RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 AKR7LQ8NHP1 331 aa13.87□□□□□ -0.19
SHROOM4-201ENST00000289292 TMPRSS13Q9BYE2 586 aa13.87□□□□□ -0.19
SHROOM4-201ENST00000289292 A0A096LPE4 126 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 A0A1W2PPZ6 126 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 TCRBV16S1A1N1A0A5B0 115 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 MBP02144 154 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 HSD17B7P56937 341 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 ZNF85Q03923 595 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 RTL10Q7L3V2 364 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 H2BFWTQ7Z2G1 175 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 TMEM229BQ8NBD8 167 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 OR52N5Q8NH56 324 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 SLCO1B1Q9Y6L6 691 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 MEIKINA0A087WXM9 373 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 ZNF727A8MUV8 499 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 RAB13P51153 203 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 OR8B8Q15620 311 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 FXNQ16595 210 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 LRP5LA4QPB2 252 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 H7BYZ3 331 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 HOXB3P14651 431 aaPredicted RBP13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 SNCAP37840 140 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 CXCL12P48061 93 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 ZNF528Q3MIS6 628 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 FAM209AQ5JX71 171 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 LAIR1Q6GTX8 287 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 RYDENQ9NUL5 291 aaKnown RBP13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 DUSP13Q9UII6 198 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 RFPL4AA6NLU0 287 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 RFPL4AL1F8VTS6 287 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 OR10J4P0C629 311 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 ZNF787Q6DD87 383 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 OR10D4PQ8NGN7 298 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 ASB16Q96NS5 453 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 TNFSF11O14788 317 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 TGOLN2O43493 480 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 ONECUT2O95948 504 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 CD37P11049 281 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 MYF5P13349 255 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 ELAVL1Q15717 326 aaKnown RBP13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 MAML2Q8IZL2 1156 aaPredicted RBP13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 C10orf111Q8N326 155 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 SLC35G3Q8N808 338 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 OR13D1Q8NGV5 346 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 FAM96BQ9Y3D0 163 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 LRP12Q9Y561 859 aa13.86□□□□□ -0.19
SHROOM4-201ENST00000289292 FAM166BA8MTA8 275 aa13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 EIF1BO60739 113 aaKnown RBP13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 OR2W3Q7Z3T1 314 aa13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 LIMS2Q7Z4I7 341 aa13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 COMMD1Q8N668 190 aa13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 RDH5Q92781 318 aa13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 PLEKHF2Q9H8W4 249 aa13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 PRSS23O95084 383 aa13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 RPS16P62249 146 aaKnown RBP13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 TIAL1Q01085 375 aaKnown RBP eCLIP13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 SP6Q3SY56 376 aa13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 TFAP2EQ6VUC0 442 aa13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 GALNT16Q8N428 558 aa13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 EID2BQ96D98 161 aa13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 WDFY2Q96P53 400 aa13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 CABLES2Q9BTV7 478 aa13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 ADGRL4Q9HBW9 690 aa13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 CAMKMTQ7Z624 323 aa13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 GCNT2Q8N0V5 402 aa13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 PRR13Q9NZ81 148 aa13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 CLCF1Q9UBD9 225 aa13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 E5RGE8 158 aa13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 H3BP45 60 aa13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 DVL1O14640 695 aa13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 ZNF250P15622 560 aa13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 ADRA2CP18825 462 aa13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 DVL1P1P54792 670 aaPredicted RBP13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 PCBP4P57723 403 aaKnown RBP13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 LYPD8Q6UX82 237 aa13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 B9D1Q9UPM9 204 aa13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 NSG2Q9Y328 171 aa13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 COL18A1P39060 1754 aa13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 LIMS3P0CW19 117 aa13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 LIMS4P0CW20 117 aa13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 PCK2Q16822 640 aa13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 ZNF628Q5EBL2 1059 aa13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 SEZ6L2Q6UXD5 910 aa13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 UBL7Q96S82 380 aaPredicted RBP13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 UTP23Q9BRU9 249 aaKnown RBP13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 NUDT9Q9BW91 350 aa13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 MS4A7Q9GZW8 240 aaPredicted RBP13.85□□□□□ -0.19
SHROOM4-201ENST00000289292 AQP8O94778 261 aa13.84□□□□□ -0.19
SHROOM4-201ENST00000289292 NDUFB6O95139 128 aa13.84□□□□□ -0.19
SHROOM4-201ENST00000289292 PDGFBP01127 241 aaPredicted RBP13.84□□□□□ -0.19
SHROOM4-201ENST00000289292 C1QCP02747 245 aa13.84□□□□□ -0.19
SHROOM4-201ENST00000289292 EIF1P41567 113 aaKnown RBP13.84□□□□□ -0.19
SHROOM4-201ENST00000289292 MZT1Q08AG7 82 aa13.84□□□□□ -0.19
SHROOM4-201ENST00000289292 H1FXQ92522 213 aaKnown RBP13.84□□□□□ -0.19
SHROOM4-201ENST00000289292 FBXO34Q9NWN3 711 aa13.84□□□□□ -0.19
SHROOM4-201ENST00000289292 GDF2Q9UK05 429 aaPredicted RBP13.84□□□□□ -0.19
SHROOM4-201ENST00000289292 LINC01553A4QN01 128 aa13.84□□□□□ -0.19
SHROOM4-201ENST00000289292 SOX15O60248 233 aa13.84□□□□□ -0.19
SHROOM4-201ENST00000289292 GLSO94925 669 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms