RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 QPCTLQ9NXS2 382 aa11.54□□□□□ -0.56
PTCD1-201ENST00000292478 LAMP3Q9UQV4 416 aa11.54□□□□□ -0.56
PTCD1-201ENST00000292478 ZNF891A8MT65 544 aaPredicted RBP11.54□□□□□ -0.56
PTCD1-201ENST00000292478 MAGEB4O15481 346 aaPredicted RBP11.54□□□□□ -0.56
PTCD1-201ENST00000292478 H2AFB1P0C5Y9 115 aa11.54□□□□□ -0.56
PTCD1-201ENST00000292478 M6PRP20645 277 aa11.54□□□□□ -0.56
PTCD1-201ENST00000292478 EIF3IQ13347 325 aaKnown RBP11.54□□□□□ -0.56
PTCD1-201ENST00000292478 ZNF626Q68DY1 528 aa11.54□□□□□ -0.56
PTCD1-201ENST00000292478 TIMD4Q96H15 378 aa11.54□□□□□ -0.56
PTCD1-201ENST00000292478 SLIRPQ9GZT3 109 aaKnown RBP11.54□□□□□ -0.56
PTCD1-201ENST00000292478 TMEM9BQ9NQ34 198 aa11.54□□□□□ -0.56
PTCD1-201ENST00000292478 WBP1LQ9NX94 342 aa11.54□□□□□ -0.56
PTCD1-201ENST00000292478 GNB3P16520 340 aa11.54□□□□□ -0.56
PTCD1-201ENST00000292478 RAB4AP20338 218 aa11.54□□□□□ -0.56
PTCD1-201ENST00000292478 ABCD3P28288 659 aa11.54□□□□□ -0.56
PTCD1-201ENST00000292478 GZMKP49863 264 aa11.54□□□□□ -0.56
PTCD1-201ENST00000292478 ARRDC1Q8N5I2 433 aa11.54□□□□□ -0.56
PTCD1-201ENST00000292478 SUMF1Q8NBK3 374 aa11.54□□□□□ -0.56
PTCD1-201ENST00000292478 ZNF485Q8NCK3 441 aa11.54□□□□□ -0.56
PTCD1-201ENST00000292478 KTI12Q96EK9 354 aaPredicted RBP11.54□□□□□ -0.56
PTCD1-201ENST00000292478 ZNF416Q9BWM5 594 aa11.54□□□□□ -0.56
PTCD1-201ENST00000292478 HRO43593 1189 aa11.53□□□□□ -0.56
PTCD1-201ENST00000292478 EDN3P14138 238 aa11.53□□□□□ -0.56
PTCD1-201ENST00000292478 GPNMBQ14956 572 aa11.53□□□□□ -0.56
PTCD1-201ENST00000292478 OR5AS1Q8N127 324 aa11.53□□□□□ -0.56
PTCD1-201ENST00000292478 OSR2Q8N2R0 312 aa11.53□□□□□ -0.56
PTCD1-201ENST00000292478 SPSB1Q96BD6 273 aa11.53□□□□□ -0.56
PTCD1-201ENST00000292478 DOK1Q99704 481 aa11.53□□□□□ -0.56
PTCD1-201ENST00000292478 CHST6Q9GZX3 395 aa11.53□□□□□ -0.56
PTCD1-201ENST00000292478 ANKRD34BA5PLL1 514 aa11.53□□□□□ -0.56
PTCD1-201ENST00000292478 ZNF354AO60765 605 aaPredicted RBP11.53□□□□□ -0.56
PTCD1-201ENST00000292478 PRSS23O95084 383 aa11.53□□□□□ -0.56
PTCD1-201ENST00000292478 OR5H8P0DN80 308 aa11.53□□□□□ -0.56
PTCD1-201ENST00000292478 LGALS4P56470 323 aa11.53□□□□□ -0.56
PTCD1-201ENST00000292478 HLA-BQ31612 363 aa11.53□□□□□ -0.56
PTCD1-201ENST00000292478 ST7LQ8TDW4 575 aa11.53□□□□□ -0.56
PTCD1-201ENST00000292478 UQCC2Q9BRT2 126 aa11.53□□□□□ -0.56
PTCD1-201ENST00000292478 RHNO1Q9BSD3 238 aa11.53□□□□□ -0.56
PTCD1-201ENST00000292478 PLA2G2FQ9BZM2 168 aa11.53□□□□□ -0.56
PTCD1-201ENST00000292478 FIGNL2A6NMB9 653 aa11.53□□□□□ -0.56
PTCD1-201ENST00000292478 CRYAAP02489 173 aa11.53□□□□□ -0.56
PTCD1-201ENST00000292478 MGMTP16455 207 aa11.53□□□□□ -0.56
PTCD1-201ENST00000292478 PRAMEF5Q5TYX0 476 aa11.53□□□□□ -0.56
PTCD1-201ENST00000292478 PRAMEF6Q5VXH4 476 aa11.53□□□□□ -0.56
PTCD1-201ENST00000292478 C1orf87Q8N0U7 546 aa11.53□□□□□ -0.56
PTCD1-201ENST00000292478 OR51H1Q8NH63 302 aa11.53□□□□□ -0.56
PTCD1-201ENST00000292478 CIB3Q96Q77 187 aaPredicted RBP11.53□□□□□ -0.56
PTCD1-201ENST00000292478 SHARPINQ9H0F6 387 aa11.53□□□□□ -0.56
PTCD1-201ENST00000292478 SERGEFQ9UGK8 458 aa11.53□□□□□ -0.56
PTCD1-201ENST00000292478 ALG1L2C9J202 215 aa11.53□□□□□ -0.56
PTCD1-201ENST00000292478 PPM1DO15297 605 aa11.53□□□□□ -0.56
PTCD1-201ENST00000292478 TOX3O15405 576 aaPredicted RBP11.53□□□□□ -0.56
PTCD1-201ENST00000292478 CD160O95971 181 aa11.53□□□□□ -0.56
PTCD1-201ENST00000292478 HRH1P35367 487 aa11.53□□□□□ -0.56
PTCD1-201ENST00000292478 ZNF718Q3SXZ3 478 aa11.53□□□□□ -0.56
PTCD1-201ENST00000292478 NUDCD2Q8WVJ2 157 aa11.53□□□□□ -0.56
PTCD1-201ENST00000292478 APOBEC3DQ96AK3 386 aaPredicted RBP11.53□□□□□ -0.56
PTCD1-201ENST00000292478 TRIB1Q96RU8 372 aa11.53□□□□□ -0.56
PTCD1-201ENST00000292478 FAM173AQ9BQD7 235 aa11.53□□□□□ -0.56
PTCD1-201ENST00000292478 CRLF2Q9HC73 371 aa11.53□□□□□ -0.56
PTCD1-201ENST00000292478 LRP12Q9Y561 859 aa11.53□□□□□ -0.56
PTCD1-201ENST00000292478 CTSVO60911 334 aa11.52□□□□□ -0.56
PTCD1-201ENST00000292478 TPPPO94811 219 aa11.52□□□□□ -0.56
PTCD1-201ENST00000292478 TAGLN2P37802 199 aaKnown RBP11.52□□□□□ -0.56
PTCD1-201ENST00000292478 RAG2P55895 527 aa11.52□□□□□ -0.56
PTCD1-201ENST00000292478 RAC1P63000 192 aa11.52□□□□□ -0.56
PTCD1-201ENST00000292478 ZNF117Q03924 483 aa11.52□□□□□ -0.56
PTCD1-201ENST00000292478 SLC25A35Q3KQZ1 300 aa11.52□□□□□ -0.56
PTCD1-201ENST00000292478 APH1BQ8WW43 257 aa11.52□□□□□ -0.56
PTCD1-201ENST00000292478 K7EQM0 130 aa11.52□□□□□ -0.56
PTCD1-201ENST00000292478 MBP02144 154 aa11.52□□□□□ -0.56
PTCD1-201ENST00000292478 GLRA1P23415 457 aa11.52□□□□□ -0.56
PTCD1-201ENST00000292478 DTYMKP23919 212 aa11.52□□□□□ -0.56
PTCD1-201ENST00000292478 FCGR2CP31995 323 aa11.52□□□□□ -0.56
PTCD1-201ENST00000292478 RAB35Q15286 201 aa11.52□□□□□ -0.56
PTCD1-201ENST00000292478 ZNF629Q9UEG4 869 aaPredicted RBP11.52□□□□□ -0.56
PTCD1-201ENST00000292478 SLC22A20A6NK97 555 aa11.52□□□□□ -0.57
PTCD1-201ENST00000292478 TNFSF15O95150 251 aa11.52□□□□□ -0.57
PTCD1-201ENST00000292478 HEXAP06865 529 aa11.52□□□□□ -0.57
PTCD1-201ENST00000292478 TGM1P22735 817 aa11.52□□□□□ -0.57
PTCD1-201ENST00000292478 RPL12P30050 165 aaKnown RBP11.52□□□□□ -0.57
PTCD1-201ENST00000292478 Q6ZRG5 221 aa11.52□□□□□ -0.57
PTCD1-201ENST00000292478 SFT2D1Q8WV19 159 aa11.52□□□□□ -0.57
PTCD1-201ENST00000292478 TXNL1O43396 289 aa11.52□□□□□ -0.57
PTCD1-201ENST00000292478 GALNSP34059 522 aa11.52□□□□□ -0.57
PTCD1-201ENST00000292478 CRYBB2P43320 205 aa11.52□□□□□ -0.57
PTCD1-201ENST00000292478 TAGLNQ01995 201 aaKnown RBP11.52□□□□□ -0.57
PTCD1-201ENST00000292478 SCGB2A2Q13296 93 aa11.52□□□□□ -0.57
PTCD1-201ENST00000292478 FAM74A1Q5RGS3 127 aa11.52□□□□□ -0.57
PTCD1-201ENST00000292478 OR2A2Q6IF42 318 aa11.52□□□□□ -0.57
PTCD1-201ENST00000292478 SLC38A6Q8IZM9 456 aa11.52□□□□□ -0.57
PTCD1-201ENST00000292478 DEFB123Q8N688 67 aa11.52□□□□□ -0.57
PTCD1-201ENST00000292478 OR4C16Q8NGL9 310 aa11.52□□□□□ -0.57
PTCD1-201ENST00000292478 CRISPLD2Q9H0B8 497 aa11.52□□□□□ -0.57
PTCD1-201ENST00000292478 COL5A3P25940 1745 aaPredicted RBP11.52□□□□□ -0.57
PTCD1-201ENST00000292478 BHLHE40O14503 412 aa11.52□□□□□ -0.57
PTCD1-201ENST00000292478 DRD3P35462 400 aa11.52□□□□□ -0.57
PTCD1-201ENST00000292478 MAGEB1P43366 347 aa11.52□□□□□ -0.57
PTCD1-201ENST00000292478 GPR12P47775 334 aa11.52□□□□□ -0.57
PTCD1-201ENST00000292478 UBE2MP61081 183 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms