RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 ZNF823P16415 610 aa11.52□□□□□ -0.57
COL8A1-202ENST00000273342 GLRA1P23415 457 aa11.52□□□□□ -0.57
COL8A1-202ENST00000273342 CLDN6P56747 220 aa11.52□□□□□ -0.57
COL8A1-202ENST00000273342 ARMC6Q6NXE6 501 aa11.52□□□□□ -0.57
COL8A1-202ENST00000273342 PARM1Q6UWI2 310 aa11.52□□□□□ -0.57
COL8A1-202ENST00000273342 WDFY1Q8IWB7 410 aa11.52□□□□□ -0.57
COL8A1-202ENST00000273342 NPRL2Q8WTW4 380 aa11.52□□□□□ -0.57
COL8A1-202ENST00000273342 EMC6Q9BV81 110 aa11.52□□□□□ -0.57
COL8A1-202ENST00000273342 MED29Q9NX70 200 aa11.52□□□□□ -0.57
COL8A1-202ENST00000273342 IGKV1D-43A0A0B4J1Z2 117 aa11.52□□□□□ -0.57
COL8A1-202ENST00000273342 B4DGG1 531 aa11.52□□□□□ -0.57
COL8A1-202ENST00000273342 SSX5O60225 188 aa11.52□□□□□ -0.57
COL8A1-202ENST00000273342 ZNF205O95201 554 aa11.52□□□□□ -0.57
COL8A1-202ENST00000273342 TXNDC12O95881 172 aa11.52□□□□□ -0.57
COL8A1-202ENST00000273342 SCGB1D2O95969 90 aa11.52□□□□□ -0.57
COL8A1-202ENST00000273342 IL2RAP01589 272 aa11.52□□□□□ -0.57
COL8A1-202ENST00000273342 IGFBP3P17936 291 aaPredicted RBP11.52□□□□□ -0.57
COL8A1-202ENST00000273342 EMP2P54851 167 aa11.52□□□□□ -0.57
COL8A1-202ENST00000273342 RPL27P61353 136 aaKnown RBP11.52□□□□□ -0.57
COL8A1-202ENST00000273342 ANKRD55Q3KP44 614 aa11.52□□□□□ -0.57
COL8A1-202ENST00000273342 DEFB119Q8N690 84 aa11.52□□□□□ -0.57
COL8A1-202ENST00000273342 PNLDC1Q8NA58 520 aaKnown RBP11.52□□□□□ -0.57
COL8A1-202ENST00000273342 OR52N5Q8NH56 324 aa11.52□□□□□ -0.57
COL8A1-202ENST00000273342 NUDT22Q9BRQ3 303 aa11.52□□□□□ -0.57
COL8A1-202ENST00000273342 C5orf66Q9H5L9 145 aa11.52□□□□□ -0.57
COL8A1-202ENST00000273342 TAF9BQ9HBM6 251 aa11.52□□□□□ -0.57
COL8A1-202ENST00000273342 AMDHD2Q9Y303 409 aa11.52□□□□□ -0.57
COL8A1-202ENST00000273342 A0A1W2PPH5 198 aa11.51□□□□□ -0.57
COL8A1-202ENST00000273342 A6NCN8 305 aa11.51□□□□□ -0.57
COL8A1-202ENST00000273342 F8VVB4 439 aa11.51□□□□□ -0.57
COL8A1-202ENST00000273342 F8VWA3 439 aa11.51□□□□□ -0.57
COL8A1-202ENST00000273342 ZNF354AO60765 605 aaPredicted RBP11.51□□□□□ -0.57
COL8A1-202ENST00000273342 ZNF217O75362 1048 aa11.51□□□□□ -0.57
COL8A1-202ENST00000273342 MISPQ8IVT2 679 aa11.51□□□□□ -0.57
COL8A1-202ENST00000273342 TSLPQ969D9 159 aa11.51□□□□□ -0.57
COL8A1-202ENST00000273342 TCEAL3Q969E4 200 aa11.51□□□□□ -0.57
COL8A1-202ENST00000273342 SLC2A4RGQ9NR83 387 aa11.51□□□□□ -0.57
COL8A1-202ENST00000273342 TMEM100Q9NV29 134 aa11.51□□□□□ -0.57
COL8A1-202ENST00000273342 CLDN16Q9Y5I7 305 aa11.51□□□□□ -0.57
COL8A1-202ENST00000273342 PHYHO14832 338 aa11.51□□□□□ -0.57
COL8A1-202ENST00000273342 LINC01565O15544 149 aa11.51□□□□□ -0.57
COL8A1-202ENST00000273342 NME2P1O60361 137 aa11.51□□□□□ -0.57
COL8A1-202ENST00000273342 HOXB2P14652 356 aa11.51□□□□□ -0.57
COL8A1-202ENST00000273342 PTAFRP25105 342 aa11.51□□□□□ -0.57
COL8A1-202ENST00000273342 OR1D4P47884 311 aa11.51□□□□□ -0.57
COL8A1-202ENST00000273342 CAV2P51636 162 aa11.51□□□□□ -0.57
COL8A1-202ENST00000273342 SRSF4Q08170 494 aaKnown RBP11.51□□□□□ -0.57
COL8A1-202ENST00000273342 TMEM240Q5SV17 173 aa11.51□□□□□ -0.57
COL8A1-202ENST00000273342 NCMAPQ5T1S8 102 aa11.51□□□□□ -0.57
COL8A1-202ENST00000273342 Q6ZRG5 221 aa11.51□□□□□ -0.57
COL8A1-202ENST00000273342 Q6ZSR6 202 aa11.51□□□□□ -0.57
COL8A1-202ENST00000273342 PGAP1Q75T13 922 aa11.51□□□□□ -0.57
COL8A1-202ENST00000273342 HOXB13Q92826 284 aaPredicted RBP11.51□□□□□ -0.57
COL8A1-202ENST00000273342 FRYLO94915 3013 aa11.5□□□□□ -0.57
COL8A1-202ENST00000273342 ASXL3Q9C0F0 2248 aa11.5□□□□□ -0.57
COL8A1-202ENST00000273342 IGLV1-36A0A0B4J1U3 117 aa11.5□□□□□ -0.57
COL8A1-202ENST00000273342 LDLRAD4O15165 306 aa11.5□□□□□ -0.57
COL8A1-202ENST00000273342 H2BFMP0C1H6 154 aa11.5□□□□□ -0.57
COL8A1-202ENST00000273342 BCKDHBP21953 392 aa11.5□□□□□ -0.57
COL8A1-202ENST00000273342 FHITP49789 147 aa11.5□□□□□ -0.57
COL8A1-202ENST00000273342 GLO1Q04760 184 aa11.5□□□□□ -0.57
COL8A1-202ENST00000273342 ZNF616Q08AN1 781 aa11.5□□□□□ -0.57
COL8A1-202ENST00000273342 ARFRP1Q13795 201 aa11.5□□□□□ -0.57
COL8A1-202ENST00000273342 C16orf47Q6ZP98 133 aaPredicted RBP11.5□□□□□ -0.57
COL8A1-202ENST00000273342 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.5□□□□□ -0.57
COL8A1-202ENST00000273342 SLC26A10Q8NG04 563 aa11.5□□□□□ -0.57
COL8A1-202ENST00000273342 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.5□□□□□ -0.57
COL8A1-202ENST00000273342 ASB17Q8WXJ9 295 aa11.5□□□□□ -0.57
COL8A1-202ENST00000273342 HIST1H2BAQ96A08 127 aa11.5□□□□□ -0.57
COL8A1-202ENST00000273342 TMEM230Q96A57 120 aa11.5□□□□□ -0.57
COL8A1-202ENST00000273342 MAP3K3Q99759 626 aa11.5□□□□□ -0.57
COL8A1-202ENST00000273342 MYOZ1Q9NP98 299 aaPredicted RBP11.5□□□□□ -0.57
COL8A1-202ENST00000273342 RAB22AQ9UL26 194 aa11.5□□□□□ -0.57
COL8A1-202ENST00000273342 BGLAPP02818 100 aa11.5□□□□□ -0.57
COL8A1-202ENST00000273342 IFNA4P05014 189 aa11.5□□□□□ -0.57
COL8A1-202ENST00000273342 EMC4Q5J8M3 183 aa11.5□□□□□ -0.57
COL8A1-202ENST00000273342 C10orf91Q5T1B1 145 aa11.5□□□□□ -0.57
COL8A1-202ENST00000273342 MAMDC2Q7Z304 686 aaPredicted RBP11.5□□□□□ -0.57
COL8A1-202ENST00000273342 FAM24BQ8N5W8 94 aa11.5□□□□□ -0.57
COL8A1-202ENST00000273342 ZDHHC22Q8N966 263 aa11.5□□□□□ -0.57
COL8A1-202ENST00000273342 TERB2Q8NHR7 220 aa11.5□□□□□ -0.57
COL8A1-202ENST00000273342 KIRREL1Q96J84 757 aa11.5□□□□□ -0.57
COL8A1-202ENST00000273342 PDE7BQ9NP56 450 aa11.5□□□□□ -0.57
COL8A1-202ENST00000273342 G6PC2Q9NQR9 355 aa11.5□□□□□ -0.57
COL8A1-202ENST00000273342 PLA2G2EQ9NZK7 142 aa11.5□□□□□ -0.57
COL8A1-202ENST00000273342 SYT7O43581 403 aa11.49□□□□□ -0.57
COL8A1-202ENST00000273342 FCARP24071 287 aa11.49□□□□□ -0.57
COL8A1-202ENST00000273342 HHEXQ03014 270 aa11.49□□□□□ -0.57
COL8A1-202ENST00000273342 TMEM128Q5BJH2 165 aa11.49□□□□□ -0.57
COL8A1-202ENST00000273342 OR13H1Q8NG92 308 aa11.49□□□□□ -0.57
COL8A1-202ENST00000273342 OR6S1Q8NH40 331 aa11.49□□□□□ -0.57
COL8A1-202ENST00000273342 SCARF2Q96GP6 870 aaPredicted RBP11.49□□□□□ -0.57
COL8A1-202ENST00000273342 SMCO4Q9NRQ5 59 aa11.49□□□□□ -0.57
COL8A1-202ENST00000273342 R4GMQ9 66 aa11.49□□□□□ -0.57
COL8A1-202ENST00000273342 NUP210LQ5VU65 1888 aa11.49□□□□□ -0.57
COL8A1-202ENST00000273342 C1QL1O75973 258 aa11.49□□□□□ -0.57
COL8A1-202ENST00000273342 KLF8O95600 359 aaPredicted RBP11.49□□□□□ -0.57
COL8A1-202ENST00000273342 ANOS1P23352 680 aa11.49□□□□□ -0.57
COL8A1-202ENST00000273342 ITGA3P26006 1051 aa11.49□□□□□ -0.57
COL8A1-202ENST00000273342 CEBPGP53567 150 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms