RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 RPS27AP62979 156 aaKnown RBP16.68■□□□□ 0.26
PCDH1-201ENST00000287008 UBA52P62987 128 aaKnown RBP16.68■□□□□ 0.26
PCDH1-201ENST00000287008 CALHM3Q86XJ0 350 aa16.68■□□□□ 0.26
PCDH1-201ENST00000287008 OR2AK2Q8NG84 335 aa16.68■□□□□ 0.26
PCDH1-201ENST00000287008 OR51A4Q8NGJ6 313 aa16.68■□□□□ 0.26
PCDH1-201ENST00000287008 IL20Q9NYY1 176 aa16.68■□□□□ 0.26
PCDH1-201ENST00000287008 YIF1AO95070 293 aa16.68■□□□□ 0.26
PCDH1-201ENST00000287008 HBE1P02100 147 aa16.68■□□□□ 0.26
PCDH1-201ENST00000287008 ELK1P19419 428 aa16.68■□□□□ 0.26
PCDH1-201ENST00000287008 PTBP1P26599 531 aaKnown RBP eCLIP16.68■□□□□ 0.26
PCDH1-201ENST00000287008 AVPR2P30518 371 aa16.68■□□□□ 0.26
PCDH1-201ENST00000287008 GABRG1Q8N1C3 465 aa16.68■□□□□ 0.26
PCDH1-201ENST00000287008 TMEM217Q8N7C4 229 aa16.68■□□□□ 0.26
PCDH1-201ENST00000287008 OR10D3Q8NH80 312 aa16.68■□□□□ 0.26
PCDH1-201ENST00000287008 SARGQ9BW04 601 aa16.68■□□□□ 0.26
PCDH1-201ENST00000287008 ZNF436Q9C0F3 470 aaPredicted RBP16.68■□□□□ 0.26
PCDH1-201ENST00000287008 RPH3ALQ9UNE2 315 aa16.68■□□□□ 0.26
PCDH1-201ENST00000287008 HPP00738 406 aa16.68■□□□□ 0.26
PCDH1-201ENST00000287008 ADH4P08319 380 aa16.68■□□□□ 0.26
PCDH1-201ENST00000287008 CCR6P51684 374 aa16.68■□□□□ 0.26
PCDH1-201ENST00000287008 USF2Q15853 346 aaPredicted RBP16.68■□□□□ 0.26
PCDH1-201ENST00000287008 ST3GAL6Q9Y274 331 aa16.68■□□□□ 0.26
PCDH1-201ENST00000287008 A0A0B4J2A0 478 aa16.68■□□□□ 0.26
PCDH1-201ENST00000287008 FAHP16930 419 aa16.68■□□□□ 0.26
PCDH1-201ENST00000287008 FXNQ16595 210 aa16.68■□□□□ 0.26
PCDH1-201ENST00000287008 RNF165Q6ZSG1 346 aa16.68■□□□□ 0.26
PCDH1-201ENST00000287008 EDARADDQ8WWZ3 215 aa16.68■□□□□ 0.26
PCDH1-201ENST00000287008 C11orf54Q9H0W9 315 aaPredicted RBP16.68■□□□□ 0.26
PCDH1-201ENST00000287008 NDUFB11Q9NX14 153 aa16.68■□□□□ 0.26
PCDH1-201ENST00000287008 SHPKQ9UHJ6 478 aa16.68■□□□□ 0.26
PCDH1-201ENST00000287008 MDFIC2A0A1B0GVS7 189 aa16.67■□□□□ 0.26
PCDH1-201ENST00000287008 A0A1W2PPC1 479 aa16.67■□□□□ 0.26
PCDH1-201ENST00000287008 OR5H15A6NDH6 313 aa16.67■□□□□ 0.26
PCDH1-201ENST00000287008 SULT1C2O00338 296 aa16.67■□□□□ 0.26
PCDH1-201ENST00000287008 GLI4P10075 376 aa16.67■□□□□ 0.26
PCDH1-201ENST00000287008 AADACP22760 399 aa16.67■□□□□ 0.26
PCDH1-201ENST00000287008 WNT3P56703 355 aa16.67■□□□□ 0.26
PCDH1-201ENST00000287008 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.67■□□□□ 0.26
PCDH1-201ENST00000287008 CNTNAP3Q9BZ76 1288 aa16.67■□□□□ 0.26
PCDH1-201ENST00000287008 SIGLEC7Q9Y286 467 aa16.67■□□□□ 0.26
PCDH1-201ENST00000287008 ZNF83P51522 516 aa16.67■□□□□ 0.26
PCDH1-201ENST00000287008 RPL11P62913 178 aaKnown RBP16.67■□□□□ 0.26
PCDH1-201ENST00000287008 ZNF626Q68DY1 528 aa16.67■□□□□ 0.26
PCDH1-201ENST00000287008 TMEM179BQ7Z7N9 219 aa16.67■□□□□ 0.26
PCDH1-201ENST00000287008 FJX1Q86VR8 437 aa16.67■□□□□ 0.26
PCDH1-201ENST00000287008 CASP8AP2Q9UKL3 1982 aa16.67■□□□□ 0.26
PCDH1-201ENST00000287008 IFITM5A6NNB3 132 aa16.67■□□□□ 0.26
PCDH1-201ENST00000287008 ARPC3O15145 178 aa16.67■□□□□ 0.26
PCDH1-201ENST00000287008 SPRY3O43610 288 aa16.67■□□□□ 0.26
PCDH1-201ENST00000287008 GABRA1P14867 456 aa16.67■□□□□ 0.26
PCDH1-201ENST00000287008 PMS2CLQ68D20 193 aa16.67■□□□□ 0.26
PCDH1-201ENST00000287008 SLC6A13Q9NSD5 602 aa16.67■□□□□ 0.26
PCDH1-201ENST00000287008 SPINT1O43278 529 aa16.66■□□□□ 0.26
PCDH1-201ENST00000287008 FUT6P51993 359 aa16.66■□□□□ 0.26
PCDH1-201ENST00000287008 OR52I2Q8NH67 350 aa16.66■□□□□ 0.26
PCDH1-201ENST00000287008 FGF20Q9NP95 211 aaPredicted RBP16.66■□□□□ 0.26
PCDH1-201ENST00000287008 FAM221AA4D161 298 aa16.66■□□□□ 0.26
PCDH1-201ENST00000287008 GPX5O75715 221 aa16.66■□□□□ 0.26
PCDH1-201ENST00000287008 TPBGQ13641 420 aa16.66■□□□□ 0.26
PCDH1-201ENST00000287008 DRAM2Q6UX65 266 aa16.66■□□□□ 0.26
PCDH1-201ENST00000287008 PRSS42Q7Z5A4 293 aa16.66■□□□□ 0.26
PCDH1-201ENST00000287008 HSD17B11Q8NBQ5 300 aa16.66■□□□□ 0.26
PCDH1-201ENST00000287008 OR8B4Q96RC9 309 aa16.66■□□□□ 0.26
PCDH1-201ENST00000287008 RPS10P5Q9NQ39 176 aa16.66■□□□□ 0.26
PCDH1-201ENST00000287008 DNAJB12Q9NXW2 375 aaKnown RBP16.66■□□□□ 0.26
PCDH1-201ENST00000287008 ADAMTS7Q9UKP4 1686 aa16.66■□□□□ 0.26
PCDH1-201ENST00000287008 F6UZH7 168 aa16.66■□□□□ 0.26
PCDH1-201ENST00000287008 ST8SIA3O43173 380 aa16.66■□□□□ 0.26
PCDH1-201ENST00000287008 CLEC3BP05452 202 aa16.66■□□□□ 0.26
PCDH1-201ENST00000287008 CNR1P21554 472 aa16.66■□□□□ 0.26
PCDH1-201ENST00000287008 CHATP28329 748 aa16.66■□□□□ 0.26
PCDH1-201ENST00000287008 GABRA4P48169 554 aa16.66■□□□□ 0.26
PCDH1-201ENST00000287008 ZIC1Q15915 447 aa16.66■□□□□ 0.26
PCDH1-201ENST00000287008 RTL8BQ17RB0 113 aa16.66■□□□□ 0.26
PCDH1-201ENST00000287008 B3GNTL1Q67FW5 361 aaPredicted RBP16.66■□□□□ 0.26
PCDH1-201ENST00000287008 TMEM108Q6UXF1 575 aa16.66■□□□□ 0.26
PCDH1-201ENST00000287008 CATSPERDQ86XM0 798 aa16.66■□□□□ 0.26
PCDH1-201ENST00000287008 OTOSQ8NHW6 89 aa16.66■□□□□ 0.26
PCDH1-201ENST00000287008 AP1S3Q96PC3 154 aa16.66■□□□□ 0.26
PCDH1-201ENST00000287008 TECTBQ96PL2 329 aa16.66■□□□□ 0.26
PCDH1-201ENST00000287008 RASL10BQ96S79 203 aa16.66■□□□□ 0.26
PCDH1-201ENST00000287008 ZNF2Q9BSG1 426 aaPredicted RBP16.66■□□□□ 0.26
PCDH1-201ENST00000287008 SERTM1A2A2V5 107 aa16.66■□□□□ 0.26
PCDH1-201ENST00000287008 AGAP14A8MT82 685 aa16.66■□□□□ 0.26
PCDH1-201ENST00000287008 FADS1O60427 444 aa16.66■□□□□ 0.26
PCDH1-201ENST00000287008 SLC36A1Q7Z2H8 476 aa16.66■□□□□ 0.26
PCDH1-201ENST00000287008 OR13C5Q8NGS8 318 aa16.66■□□□□ 0.26
PCDH1-201ENST00000287008 FAM213BQ8TBF2 198 aa16.66■□□□□ 0.26
PCDH1-201ENST00000287008 PCOLCE2Q9UKZ9 415 aa16.66■□□□□ 0.26
PCDH1-201ENST00000287008 TMEM200CA6NKL6 621 aa16.65■□□□□ 0.26
PCDH1-201ENST00000287008 DFFBO76075 338 aa16.65■□□□□ 0.26
PCDH1-201ENST00000287008 OR8U8P0C7N1 319 aa16.65■□□□□ 0.26
PCDH1-201ENST00000287008 EPHA2P29317 976 aa16.65■□□□□ 0.26
PCDH1-201ENST00000287008 NKX2-1P43699 371 aaPredicted RBP16.65■□□□□ 0.26
PCDH1-201ENST00000287008 TLE4Q04727 773 aa16.65■□□□□ 0.26
PCDH1-201ENST00000287008 RAB35Q15286 201 aa16.65■□□□□ 0.26
PCDH1-201ENST00000287008 OR10K2Q6IF99 312 aa16.65■□□□□ 0.26
PCDH1-201ENST00000287008 ZG16BQ96DA0 208 aa16.65■□□□□ 0.26
PCDH1-201ENST00000287008 FLVCR1Q9Y5Y0 555 aa16.65■□□□□ 0.26
PCDH1-201ENST00000287008 TERTO14746 1132 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms