RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 AARDQ4LEZ3 155 aa14.92□□□□□ -0.02
SH3RF1-201ENST00000284637 NECAP1Q8NC96 275 aa14.92□□□□□ -0.02
SH3RF1-201ENST00000284637 CMTM3Q96MX0 182 aa14.92□□□□□ -0.02
SH3RF1-201ENST00000284637 HIF1ANQ9NWT6 349 aa14.92□□□□□ -0.02
SH3RF1-201ENST00000284637 GDF2Q9UK05 429 aaPredicted RBP14.92□□□□□ -0.02
SH3RF1-201ENST00000284637 SLCO1B1Q9Y6L6 691 aa14.92□□□□□ -0.02
SH3RF1-201ENST00000284637 NRG2O14511 850 aaPredicted RBP14.92□□□□□ -0.02
SH3RF1-201ENST00000284637 EGR3Q06889 387 aa14.92□□□□□ -0.02
SH3RF1-201ENST00000284637 KIRREL2Q6UWL6 708 aa14.92□□□□□ -0.02
SH3RF1-201ENST00000284637 FAM24BQ8N5W8 94 aa14.92□□□□□ -0.02
SH3RF1-201ENST00000284637 OR10J5Q8NHC4 309 aa14.92□□□□□ -0.02
SH3RF1-201ENST00000284637 EMG1Q92979 244 aaKnown RBP14.92□□□□□ -0.02
SH3RF1-201ENST00000284637 GRPP07492 148 aa14.92□□□□□ -0.02
SH3RF1-201ENST00000284637 THBS3P49746 956 aa14.92□□□□□ -0.02
SH3RF1-201ENST00000284637 RUNX2Q13950 521 aa14.92□□□□□ -0.02
SH3RF1-201ENST00000284637 LYG2Q86SG7 212 aa14.92□□□□□ -0.02
SH3RF1-201ENST00000284637 OR5M9Q8NGP3 310 aa14.92□□□□□ -0.02
SH3RF1-201ENST00000284637 OR51F2Q8NH61 342 aa14.92□□□□□ -0.02
SH3RF1-201ENST00000284637 PRSS37A4D1T9 235 aa14.91□□□□□ -0.02
SH3RF1-201ENST00000284637 ICOSLGO75144 302 aa14.91□□□□□ -0.02
SH3RF1-201ENST00000284637 CRYBA1P05813 215 aa14.91□□□□□ -0.02
SH3RF1-201ENST00000284637 CD46P15529 392 aa14.91□□□□□ -0.02
SH3RF1-201ENST00000284637 CXCL3P19876 107 aa14.91□□□□□ -0.02
SH3RF1-201ENST00000284637 UTP23Q9BRU9 249 aaKnown RBP14.91□□□□□ -0.02
SH3RF1-201ENST00000284637 PLEKHA2Q9HB19 425 aa14.91□□□□□ -0.02
SH3RF1-201ENST00000284637 SULT1A3P0DMM9 295 aa14.91□□□□□ -0.02
SH3RF1-201ENST00000284637 SULT1A4P0DMN0 295 aa14.91□□□□□ -0.02
SH3RF1-201ENST00000284637 SPP1P10451 314 aa14.91□□□□□ -0.02
SH3RF1-201ENST00000284637 SSBP1Q04837 148 aaKnown RBP14.91□□□□□ -0.02
SH3RF1-201ENST00000284637 TSLPQ969D9 159 aa14.91□□□□□ -0.02
SH3RF1-201ENST00000284637 IGHV3-64DA0A0J9YX35 117 aa14.91□□□□□ -0.02
SH3RF1-201ENST00000284637 KIR2DS1A0A191URI9 304 aa14.91□□□□□ -0.02
SH3RF1-201ENST00000284637 ENSAO43768 121 aaKnown RBP14.91□□□□□ -0.02
SH3RF1-201ENST00000284637 PDGFBP01127 241 aaPredicted RBP14.91□□□□□ -0.02
SH3RF1-201ENST00000284637 APOA2P02652 100 aa14.91□□□□□ -0.02
SH3RF1-201ENST00000284637 ATF1P18846 271 aa14.91□□□□□ -0.02
SH3RF1-201ENST00000284637 KIR2DS4P43632 304 aa14.91□□□□□ -0.02
SH3RF1-201ENST00000284637 KIR2DS1Q14954 304 aa14.91□□□□□ -0.02
SH3RF1-201ENST00000284637 CA13Q8N1Q1 262 aa14.91□□□□□ -0.02
SH3RF1-201ENST00000284637 RBMXL3Q8N7X1 1067 aaKnown RBP14.91□□□□□ -0.02
SH3RF1-201ENST00000284637 OR2W5A6NFC9 320 aa14.91□□□□□ -0.02
SH3RF1-201ENST00000284637 TNFRSF10CO14798 259 aa14.91□□□□□ -0.02
SH3RF1-201ENST00000284637 LY86O95711 162 aa14.91□□□□□ -0.02
SH3RF1-201ENST00000284637 ETFDHQ16134 617 aa14.91□□□□□ -0.02
SH3RF1-201ENST00000284637 OR8U1Q8NH10 309 aa14.91□□□□□ -0.02
SH3RF1-201ENST00000284637 BAHD1Q8TBE0 780 aaPredicted RBP14.91□□□□□ -0.02
SH3RF1-201ENST00000284637 FBXO4Q9UKT5 387 aa14.91□□□□□ -0.02
SH3RF1-201ENST00000284637 DEGS1O15121 323 aa14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 SSSCA1O60232 199 aa14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 AVPR2P30518 371 aa14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 KCNJ3P48549 501 aa14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 DVL1P1P54792 670 aaPredicted RBP14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 OVCH2Q7RTZ1 564 aa14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 MUCL1Q96DR8 90 aa14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 TPPP3Q9BW30 176 aa14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 N4BP2Q86UW6 1770 aaPredicted RBP14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 XRCC2O43543 280 aa14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 ADRA2CP18825 462 aa14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 SPANXN5Q5MJ07 72 aa14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 TMEM268Q5VZI3 342 aa14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 PARM1Q6UWI2 310 aa14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 OR4S1Q8NGB4 309 aa14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 GPR119Q8TDV5 335 aa14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 C6orf106Q9H6K1 298 aaPredicted RBP14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 DYNLRB1Q9NP97 96 aa14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 LRP3O75074 770 aa14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 MYOGP15173 224 aa14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 PPICP45877 212 aa14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 WNT3P56703 355 aa14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 COL19A1Q14993 1142 aa14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 KIAA0040Q15053 153 aa14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 TOMM34Q15785 309 aaPredicted RBP14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 AGBL4Q5VU57 503 aa14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 ASB16Q96NS5 453 aa14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 NXF2Q9GZY0 626 aaKnown RBP14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 OR6C68A6NDL8 312 aa14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 M0R143 59 aa14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 GSTP1P09211 210 aaKnown RBP14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 CLEC12BQ2HXU8 276 aa14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 GGNBP1Q5YKI7 109 aa14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 GCNT2Q8N0V5 402 aa14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 TVP23CQ96ET8 276 aa14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 BARHL1Q9BZE3 327 aa14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 RYDENQ9NUL5 291 aaKnown RBP14.9□□□□□ -0.02
SH3RF1-201ENST00000284637 ZNF727A8MUV8 499 aa14.89□□□□□ -0.03
SH3RF1-201ENST00000284637 WDR1O75083 606 aa14.89□□□□□ -0.03
SH3RF1-201ENST00000284637 ABCD3P28288 659 aa14.89□□□□□ -0.03
SH3RF1-201ENST00000284637 ZNF79Q15937 498 aa14.89□□□□□ -0.03
SH3RF1-201ENST00000284637 ZNF468Q5VIY5 522 aaPredicted RBP14.89□□□□□ -0.03
SH3RF1-201ENST00000284637 TFAP2EQ6VUC0 442 aa14.89□□□□□ -0.03
SH3RF1-201ENST00000284637 SLC25A43Q8WUT9 341 aaPredicted RBP14.89□□□□□ -0.03
SH3RF1-201ENST00000284637 EDAQ92838 391 aa14.89□□□□□ -0.03
SH3RF1-201ENST00000284637 MAGT1Q9H0U3 335 aa14.89□□□□□ -0.03
SH3RF1-201ENST00000284637 C12orf49Q9H741 205 aa14.89□□□□□ -0.03
SH3RF1-201ENST00000284637 KCND3Q9UK17 655 aa14.89□□□□□ -0.03
SH3RF1-201ENST00000284637 HS3ST3A1Q9Y663 406 aa14.89□□□□□ -0.03
SH3RF1-201ENST00000284637 SHROOM3Q8TF72 1996 aa14.89□□□□□ -0.03
SH3RF1-201ENST00000284637 ZNF732B4DXR9 585 aa14.89□□□□□ -0.03
SH3RF1-201ENST00000284637 HYAL3O43820 417 aaPredicted RBP14.89□□□□□ -0.03
SH3RF1-201ENST00000284637 OR5H8P0DN80 308 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms