RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 SEC61A1P61619 476 aaKnown RBP12.13□□□□□ -0.47
HMGN3-201ENST00000275036 BTG1P62324 171 aa12.13□□□□□ -0.47
HMGN3-201ENST00000275036 MALLQ13021 153 aa12.13□□□□□ -0.47
HMGN3-201ENST00000275036 MAB21L1Q13394 359 aa12.13□□□□□ -0.47
HMGN3-201ENST00000275036 TMEM236Q5W0B7 351 aa12.13□□□□□ -0.47
HMGN3-201ENST00000275036 PLBD1Q6P4A8 553 aa12.13□□□□□ -0.47
HMGN3-201ENST00000275036 SHQ1Q6PI26 577 aaKnown RBP12.13□□□□□ -0.47
HMGN3-201ENST00000275036 DRAM2Q6UX65 266 aa12.13□□□□□ -0.47
HMGN3-201ENST00000275036 PGAP1Q75T13 922 aa12.13□□□□□ -0.47
HMGN3-201ENST00000275036 PEG10Q86TG7 708 aaKnown RBP12.13□□□□□ -0.47
HMGN3-201ENST00000275036 LRRC28Q86X40 367 aaPredicted RBP12.13□□□□□ -0.47
HMGN3-201ENST00000275036 TIGD4Q8IY51 512 aa12.13□□□□□ -0.47
HMGN3-201ENST00000275036 RFLNBQ8N5W9 214 aa12.13□□□□□ -0.47
HMGN3-201ENST00000275036 OR6N2Q8NGY6 317 aa12.13□□□□□ -0.47
HMGN3-201ENST00000275036 ZMYND19Q96E35 227 aaPredicted RBP12.13□□□□□ -0.47
HMGN3-201ENST00000275036 INTS14Q96SY0 518 aa12.13□□□□□ -0.47
HMGN3-201ENST00000275036 KCNJ15Q99712 375 aa12.13□□□□□ -0.47
HMGN3-201ENST00000275036 OR51V1Q9H2C8 321 aa12.13□□□□□ -0.47
HMGN3-201ENST00000275036 YY1AP1Q9H869 796 aa12.13□□□□□ -0.47
HMGN3-201ENST00000275036 TMEM100Q9NV29 134 aa12.13□□□□□ -0.47
HMGN3-201ENST00000275036 CD300LBA8K4G0 201 aa12.12□□□□□ -0.47
HMGN3-201ENST00000275036 TCF21O43680 179 aa12.12□□□□□ -0.47
HMGN3-201ENST00000275036 ZNF205O95201 554 aa12.12□□□□□ -0.47
HMGN3-201ENST00000275036 VENTXO95231 258 aa12.12□□□□□ -0.47
HMGN3-201ENST00000275036 CYB5R3P00387 301 aaPredicted RBP12.12□□□□□ -0.47
HMGN3-201ENST00000275036 GSTT1P30711 240 aa12.12□□□□□ -0.47
HMGN3-201ENST00000275036 BLVRAP53004 296 aa12.12□□□□□ -0.47
HMGN3-201ENST00000275036 LCN2P80188 198 aa12.12□□□□□ -0.47
HMGN3-201ENST00000275036 EIF2B1Q14232 305 aaKnown RBP12.12□□□□□ -0.47
HMGN3-201ENST00000275036 MRPL21Q7Z2W9 205 aaKnown RBP12.12□□□□□ -0.47
HMGN3-201ENST00000275036 MOGAT3Q86VF5 341 aa12.12□□□□□ -0.47
HMGN3-201ENST00000275036 BBS1Q8NFJ9 593 aa12.12□□□□□ -0.47
HMGN3-201ENST00000275036 SEMA6DQ8NFY4 1073 aa12.12□□□□□ -0.47
HMGN3-201ENST00000275036 ABHD6Q9BV23 337 aa12.12□□□□□ -0.47
HMGN3-201ENST00000275036 ZNF556Q9HAH1 456 aa12.12□□□□□ -0.47
HMGN3-201ENST00000275036 PATZ1Q9HBE1 687 aaKnown RBP12.12□□□□□ -0.47
HMGN3-201ENST00000275036 SLC25A19Q9HC21 320 aa12.12□□□□□ -0.47
HMGN3-201ENST00000275036 PRR23D1E9PI22 279 aaPredicted RBP12.11□□□□□ -0.47
HMGN3-201ENST00000275036 F5H0A9 414 aaPredicted RBP12.11□□□□□ -0.47
HMGN3-201ENST00000275036 SELENOFO60613 162 aa12.11□□□□□ -0.47
HMGN3-201ENST00000275036 RGS9O75916 674 aaPredicted RBP12.11□□□□□ -0.47
HMGN3-201ENST00000275036 PRR23D2P0DMB1 279 aaPredicted RBP12.11□□□□□ -0.47
HMGN3-201ENST00000275036 ADRA2CP18825 462 aa12.11□□□□□ -0.47
HMGN3-201ENST00000275036 CA6P23280 308 aa12.11□□□□□ -0.47
HMGN3-201ENST00000275036 SRP9P49458 86 aaKnown RBP12.11□□□□□ -0.47
HMGN3-201ENST00000275036 DAPP51397 102 aa12.11□□□□□ -0.47
HMGN3-201ENST00000275036 HOXA4Q00056 320 aaPredicted RBP12.11□□□□□ -0.47
HMGN3-201ENST00000275036 TAF13Q15543 124 aa12.11□□□□□ -0.47
HMGN3-201ENST00000275036 TMEM155Q4W5P6 130 aa12.11□□□□□ -0.47
