RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 BPIFB2Q8N4F0 458 aa16.28■□□□□ 0.2
PDLIM3-201ENST00000284767 ZBTB8AQ96BR9 441 aa16.28■□□□□ 0.2
PDLIM3-201ENST00000284767 NARS2Q96I59 477 aaKnown RBP16.28■□□□□ 0.2
PDLIM3-201ENST00000284767 ZNF75AQ96N20 296 aa16.28■□□□□ 0.2
PDLIM3-201ENST00000284767 CMKLR1Q99788 373 aa16.28■□□□□ 0.2
PDLIM3-201ENST00000284767 LOC102723996A0A087X1L8 192 aa16.28■□□□□ 0.2
PDLIM3-201ENST00000284767 OR14I1A6ND48 311 aa16.28■□□□□ 0.2
PDLIM3-201ENST00000284767 SIGLEC5O15389 551 aa16.28■□□□□ 0.2
PDLIM3-201ENST00000284767 HLA-AP01891 365 aaKnown RBP16.28■□□□□ 0.2
PDLIM3-201ENST00000284767 CD2P06729 351 aa16.28■□□□□ 0.2
PDLIM3-201ENST00000284767 FSTP19883 344 aa16.28■□□□□ 0.2
PDLIM3-201ENST00000284767 MEF2DQ14814 521 aa16.28■□□□□ 0.2
PDLIM3-201ENST00000284767 TAF13Q15543 124 aa16.28■□□□□ 0.2
PDLIM3-201ENST00000284767 SHEQ5VZ18 495 aa16.28■□□□□ 0.2
PDLIM3-201ENST00000284767 ADGRE4PQ86SQ3 457 aa16.28■□□□□ 0.2
PDLIM3-201ENST00000284767 TMEM234Q8WY98 164 aa16.28■□□□□ 0.2
PDLIM3-201ENST00000284767 SPACA9Q96E40 222 aaPredicted RBP16.28■□□□□ 0.2
PDLIM3-201ENST00000284767 LOXL2Q9Y4K0 774 aa16.28■□□□□ 0.2
PDLIM3-201ENST00000284767 WIF1Q9Y5W5 379 aa16.28■□□□□ 0.2
PDLIM3-201ENST00000284767 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.27■□□□□ 0.2
PDLIM3-201ENST00000284767 DISC1C4P0D8 188 aa16.27■□□□□ 0.2
PDLIM3-201ENST00000284767 FTCDNL1E5RQL4 147 aa16.27■□□□□ 0.2
PDLIM3-201ENST00000284767 PLPP3O14495 311 aa16.27■□□□□ 0.2
PDLIM3-201ENST00000284767 DKK1O94907 266 aa16.27■□□□□ 0.2
PDLIM3-201ENST00000284767 MT-ATP6P00846 226 aa16.27■□□□□ 0.2
PDLIM3-201ENST00000284767 OR13C8Q8NGS7 320 aa16.27■□□□□ 0.2
PDLIM3-201ENST00000284767 RNF138Q8WVD3 245 aa16.27■□□□□ 0.2
PDLIM3-201ENST00000284767 IMMP1LQ96LU5 166 aa16.27■□□□□ 0.2
PDLIM3-201ENST00000284767 FAM117AQ9C073 453 aa16.27■□□□□ 0.2
PDLIM3-201ENST00000284767 ZNF160Q9HCG1 818 aa16.27■□□□□ 0.2
PDLIM3-201ENST00000284767 SLC2A8Q9NY64 477 aa16.27■□□□□ 0.2
PDLIM3-201ENST00000284767 NXT1Q9UKK6 140 aaKnown RBP16.27■□□□□ 0.2
PDLIM3-201ENST00000284767 KNTC1P50748 2209 aa16.27■□□□□ 0.19
PDLIM3-201ENST00000284767 DXOO77932 396 aaKnown RBP16.27■□□□□ 0.19
PDLIM3-201ENST00000284767 STK17BO94768 372 aa16.27■□□□□ 0.19
PDLIM3-201ENST00000284767 IGFBP3P17936 291 aaPredicted RBP16.27■□□□□ 0.19
PDLIM3-201ENST00000284767 ROM1Q03395 351 aa16.27■□□□□ 0.19
PDLIM3-201ENST00000284767 GLYATL3Q5SZD4 288 aa16.27■□□□□ 0.19
PDLIM3-201ENST00000284767 SLC18B1Q6NT16 456 aa16.27■□□□□ 0.19
PDLIM3-201ENST00000284767 OR2Y1Q8NGV0 311 aa16.27■□□□□ 0.19
PDLIM3-201ENST00000284767 SLC22A8Q8TCC7 542 aa16.27■□□□□ 0.19
PDLIM3-201ENST00000284767 PPP1R1CQ8WVI7 109 aa16.27■□□□□ 0.19
PDLIM3-201ENST00000284767 SLC22A13Q9Y226 551 aa16.27■□□□□ 0.19
PDLIM3-201ENST00000284767 G3V3Y1 287 aa16.26■□□□□ 0.19
PDLIM3-201ENST00000284767 H7C2Y5 167 aa16.26■□□□□ 0.19
PDLIM3-201ENST00000284767 XKRYO14609 159 aa16.26■□□□□ 0.19
PDLIM3-201ENST00000284767 CDX4O14627 284 aaPredicted RBP16.26■□□□□ 0.19
PDLIM3-201ENST00000284767 OR6A2O95222 327 aa16.26■□□□□ 0.19
PDLIM3-201ENST00000284767 CENPAP49450 140 aa16.26■□□□□ 0.19
PDLIM3-201ENST00000284767 INSM1Q01101 510 aaPredicted RBP16.26■□□□□ 0.19
PDLIM3-201ENST00000284767 PMPCAQ10713 525 aa16.26■□□□□ 0.19
PDLIM3-201ENST00000284767 NDUFAF7Q7L592 441 aa16.26■□□□□ 0.19
PDLIM3-201ENST00000284767 TIPARPQ7Z3E1 657 aaKnown RBP16.26■□□□□ 0.19
PDLIM3-201ENST00000284767 SLC25A42Q86VD7 318 aa16.26■□□□□ 0.19
PDLIM3-201ENST00000284767 ASB5Q8WWX0 329 aa16.26■□□□□ 0.19
PDLIM3-201ENST00000284767 ST8SIA1Q92185 356 aa16.26■□□□□ 0.19
PDLIM3-201ENST00000284767 PRRT1Q99946 306 aa16.26■□□□□ 0.19
PDLIM3-201ENST00000284767 PISDQ9UG56 409 aa16.26■□□□□ 0.19
PDLIM3-201ENST00000284767 MEGF11A6BM72 1044 aa16.26■□□□□ 0.19
PDLIM3-201ENST00000284767 ZBTB25P24278 435 aa16.26■□□□□ 0.19
PDLIM3-201ENST00000284767 CASRP41180 1078 aa16.26■□□□□ 0.19
PDLIM3-201ENST00000284767 ZNF528Q3MIS6 628 aa16.26■□□□□ 0.19
PDLIM3-201ENST00000284767 LYG2Q86SG7 212 aa16.26■□□□□ 0.19
PDLIM3-201ENST00000284767 SVBPQ8N300 66 aa16.26■□□□□ 0.19
PDLIM3-201ENST00000284767 POC1BQ8TC44 478 aa16.26■□□□□ 0.19
PDLIM3-201ENST00000284767 PTX4Q96A99 478 aa16.26■□□□□ 0.19
PDLIM3-201ENST00000284767 SAV1Q9H4B6 383 aaPredicted RBP16.26■□□□□ 0.19
PDLIM3-201ENST00000284767 GTF2A1LQ9UNN4 478 aa16.26■□□□□ 0.19
PDLIM3-201ENST00000284767 CHCHD2Q9Y6H1 151 aaPredicted RBP16.26■□□□□ 0.19
PDLIM3-201ENST00000284767 LDLRAD4O15165 306 aa16.25■□□□□ 0.19
PDLIM3-201ENST00000284767 PNPP00491 289 aa16.25■□□□□ 0.19
PDLIM3-201ENST00000284767 HLA-DQA2P01906 255 aa16.25■□□□□ 0.19
PDLIM3-201ENST00000284767 MPZP25189 248 aa16.25■□□□□ 0.19
PDLIM3-201ENST00000284767 RPL27P61353 136 aaKnown RBP16.25■□□□□ 0.19
PDLIM3-201ENST00000284767 SCGB2B2Q4G0G5 96 aa16.25■□□□□ 0.19
PDLIM3-201ENST00000284767 ZNF584Q8IVC4 421 aa16.25■□□□□ 0.19
PDLIM3-201ENST00000284767 ARMC10Q8N2F6 343 aa16.25■□□□□ 0.19
PDLIM3-201ENST00000284767 WDSUB1Q8N9V3 476 aa16.25■□□□□ 0.19
PDLIM3-201ENST00000284767 ZNF519Q8TB69 540 aa16.25■□□□□ 0.19
PDLIM3-201ENST00000284767 TSNAXQ99598 290 aaKnown RBP16.25■□□□□ 0.19
PDLIM3-201ENST00000284767 SLC6A7Q99884 636 aa16.25■□□□□ 0.19
PDLIM3-201ENST00000284767 TAS2R4Q9NYW5 299 aa16.25■□□□□ 0.19
PDLIM3-201ENST00000284767 PCDHB10Q9UN67 800 aa16.25■□□□□ 0.19
PDLIM3-201ENST00000284767 B9D1Q9UPM9 204 aa16.25■□□□□ 0.19
PDLIM3-201ENST00000284767 FARSAQ9Y285 508 aaKnown RBP16.25■□□□□ 0.19
PDLIM3-201ENST00000284767 ASPMQ8IZT6 3477 aa16.25■□□□□ 0.19
PDLIM3-201ENST00000284767 TMEM218A2RU14 115 aa16.25■□□□□ 0.19
PDLIM3-201ENST00000284767 MS4A18H0YCH9 400 aa16.25■□□□□ 0.19
PDLIM3-201ENST00000284767 IL2RAP01589 272 aa16.25■□□□□ 0.19
PDLIM3-201ENST00000284767 CD59P13987 128 aa16.25■□□□□ 0.19
PDLIM3-201ENST00000284767 CTLA4P16410 223 aa16.25■□□□□ 0.19
PDLIM3-201ENST00000284767 ARHGDIBP52566 201 aa16.25■□□□□ 0.19
PDLIM3-201ENST00000284767 ATP1B3P54709 279 aa16.25■□□□□ 0.19
PDLIM3-201ENST00000284767 PLPPR5Q32ZL2 321 aa16.25■□□□□ 0.19
PDLIM3-201ENST00000284767 MS4A18Q3C1V0 323 aa16.25■□□□□ 0.19
PDLIM3-201ENST00000284767 LRRC37A5PQ49AS3 106 aa16.25■□□□□ 0.19
PDLIM3-201ENST00000284767 KCTD18Q6PI47 426 aaPredicted RBP16.25■□□□□ 0.19
PDLIM3-201ENST00000284767 SLC35D2Q76EJ3 337 aa16.25■□□□□ 0.19
PDLIM3-201ENST00000284767 THAP6Q8TBB0 222 aa16.25■□□□□ 0.19
PDLIM3-201ENST00000284767 ZNF700Q9H0M5 742 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms