-201ENST00000294489 DOK3Q7L591 496 aa8.04□□□□□ -1.12
PDPN-201ENST00000294489 CDH24Q86UP0 819 aa8.04□□□□□ -1.12
PDPN-201ENST00000294489 SLC22A24Q8N4F4 322 aa8.04□□□□□ -1.12
PDPN-201ENST00000294489 TMEM178AQ8NBL3 297 aa8.04□□□□□ -1.12
PDPN-201ENST00000294489 FDCSPQ8NFU4 85 aa8.04□□□□□ -1.12
PDPN-201ENST00000294489 PTX4Q96A99 478 aa8.04□□□□□ -1.12
PDPN-201ENST00000294489 ADAT3Q96EY9 351 aaPredicted RBP8.04□□□□□ -1.12
PDPN-201ENST00000294489 UQCC2Q9BRT2 126 aa8.04□□□□□ -1.12
PDPN-201ENST00000294489 RANGRFQ9HD47 186 aaPredicted RBP8.04□□□□□ -1.12
PDPN-201ENST00000294489 GPR84Q9NQS5 396 aa8.04□□□□□ -1.12
PDPN-201ENST00000294489 A0A0A6YYH2 397 aa8.04□□□□□ -1.12
PDPN-201ENST00000294489 A6NJ64 397 aa8.04□□□□□ -1.12
PDPN-201ENST00000294489 F5H5K5 113 aa8.04□□□□□ -1.12
PDPN-201ENST00000294489 H2AFB2P0C5Z0 115 aa8.04□□□□□ -1.12
PDPN-201ENST00000294489 PTHLHP12272 177 aa8.04□□□□□ -1.12
PDPN-201ENST00000294489 CPN1P15169 458 aa8.04□□□□□ -1.12
PDPN-201ENST00000294489 PRSS3P35030 304 aa8.04□□□□□ -1.12
PDPN-201ENST00000294489 SLC6A9P48067 706 aa8.04□□□□□ -1.12
PDPN-201ENST00000294489 NKX2-5P52952 324 aaPredicted RBP8.04□□□□□ -1.12
PDPN-201ENST00000294489 PPIAP62937 165 aaKnown RBP8.04□□□□□ -1.12
PDPN-201ENST00000294489 PLGLB1Q02325 96 aa8.04□□□□□ -1.12
PDPN-201ENST00000294489 ELFN2Q5R3F8 820 aa8.04□□□□□ -1.12
PDPN-201ENST00000294489 RIPPLY2Q5TAB7 128 aa8.04□□□□□ -1.12
PDPN-201ENST00000294489 PGAP1Q75T13 922 aa8.04□□□□□ -1.12
PDPN-201ENST00000294489 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.04□□□□□ -1.12
PDPN-201ENST00000294489 OR56B4Q8NH76 319 aa8.04□□□□□ -1.12
PDPN-201ENST00000294489 PGAM5Q96HS1 289 aa8.04□□□□□ -1.12
PDPN-201ENST00000294489 DMRTB1Q96MA1 342 aa8.04□□□□□ -1.12
PDPN-201ENST00000294489 NKX3-1Q99801 234 aaPredicted RBP8.04□□□□□ -1.12
PDPN-201ENST00000294489 SLX1AQ9BQ83 275 aa8.04□□□□□ -1.12
PDPN-201ENST00000294489 PLEK2Q9NYT0 353 aa8.04□□□□□ -1.12
PDPN-201ENST00000294489 POU2F3Q9UKI9 436 aa8.04□□□□□ -1.12
PDPN-201ENST00000294489 KCNMB2Q9Y691 235 aa8.04□□□□□ -1.12
PDPN-201ENST00000294489 CIB4A0PJX0 185 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 METTL21EPA6NDL7 271 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 A6NL46 340 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 H7C417 338 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 IGHG3P01860 377 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 GABRA1P14867 456 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 ARG2P78540 354 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 GFOD2Q3B7J2 385 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 RNFT1Q5M7Z0 435 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 IGFL3Q6UXB1 125 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 DNM1P46Q6ZS02 220 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 OR13C9Q8NGT0 318 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 CPT1CQ8TCG5 803 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 SPTSSAQ969W0 71 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 FAM71F1Q96KD3 344 aaPredicted RBP8.03□□□□□ -1.12
PDPN-201ENST00000294489 BEX2Q9BXY8 128 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 LINC00470Q9BZP3 86 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 SLC6A15Q9H2J7 730 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 KCNK15Q9H427 330 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 METTL17Q9H7H0 456 aaPredicted RBP8.03□□□□□ -1.12
PDPN-201ENST00000294489 CRLF2Q9HC73 371 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 MCUBQ9NWR8 336 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 MTFP1Q9UDX5 166 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 A0A0A6YYJ9 748 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 FAM166BA8MTA8 275 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 ZNF724A8MTY0 619 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 KDM4BO94953 1096 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 CSF1P09603 554 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 PSMB1P20618 241 aaKnown RBP8.03□□□□□ -1.12
PDPN-201ENST00000294489 CCL1P22362 96 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 RFC3P40938 356 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 MRPS15P82914 257 aaKnown RBP8.03□□□□□ -1.12
PDPN-201ENST00000294489 SLC10A1Q14973 349 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 OLFML2AQ68BL7 652 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 SFRP4Q6FHJ7 346 aaPredicted RBP8.03□□□□□ -1.12
PDPN-201ENST00000294489 ZNF627Q7L945 461 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 OR52N4Q8NGI2 321 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 OR4D6Q8NGJ1 314 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 ZNF486Q96H40 463 aaPredicted RBP8.03□□□□□ -1.12
PDPN-201ENST00000294489 ZNF845Q96IR2 970 aaPredicted RBP8.03□□□□□ -1.12
PDPN-201ENST00000294489 MED28Q9H204 178 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 CNTD2Q9H8S5 307 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 BCO1Q9HAY6 547 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 C7orf66A4D0T2 115 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 RAB6AP20340 208 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 ZNF93P35789 620 aaPredicted RBP8.03□□□□□ -1.12
PDPN-201ENST00000294489 SSBP1Q04837 148 aaKnown RBP8.03□□□□□ -1.12
PDPN-201ENST00000294489 PCGF3Q3KNV8 242 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 KRTAP27-1Q3LI81 207 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 NRN1LQ496H8 165 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 RAB12Q6IQ22 244 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 ZNF529Q6P280 563 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 LYPD6Q86Y78 171 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 TCTE3Q8IZS6 198 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 MEIOBQ8N635 442 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 DACT3Q96B18 629 aaPredicted RBP8.03□□□□□ -1.12
PDPN-201ENST00000294489 FYTTD1Q96QD9 318 aaKnown RBP8.03□□□□□ -1.12
PDPN-201ENST00000294489 C20orf85Q9H1P6 137 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 ZNF319Q9P2F9 582 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 RAB22AQ9UL26 194 aa8.03□□□□□ -1.12
PDPN-201ENST00000294489 M0R135 149 aa8.02□□□□□ -1.13
PDPN-201ENST00000294489 SULT1C2O00338 296 aa8.02□□□□□ -1.13
PDPN-201ENST00000294489 LDLRAD4O15165 306 aa8.02□□□□□ -1.13
PDPN-201ENST00000294489 GMDSO60547 372 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 170.2 ms