HMGN3-201ENST00000275036 FAM201AQ5SY85 155 aa12.11□□□□□ -0.47
HMGN3-201ENST00000275036 FAHD1Q6P587 224 aa12.11□□□□□ -0.47
HMGN3-201ENST00000275036 PRSS45Q7RTY3 260 aa12.11□□□□□ -0.47
HMGN3-201ENST00000275036 CPOQ8IVL8 374 aa12.11□□□□□ -0.47
HMGN3-201ENST00000275036 RNF133Q8WVZ7 376 aa12.11□□□□□ -0.47
HMGN3-201ENST00000275036 SPRYD4Q8WW59 207 aaPredicted RBP12.11□□□□□ -0.47
HMGN3-201ENST00000275036 DVL3Q92997 716 aaPredicted RBP12.11□□□□□ -0.47
HMGN3-201ENST00000275036 NRBF2Q96F24 287 aa12.11□□□□□ -0.47
HMGN3-201ENST00000275036 OPN4Q9UHM6 478 aa12.11□□□□□ -0.47
HMGN3-201ENST00000275036 METRNQ9UJH8 293 aa12.11□□□□□ -0.47
HMGN3-201ENST00000275036 N6AMT1Q9Y5N5 214 aa12.11□□□□□ -0.47
HMGN3-201ENST00000275036 HMGN1P05114 100 aa12.1□□□□□ -0.47
HMGN3-201ENST00000275036 PAICSP22234 425 aaKnown RBP12.1□□□□□ -0.47
HMGN3-201ENST00000275036 SLC2A5P22732 501 aa12.1□□□□□ -0.47
HMGN3-201ENST00000275036 MDH2P40926 338 aaKnown RBP12.1□□□□□ -0.47
HMGN3-201ENST00000275036 OPRL1P41146 370 aa12.1□□□□□ -0.47
HMGN3-201ENST00000275036 CD200P41217 278 aa12.1□□□□□ -0.47
HMGN3-201ENST00000275036 GATA4P43694 442 aa12.1□□□□□ -0.47
HMGN3-201ENST00000275036 CX3CR1P49238 355 aa12.1□□□□□ -0.47
HMGN3-201ENST00000275036 RAD23AP54725 363 aa12.1□□□□□ -0.47
HMGN3-201ENST00000275036 GRB2P62993 217 aaKnown RBP12.1□□□□□ -0.47
HMGN3-201ENST00000275036 MPPED2Q15777 294 aa12.1□□□□□ -0.47
HMGN3-201ENST00000275036 PRAMEF6Q5VXH4 476 aa12.1□□□□□ -0.47
HMGN3-201ENST00000275036 SPICQ8N5J4 248 aa12.1□□□□□ -0.47
HMGN3-201ENST00000275036 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.1□□□□□ -0.47
HMGN3-201ENST00000275036 SPSB4Q96A44 273 aa12.1□□□□□ -0.47
HMGN3-201ENST00000275036 TMEM165Q9HC07 324 aa12.1□□□□□ -0.47
HMGN3-201ENST00000275036 MMP26Q9NRE1 261 aa12.1□□□□□ -0.47
HMGN3-201ENST00000275036 ZNF319Q9P2F9 582 aa12.1□□□□□ -0.47
HMGN3-201ENST00000275036 KLHDC2Q9Y2U9 406 aa12.1□□□□□ -0.47
HMGN3-201ENST00000275036 TENM1Q9UKZ4 2725 aa12.09□□□□□ -0.47
HMGN3-201ENST00000275036 A0A0G2JMP0 313 aa12.09□□□□□ -0.47
HMGN3-201ENST00000275036 A0A0X1KG70 313 aa12.09□□□□□ -0.47
HMGN3-201ENST00000275036 GGT3PA6NGU5 568 aa12.09□□□□□ -0.47
HMGN3-201ENST00000275036 CEACAM18A8MTB9 384 aa12.09□□□□□ -0.47
HMGN3-201ENST00000275036 TRAPPC2LH3BP13 241 aa12.09□□□□□ -0.47
HMGN3-201ENST00000275036 IFNL4K9M1U5 179 aa12.09□□□□□ -0.47
HMGN3-201ENST00000275036 PRODHO43272 600 aa12.09□□□□□ -0.47
HMGN3-201ENST00000275036 MITFO75030 526 aaPredicted RBP12.09□□□□□ -0.47
HMGN3-201ENST00000275036 FSHBP01225 129 aa12.09□□□□□ -0.47
HMGN3-201ENST00000275036 SLC15A1P46059 708 aa12.09□□□□□ -0.47
HMGN3-201ENST00000275036 CRISP1P54107 249 aa12.09□□□□□ -0.47
HMGN3-201ENST00000275036 ATP6AP1Q15904 470 aa12.09□□□□□ -0.47
HMGN3-201ENST00000275036 ZNF181Q2M3W8 571 aa12.09□□□□□ -0.47
HMGN3-201ENST00000275036 KLHL12Q53G59 568 aa12.09□□□□□ -0.47
HMGN3-201ENST00000275036 DCAF12L2Q5VW00 463 aa12.09□□□□□ -0.47
HMGN3-201ENST00000275036 LIPNQ5VXI9 398 aa12.09□□□□□ -0.47
HMGN3-201ENST00000275036 SHFQ7M4L6 423 aa12.09□□□□□ -0.47
HMGN3-201ENST00000275036 C1QL2Q7Z5L3 287 aa12.09□□□□□ -0.47
HMGN3-201ENST00000275036 KLHL36Q8N4N3 616 aa12.09□□□□□ -0.47
HMGN3-201ENST00000275036 CELF2-AS1Q8N7Q2 184 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms