RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 HIST1H3AP68431 136 aa21.46■■□□□ 1.03
SSBP4-201ENST00000270061 ENDOGQ14249 297 aaKnown RBP21.46■■□□□ 1.03
SSBP4-201ENST00000270061 CEP78Q5JTW2 689 aa21.46■■□□□ 1.03
SSBP4-201ENST00000270061 HIST2H3PS2Q5TEC6 136 aa21.46■■□□□ 1.03
SSBP4-201ENST00000270061 FAM27BQ5VT28 67 aa21.46■■□□□ 1.03
SSBP4-201ENST00000270061 HIST2H3AQ71DI3 136 aa21.46■■□□□ 1.03
SSBP4-201ENST00000270061 PARP16Q8N5Y8 322 aa21.46■■□□□ 1.03
SSBP4-201ENST00000270061 LINC00470Q9BZP3 86 aa21.46■■□□□ 1.03
SSBP4-201ENST00000270061 MIXL1Q9H2W2 232 aa21.46■■□□□ 1.03
SSBP4-201ENST00000270061 ABCB9Q9NP78 766 aa21.46■■□□□ 1.03
SSBP4-201ENST00000270061 PNRC2Q9NPJ4 139 aaKnown RBP21.46■■□□□ 1.03
SSBP4-201ENST00000270061 OR52A1Q9UKL2 312 aa21.46■■□□□ 1.03
SSBP4-201ENST00000270061 SLC22A13Q9Y226 551 aa21.46■■□□□ 1.03
SSBP4-201ENST00000270061 NOSIPQ9Y314 301 aaKnown RBP21.46■■□□□ 1.03
SSBP4-201ENST00000270061 TMEM269A0A1B0GVZ9 245 aa21.45■■□□□ 1.02
SSBP4-201ENST00000270061 ANKRD61A6NGH8 418 aa21.45■■□□□ 1.02
SSBP4-201ENST00000270061 ACOD1A6NK06 481 aa21.45■■□□□ 1.02
SSBP4-201ENST00000270061 ISG15P05161 165 aa21.45■■□□□ 1.02
SSBP4-201ENST00000270061 SFXN4Q6P4A7 337 aa21.45■■□□□ 1.02
SSBP4-201ENST00000270061 KLHL24Q6TFL4 600 aa21.45■■□□□ 1.02
SSBP4-201ENST00000270061 LAX1Q8IWV1 398 aa21.45■■□□□ 1.02
SSBP4-201ENST00000270061 ITGB1BP2Q9UKP3 347 aa21.45■■□□□ 1.02
SSBP4-201ENST00000270061 MAP1AP78559 2803 aaPredicted RBP21.45■■□□□ 1.02
SSBP4-201ENST00000270061 NOTOA8MTQ0 251 aa21.44■■□□□ 1.02
SSBP4-201ENST00000270061 TMEM127O75204 238 aa21.44■■□□□ 1.02
SSBP4-201ENST00000270061 PPP3R1P63098 170 aa21.44■■□□□ 1.02
SSBP4-201ENST00000270061 STK11Q15831 433 aa21.44■■□□□ 1.02
SSBP4-201ENST00000270061 ZNF704Q6ZNC4 412 aaPredicted RBP21.44■■□□□ 1.02
SSBP4-201ENST00000270061 RDH10Q8IZV5 341 aa21.44■■□□□ 1.02
SSBP4-201ENST00000270061 GJC3Q8NFK1 279 aa21.44■■□□□ 1.02
SSBP4-201ENST00000270061 C12orf49Q9H741 205 aa21.44■■□□□ 1.02
SSBP4-201ENST00000270061 CRLF2Q9HC73 371 aa21.44■■□□□ 1.02
SSBP4-201ENST00000270061 GP6Q9HCN6 339 aa21.44■■□□□ 1.02
SSBP4-201ENST00000270061 FAM206AQ9NX38 181 aa21.44■■□□□ 1.02
SSBP4-201ENST00000270061 OR6C65A6NJZ3 312 aa21.43■■□□□ 1.02
SSBP4-201ENST00000270061 C16orf97H3BN30 126 aa21.43■■□□□ 1.02
SSBP4-201ENST00000270061 PDCD5O14737 125 aa21.43■■□□□ 1.02
SSBP4-201ENST00000270061 MRPL33O75394 65 aaKnown RBP21.43■■□□□ 1.02
SSBP4-201ENST00000270061 GOSR1O95249 250 aa21.43■■□□□ 1.02
SSBP4-201ENST00000270061 NRGNQ92686 78 aa21.43■■□□□ 1.02
SSBP4-201ENST00000270061 ZNF837Q96EG3 531 aaPredicted RBP21.43■■□□□ 1.02
SSBP4-201ENST00000270061 DDX28Q9NUL7 540 aaKnown RBP21.43■■□□□ 1.02
SSBP4-201ENST00000270061 RER1O15258 196 aa21.43■■□□□ 1.02
SSBP4-201ENST00000270061 THBS2P35442 1172 aa21.43■■□□□ 1.02
SSBP4-201ENST00000270061 MAGEB1P43366 347 aa21.43■■□□□ 1.02
SSBP4-201ENST00000270061 OR10A3P58181 314 aa21.43■■□□□ 1.02
SSBP4-201ENST00000270061 TUSC5Q8IXB3 177 aa21.43■■□□□ 1.02
SSBP4-201ENST00000270061 OR10AC1Q8NH08 325 aa21.43■■□□□ 1.02
SSBP4-201ENST00000270061 HTRA1Q92743 480 aa21.43■■□□□ 1.02
SSBP4-201ENST00000270061 PPP1R14AQ96A00 147 aa21.43■■□□□ 1.02
SSBP4-201ENST00000270061 GPR35Q9HC97 309 aa21.43■■□□□ 1.02
SSBP4-201ENST00000270061 TMEM38BQ9NVV0 291 aa21.43■■□□□ 1.02
SSBP4-201ENST00000270061 GTF2A1LQ9UNN4 478 aa21.43■■□□□ 1.02
SSBP4-201ENST00000270061 PRR14LQ5THK1 2151 aa21.42■■□□□ 1.02
SSBP4-201ENST00000270061 YES1P07947 543 aa21.42■■□□□ 1.02
SSBP4-201ENST00000270061 APEX1P27695 318 aaKnown RBP21.42■■□□□ 1.02
SSBP4-201ENST00000270061 CCKARP32238 428 aa21.42■■□□□ 1.02
SSBP4-201ENST00000270061 GRB2P62993 217 aaKnown RBP21.42■■□□□ 1.02
SSBP4-201ENST00000270061 IDNKQ5T6J7 187 aa21.42■■□□□ 1.02
SSBP4-201ENST00000270061 TMEM244Q5VVB8 128 aa21.42■■□□□ 1.02
SSBP4-201ENST00000270061 BEND4Q6ZU67 534 aa21.42■■□□□ 1.02
SSBP4-201ENST00000270061 WFIKKN1Q96NZ8 548 aa21.42■■□□□ 1.02
SSBP4-201ENST00000270061 SLITRK2Q9H156 845 aa21.42■■□□□ 1.02
SSBP4-201ENST00000270061 SLCO5A1Q9H2Y9 848 aa21.42■■□□□ 1.02
SSBP4-201ENST00000270061 MOB1AQ9H8S9 216 aa21.42■■□□□ 1.02
SSBP4-201ENST00000270061 COMMD3Q9UBI1 195 aa21.42■■□□□ 1.02
SSBP4-201ENST00000270061 CST2P09228 141 aa21.41■■□□□ 1.02
SSBP4-201ENST00000270061 UBCP0CG48 685 aaKnown RBP21.41■■□□□ 1.02
SSBP4-201ENST00000270061 ACHEP22303 614 aa21.41■■□□□ 1.02
SSBP4-201ENST00000270061 PSMA6P60900 246 aaKnown RBP21.41■■□□□ 1.02
SSBP4-201ENST00000270061 NRN1LQ496H8 165 aa21.41■■□□□ 1.02
SSBP4-201ENST00000270061 LINGO2Q7L985 606 aa21.41■■□□□ 1.02
SSBP4-201ENST00000270061 OR51A4Q8NGJ6 313 aa21.41■■□□□ 1.02
SSBP4-201ENST00000270061 TMEM106AQ96A25 262 aa21.41■■□□□ 1.02
SSBP4-201ENST00000270061 SOX2P48431 317 aa21.41■■□□□ 1.02
SSBP4-201ENST00000270061 TAF13Q15543 124 aa21.41■■□□□ 1.02
SSBP4-201ENST00000270061 ODF4Q2M2E3 257 aa21.41■■□□□ 1.02
SSBP4-201ENST00000270061 BCL2L15Q5TBC7 163 aa21.41■■□□□ 1.02
SSBP4-201ENST00000270061 STAC2Q6ZMT1 411 aa21.41■■□□□ 1.02
SSBP4-201ENST00000270061 ELMOD2Q8IZ81 293 aa21.41■■□□□ 1.02
SSBP4-201ENST00000270061 TCF7L1Q9HCS4 588 aa21.41■■□□□ 1.02
SSBP4-201ENST00000270061 HHLA2Q9UM44 414 aa21.41■■□□□ 1.02
SSBP4-201ENST00000270061 V9GYH0 126 aa21.41■■□□□ 1.02
SSBP4-201ENST00000270061 RPL36A-HNRNPH2H7BZ11 118 aa21.4■■□□□ 1.02
SSBP4-201ENST00000270061 HSD11B1P28845 292 aa21.4■■□□□ 1.02
SSBP4-201ENST00000270061 ALKBH3Q96Q83 286 aaPredicted RBP21.4■■□□□ 1.02
SSBP4-201ENST00000270061 FOXB1Q99853 325 aa21.4■■□□□ 1.02
SSBP4-201ENST00000270061 WACQ9BTA9 647 aa21.4■■□□□ 1.02
SSBP4-201ENST00000270061 ABRACLQ9P1F3 81 aa21.4■■□□□ 1.02
SSBP4-201ENST00000270061 NUFIP1Q9UHK0 495 aaKnown RBP21.4■■□□□ 1.02
SSBP4-201ENST00000270061 DAPK2Q9UIK4 370 aa21.4■■□□□ 1.02
SSBP4-201ENST00000270061 ADAM30Q9UKF2 790 aa21.4■■□□□ 1.02
SSBP4-201ENST00000270061 AK6Q9Y3D8 172 aaKnown RBP21.4■■□□□ 1.02
SSBP4-201ENST00000270061 CEACAM16Q2WEN9 425 aa21.39■■□□□ 1.01
SSBP4-201ENST00000270061 TSPO2Q5TGU0 170 aa21.39■■□□□ 1.01
SSBP4-201ENST00000270061 NUFIP2Q7Z417 695 aaKnown RBP21.39■■□□□ 1.01
SSBP4-201ENST00000270061 SYT9Q86SS6 491 aa21.39■■□□□ 1.01
SSBP4-201ENST00000270061 TSEN15Q8WW01 171 aaKnown RBP21.39■■□□□ 1.01
SSBP4-201ENST00000270061 PBOV1Q9GZY1 135 aa21.39■■□□□ 1.01
SSBP4-201ENST00000270061 DHDHQ9UQ10 334 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms