RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 RAP1BP61224 184 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 H3F3AP84243 136 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 NCMAPQ5T1S8 102 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 ZNF610Q8N9Z0 462 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 TMEM18Q96B42 140 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 MUCL1Q96DR8 90 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 AMDHD1Q96NU7 426 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 IGHV5-10-1A0A0J9YXX1 117 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 A0A1B0GWA3 101 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 FIGNL2A6NMB9 653 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 UTS2O95399 124 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 IGLV3-19P01714 112 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 HPNP05981 417 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 ZNF79Q15937 498 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 MEP1BQ16820 701 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 C11orf87Q6NUJ2 197 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 IL34Q6ZMJ4 242 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 MED25Q71SY5 747 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 SUMF1Q8NBK3 374 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 C8orf44Q96CB5 159 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 BTF3L4Q96K17 158 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 ABHD1Q96SE0 405 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 STACQ99469 402 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 CDH20Q9HBT6 801 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 MOKQ9UQ07 419 aa10.29□□□□□ -0.76
NPC1L1-201ENST00000289547 A0A087X0M5 115 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 A0A1B0GX30 115 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 ARRDC5A6NEK1 342 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 PRKRAO75569 313 aaKnown RBP10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 CRYBA1P05813 215 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 GABRA1P14867 456 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 RHBDD2Q6NTF9 364 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 TMEM123Q8N131 208 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 D2HGDHQ8N465 521 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 PTP4A1Q93096 173 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 TMEM218A2RU14 115 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 SPP1P10451 314 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 BLVRBP30043 206 aaPredicted RBP10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 RPL12P30050 165 aaKnown RBP10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 TMPRSS3P57727 454 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 EEF1A1P68104 462 aaKnown RBP10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 MALLQ13021 153 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 SLC36A2Q495M3 483 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 GLYR1Q49A26 553 aaPredicted RBP10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 ZNF547Q8IVP9 402 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 OR11H7Q8NGC8 314 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 KIRREL1Q96J84 757 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 MIXL1Q9H2W2 232 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 WDR76Q9H967 626 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 CALCRP30988 508 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 RFC3P40938 356 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 LTB4RQ15722 352 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 VAMP3Q15836 100 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 CLEC12BQ2HXU8 276 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 MPEG1Q2M385 716 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 OR5D18Q8NGL1 313 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 SLC25A19Q9HC21 320 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 AP4M1O00189 453 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 SUSD5O60279 629 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 NDUFB6O95139 128 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 ATF1P18846 271 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 PI3P19957 117 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 PMPCAQ10713 525 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 SLC10A1Q14973 349 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 CDK5R1Q15078 307 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 FAM181AQ8N9Y4 354 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 NECAP1Q8NC96 275 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 PFN4Q8NHR9 129 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 BORCS7Q96B45 105 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 SMIM19Q96E16 107 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 PAPOLGQ9BWT3 736 aaKnown RBP10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 ANKRD10Q9NXR5 420 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 RAB22AQ9UL26 194 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 NTNG1Q9Y2I2 539 aa10.28□□□□□ -0.76
NPC1L1-201ENST00000289547 SERINC4A6NH21 518 aa10.27□□□□□ -0.76
NPC1L1-201ENST00000289547 POLR2HP52434 150 aaKnown RBP10.27□□□□□ -0.76
NPC1L1-201ENST00000289547 IHHQ14623 411 aa10.27□□□□□ -0.76
NPC1L1-201ENST00000289547 ZNF750Q32MQ0 723 aa10.27□□□□□ -0.76
NPC1L1-201ENST00000289547 KCNG3Q8TAE7 436 aa10.27□□□□□ -0.76
NPC1L1-201ENST00000289547 CT55Q8WUE5 264 aa10.27□□□□□ -0.76
NPC1L1-201ENST00000289547 RASD2Q96D21 266 aa10.27□□□□□ -0.76
NPC1L1-201ENST00000289547 BARHL1Q9BZE3 327 aa10.27□□□□□ -0.76
NPC1L1-201ENST00000289547 CMC2Q9NRP2 79 aa10.27□□□□□ -0.76
NPC1L1-201ENST00000289547 GPR160Q9UJ42 338 aa10.27□□□□□ -0.76
NPC1L1-201ENST00000289547 GDF2Q9UK05 429 aaPredicted RBP10.27□□□□□ -0.76
NPC1L1-201ENST00000289547 MRPS28Q9Y2Q9 187 aaKnown RBP10.27□□□□□ -0.76
NPC1L1-201ENST00000289547 KCNE1BA0A087WTH5 132 aa10.27□□□□□ -0.77
NPC1L1-201ENST00000289547 LNP1A1A4G5 178 aa10.27□□□□□ -0.77
NPC1L1-201ENST00000289547 GLI4P10075 376 aa10.27□□□□□ -0.77
NPC1L1-201ENST00000289547 SLC35A1P78382 337 aa10.27□□□□□ -0.77
NPC1L1-201ENST00000289547 SLC16A11Q8NCK7 471 aa10.27□□□□□ -0.77
NPC1L1-201ENST00000289547 OR13C8Q8NGS7 320 aa10.27□□□□□ -0.77
NPC1L1-201ENST00000289547 MEGF10Q96KG7 1140 aa10.27□□□□□ -0.77
NPC1L1-201ENST00000289547 Q96M85 177 aa10.27□□□□□ -0.77
NPC1L1-201ENST00000289547 MAP1BP46821 2468 aaKnown RBP10.27□□□□□ -0.77
NPC1L1-201ENST00000289547 HMGN4O00479 90 aa10.27□□□□□ -0.77
NPC1L1-201ENST00000289547 THBS1P07996 1170 aa10.27□□□□□ -0.77
NPC1L1-201ENST00000289547 CD22P20273 847 aa10.27□□□□□ -0.77
NPC1L1-201ENST00000289547 CSRP1P21291 193 aaKnown RBP10.27□□□□□ -0.77
NPC1L1-201ENST00000289547 ETFDHQ16134 617 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms