RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 DCAF12Q5T6F0 453 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 OLIG3Q7RTU3 272 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 AAED1Q7RTV5 226 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 DCXRQ7Z4W1 244 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 PIP4P1Q86T03 277 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 KMT5CQ86Y97 462 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 OR1J1Q8NGS3 322 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 PFN4Q8NHR9 129 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 OR2A14Q96R47 310 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 LYRM4Q9HD34 91 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 C19orf53Q9UNZ5 99 aaPredicted RBP10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 MAP1BP46821 2468 aaKnown RBP10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 OR6C68A6NDL8 312 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 DCTN6O00399 190 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 NME2P1O60361 137 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 EIF4E2O60573 245 aaKnown RBP10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 EIF1BO60739 113 aaKnown RBP10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 ZNF354AO60765 605 aaPredicted RBP10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 MRPL33O75394 65 aaKnown RBP10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 RPL12P30050 165 aaKnown RBP10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 MMP15P51511 669 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 RPL27P61353 136 aaKnown RBP10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 ERV3-1Q14264 604 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 DUSP5Q16690 384 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 DOK3Q7L591 496 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 CARFQ8N187 725 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 C19orf47Q8N9M1 422 aaKnown RBP10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 ZPBPQ9BS86 351 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 TNFRSF12AQ9NP84 129 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 MUC22E2RYF6 1773 aaPredicted RBP10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 LOC107986453A0A1B0GWG9 222 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 PLSCR5A0PG75 271 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 TLCD2A6NGC4 264 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 E5RGE8 158 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 PRAMEF4O60810 478 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 PRKRAO75569 313 aaKnown RBP10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 SBK3P0C264 359 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 SPNP16150 400 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 ARHGAP11BQ3KRB8 267 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 GJC3Q8NFK1 279 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 SDF2Q99470 211 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 CYSLTR2Q9NS75 346 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 GNG12Q9UBI6 72 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 FLVCR2Q9UPI3 526 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 NSG2Q9Y328 171 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 TRAV1-2A0A0B4J238 106 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 CTXN2P0C2S0 81 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 FGF9P31371 208 aaPredicted RBP10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 BCL6P41182 706 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 EIF1P41567 113 aaKnown RBP10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 XAF1Q6GPH4 301 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 TMEM182Q6ZP80 229 aaPredicted RBP10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 OR51A2Q8NGJ7 313 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 TMEM18Q96B42 140 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 ZNF385DQ9H6B1 395 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 MOB1AQ9H8S9 216 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 C12orf10Q9HB07 376 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 CHRNA9Q9UGM1 479 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 PADI1Q9ULC6 663 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 LHX6Q9UPM6 363 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 LOXL2Q9Y4K0 774 aa10.72□□□□□ -0.69
SYNGAP1-201ENST00000293748 TMEM235A6NFC5 223 aa10.71□□□□□ -0.69
SYNGAP1-201ENST00000293748 EPHA2P29317 976 aa10.71□□□□□ -0.69
SYNGAP1-201ENST00000293748 CAPZBP47756 277 aa10.71□□□□□ -0.69
SYNGAP1-201ENST00000293748 TLE1Q04724 770 aa10.71□□□□□ -0.69
SYNGAP1-201ENST00000293748 C1orf140Q5VVS0 124 aa10.71□□□□□ -0.69
SYNGAP1-201ENST00000293748 TMEM88Q6PEY1 159 aa10.71□□□□□ -0.69
SYNGAP1-201ENST00000293748 SHISA6Q6ZSJ9 500 aa10.71□□□□□ -0.69
SYNGAP1-201ENST00000293748 OR4D9Q8NGE8 314 aa10.71□□□□□ -0.69
SYNGAP1-201ENST00000293748 OR4A16Q8NH70 328 aa10.71□□□□□ -0.69
SYNGAP1-201ENST00000293748 PATE1Q8WXA2 126 aa10.71□□□□□ -0.69
SYNGAP1-201ENST00000293748 GAR1Q9NY12 217 aaKnown RBP10.71□□□□□ -0.69
SYNGAP1-201ENST00000293748 GHRLQ9UBU3 117 aa10.71□□□□□ -0.69
SYNGAP1-201ENST00000293748 OSGIN2Q9Y236 505 aa10.71□□□□□ -0.69
SYNGAP1-201ENST00000293748 RALGAPA1Q6GYQ0 2036 aa10.71□□□□□ -0.69
SYNGAP1-201ENST00000293748 CACNA1CQ13936 2221 aa10.71□□□□□ -0.69
SYNGAP1-201ENST00000293748 IGHV1OR21-1A0A087WYE8 117 aa10.71□□□□□ -0.69
SYNGAP1-201ENST00000293748 AQP8O94778 261 aa10.71□□□□□ -0.69
SYNGAP1-201ENST00000293748 ACSM4P0C7M7 580 aa10.71□□□□□ -0.69
SYNGAP1-201ENST00000293748 METTL15P1P0C7V9 234 aa10.71□□□□□ -0.69
SYNGAP1-201ENST00000293748 MGST1P10620 155 aaKnown RBP10.71□□□□□ -0.69
SYNGAP1-201ENST00000293748 SHBQ15464 509 aa10.71□□□□□ -0.69
SYNGAP1-201ENST00000293748 SMIM15Q7Z3B0 74 aa10.71□□□□□ -0.69
SYNGAP1-201ENST00000293748 CMTM3Q96MX0 182 aa10.71□□□□□ -0.69
SYNGAP1-201ENST00000293748 ATF6BQ99941 703 aa10.71□□□□□ -0.69
SYNGAP1-201ENST00000293748 TMEM231Q9H6L2 316 aa10.71□□□□□ -0.69
SYNGAP1-201ENST00000293748 OBP2BQ9NPH6 170 aa10.71□□□□□ -0.69
SYNGAP1-201ENST00000293748 OR5K3A6NET4 321 aa10.71□□□□□ -0.7
SYNGAP1-201ENST00000293748 ZNF727A8MUV8 499 aa10.71□□□□□ -0.7
SYNGAP1-201ENST00000293748 TOX3O15405 576 aaPredicted RBP10.71□□□□□ -0.7
SYNGAP1-201ENST00000293748 DUSP8Q13202 625 aa10.71□□□□□ -0.7
SYNGAP1-201ENST00000293748 RPUSD3Q6P087 351 aaKnown RBP10.71□□□□□ -0.7
SYNGAP1-201ENST00000293748 GRINAQ7Z429 371 aa10.71□□□□□ -0.7
SYNGAP1-201ENST00000293748 CPEB2Q7Z5Q1 589 aaKnown RBP10.71□□□□□ -0.7
SYNGAP1-201ENST00000293748 LRRC18Q8N456 261 aa10.71□□□□□ -0.7
SYNGAP1-201ENST00000293748 MFSD4AQ8N468 514 aa10.71□□□□□ -0.7
SYNGAP1-201ENST00000293748 COMMD1Q8N668 190 aa10.71□□□□□ -0.7
SYNGAP1-201ENST00000293748 HEYLQ9NQ87 328 aaPredicted RBP10.71□□□□□ -0.7
SYNGAP1-201ENST00000293748 MED9Q9NWA0 146 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms