RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 NKAIN3Q8N8D7 197 aa13.49□□□□□ -0.25
SF3B4-201ENST00000271628 ZFP62Q8NB50 900 aaPredicted RBP13.49□□□□□ -0.25
SF3B4-201ENST00000271628 CPT1CQ8TCG5 803 aa13.49□□□□□ -0.25
SF3B4-201ENST00000271628 ZNF775Q96BV0 537 aaPredicted RBP13.49□□□□□ -0.25
SF3B4-201ENST00000271628 HRASLSQ9HDD0 168 aa13.49□□□□□ -0.25
SF3B4-201ENST00000271628 TAS2R4Q9NYW5 299 aa13.49□□□□□ -0.25
SF3B4-201ENST00000271628 MED13Q9UHV7 2174 aa13.49□□□□□ -0.25
SF3B4-201ENST00000271628 FAM166BA8MTA8 275 aa13.49□□□□□ -0.25
SF3B4-201ENST00000271628 ITGA5P08648 1049 aa13.49□□□□□ -0.25
SF3B4-201ENST00000271628 ZNF708P17019 499 aa13.49□□□□□ -0.25
SF3B4-201ENST00000271628 MNDAP41218 407 aa13.49□□□□□ -0.25
SF3B4-201ENST00000271628 CAPZA1P52907 286 aa13.49□□□□□ -0.25
SF3B4-201ENST00000271628 HIST1H3AP68431 136 aa13.49□□□□□ -0.25
SF3B4-201ENST00000271628 ARG2P78540 354 aa13.49□□□□□ -0.25
SF3B4-201ENST00000271628 ENDOGQ14249 297 aaKnown RBP13.49□□□□□ -0.25
SF3B4-201ENST00000271628 RAB11BQ15907 218 aa13.49□□□□□ -0.25
SF3B4-201ENST00000271628 HIST2H3PS2Q5TEC6 136 aa13.49□□□□□ -0.25
SF3B4-201ENST00000271628 METTL11BQ5VVY1 283 aa13.49□□□□□ -0.25
SF3B4-201ENST00000271628 HIST2H3AQ71DI3 136 aa13.49□□□□□ -0.25
SF3B4-201ENST00000271628 TMPRSS7Q7RTY8 843 aa13.49□□□□□ -0.25
SF3B4-201ENST00000271628 IZUMO1Q8IYV9 350 aa13.49□□□□□ -0.25
SF3B4-201ENST00000271628 TMEM178AQ8NBL3 297 aa13.49□□□□□ -0.25
SF3B4-201ENST00000271628 ZNF680Q8NEM1 530 aa13.49□□□□□ -0.25
SF3B4-201ENST00000271628 OR11H4Q8NGC9 324 aa13.49□□□□□ -0.25
SF3B4-201ENST00000271628 DACT3Q96B18 629 aaPredicted RBP13.49□□□□□ -0.25
SF3B4-201ENST00000271628 ACKR4Q9NPB9 350 aa13.49□□□□□ -0.25
SF3B4-201ENST00000271628 DLL4Q9NR61 685 aa13.49□□□□□ -0.25
SF3B4-201ENST00000271628 SLC22A5O76082 557 aa13.48□□□□□ -0.25
SF3B4-201ENST00000271628 ADRB1P08588 477 aa13.48□□□□□ -0.25
SF3B4-201ENST00000271628 DNASE1P24855 282 aa13.48□□□□□ -0.25
SF3B4-201ENST00000271628 CX3CR1P49238 355 aa13.48□□□□□ -0.25
SF3B4-201ENST00000271628 CLDN18P56856 261 aa13.48□□□□□ -0.25
SF3B4-201ENST00000271628 ZNF121P58317 390 aaPredicted RBP13.48□□□□□ -0.25
SF3B4-201ENST00000271628 PPIAP62937 165 aaKnown RBP13.48□□□□□ -0.25
SF3B4-201ENST00000271628 SLC10A1Q14973 349 aa13.48□□□□□ -0.25
SF3B4-201ENST00000271628 TMEM69Q5SWH9 247 aa13.48□□□□□ -0.25
SF3B4-201ENST00000271628 FAM166AQ6J272 317 aa13.48□□□□□ -0.25
SF3B4-201ENST00000271628 LRRC18Q8N456 261 aa13.48□□□□□ -0.25
SF3B4-201ENST00000271628 ZNF283Q8N7M2 679 aa13.48□□□□□ -0.25
SF3B4-201ENST00000271628 PLPP7Q8NBV4 271 aa13.48□□□□□ -0.25
SF3B4-201ENST00000271628 OR5D14Q8NGL3 314 aa13.48□□□□□ -0.25
SF3B4-201ENST00000271628 OR6M1Q8NGM8 313 aa13.48□□□□□ -0.25
SF3B4-201ENST00000271628 OR52I2Q8NH67 350 aa13.48□□□□□ -0.25
SF3B4-201ENST00000271628 TMEM45BQ96B21 275 aa13.48□□□□□ -0.25
SF3B4-201ENST00000271628 ZNF845Q96IR2 970 aaPredicted RBP13.48□□□□□ -0.25
SF3B4-201ENST00000271628 SORCS2Q96PQ0 1159 aa13.48□□□□□ -0.25
SF3B4-201ENST00000271628 ZNF552Q9H707 407 aaPredicted RBP13.48□□□□□ -0.25
SF3B4-201ENST00000271628 CRLF2Q9HC73 371 aa13.48□□□□□ -0.25
SF3B4-201ENST00000271628 SLC17A5Q9NRA2 495 aa13.48□□□□□ -0.25
SF3B4-201ENST00000271628 IGKV3D-15A0A087WSY6 115 aa13.48□□□□□ -0.25
SF3B4-201ENST00000271628 LINC00862A6NCI5 91 aa13.48□□□□□ -0.25
SF3B4-201ENST00000271628 ACOT7O00154 380 aa13.48□□□□□ -0.25
SF3B4-201ENST00000271628 DOK2O60496 412 aa13.48□□□□□ -0.25
SF3B4-201ENST00000271628 SYNGR4O95473 234 aa13.48□□□□□ -0.25
SF3B4-201ENST00000271628 ACTL6AO96019 429 aa13.48□□□□□ -0.25
SF3B4-201ENST00000271628 CELA3AP09093 270 aa13.48□□□□□ -0.25
SF3B4-201ENST00000271628 HTR2CP28335 458 aa13.48□□□□□ -0.25
SF3B4-201ENST00000271628 PTH2RP49190 550 aa13.48□□□□□ -0.25
SF3B4-201ENST00000271628 PIAS4Q8N2W9 510 aaPredicted RBP13.48□□□□□ -0.25
SF3B4-201ENST00000271628 BEST4Q8NFU0 473 aa13.48□□□□□ -0.25
SF3B4-201ENST00000271628 OR51D1Q8NGF3 324 aa13.48□□□□□ -0.25
SF3B4-201ENST00000271628 MARVELD3Q96A59 401 aa13.48□□□□□ -0.25
SF3B4-201ENST00000271628 FAM3DQ96BQ1 224 aa13.48□□□□□ -0.25
SF3B4-201ENST00000271628 FGGYQ96C11 551 aa13.48□□□□□ -0.25
SF3B4-201ENST00000271628 MED30Q96HR3 178 aa13.48□□□□□ -0.25
SF3B4-201ENST00000271628 ZNF436Q9C0F3 470 aaPredicted RBP13.48□□□□□ -0.25
SF3B4-201ENST00000271628 PARPBPQ9NWS1 579 aa13.48□□□□□ -0.25
SF3B4-201ENST00000271628 MCTS1Q9ULC4 181 aaKnown RBP13.48□□□□□ -0.25
SF3B4-201ENST00000271628 LOC100289279A0A1B0GTE1 492 aa13.47□□□□□ -0.25
SF3B4-201ENST00000271628 A0A1B0GUH1 482 aa13.47□□□□□ -0.25
SF3B4-201ENST00000271628 ANKRD20A5PA0PJZ0 165 aa13.47□□□□□ -0.25
SF3B4-201ENST00000271628 GMDSO60547 372 aa13.47□□□□□ -0.25
SF3B4-201ENST00000271628 SNAPC5O75971 98 aa13.47□□□□□ -0.25
SF3B4-201ENST00000271628 NTF4P34130 210 aa13.47□□□□□ -0.25
SF3B4-201ENST00000271628 POU3F4P49335 361 aa13.47□□□□□ -0.25
SF3B4-201ENST00000271628 C2orf76Q3KRA6 126 aa13.47□□□□□ -0.25
SF3B4-201ENST00000271628 ZNF766Q5HY98 468 aa13.47□□□□□ -0.25
SF3B4-201ENST00000271628 SFRP4Q6FHJ7 346 aaPredicted RBP13.47□□□□□ -0.25
SF3B4-201ENST00000271628 MTFR2Q6P444 385 aa13.47□□□□□ -0.25
SF3B4-201ENST00000271628 SEZ6L2Q6UXD5 910 aa13.47□□□□□ -0.25
SF3B4-201ENST00000271628 VASH2Q86V25 355 aa13.47□□□□□ -0.25
SF3B4-201ENST00000271628 OR51E1Q8TCB6 317 aa13.47□□□□□ -0.25
SF3B4-201ENST00000271628 LRFN3Q9BTN0 628 aa13.47□□□□□ -0.25
SF3B4-201ENST00000271628 CLEC4MQ9H2X3 399 aaPredicted RBP13.47□□□□□ -0.25
SF3B4-201ENST00000271628 HEXA-AS1Q9H8Q6 139 aa13.47□□□□□ -0.25
SF3B4-201ENST00000271628 SLC5A6Q9Y289 635 aa13.47□□□□□ -0.25
SF3B4-201ENST00000271628 PTPRBP23467 1997 aa13.47□□□□□ -0.25
SF3B4-201ENST00000271628 LOC390937A0A1W2PQ73 354 aa13.46□□□□□ -0.25
SF3B4-201ENST00000271628 LEUTXA8MZ59 168 aa13.46□□□□□ -0.25
SF3B4-201ENST00000271628 TM4SF5O14894 197 aa13.46□□□□□ -0.25
SF3B4-201ENST00000271628 NKX2-8O15522 239 aa13.46□□□□□ -0.25
SF3B4-201ENST00000271628 CST2P09228 141 aa13.46□□□□□ -0.25
SF3B4-201ENST00000271628 CDK2P24941 298 aa13.46□□□□□ -0.25
SF3B4-201ENST00000271628 GNALP38405 381 aa13.46□□□□□ -0.25
SF3B4-201ENST00000271628 SRYQ05066 204 aa13.46□□□□□ -0.25
SF3B4-201ENST00000271628 LGALSLQ3ZCW2 172 aaPredicted RBP13.46□□□□□ -0.25
SF3B4-201ENST00000271628 OLFML2AQ68BL7 652 aa13.46□□□□□ -0.25
SF3B4-201ENST00000271628 ANKRD16Q6P6B7 361 aa13.46□□□□□ -0.25
SF3B4-201ENST00000271628 ABHD12BQ7Z5M8 362 aaPredicted RBP13.46□□□□□ -0.25
SF3B4-201ENST00000271628 OR8B12Q8NGG6 310 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms