RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 GLT8D1Q68CQ7 371 aa14.27□□□□□ -0.12
TPM1-201ENST00000267996 GCNT2Q8N0V5 402 aa14.27□□□□□ -0.12
TPM1-201ENST00000267996 Q8NA96 180 aa14.27□□□□□ -0.12
TPM1-201ENST00000267996 CPEB3Q8NE35 698 aaKnown RBP14.27□□□□□ -0.12
TPM1-201ENST00000267996 OR51A2Q8NGJ7 313 aa14.27□□□□□ -0.12
TPM1-201ENST00000267996 OR6K3Q8NGY3 331 aa14.27□□□□□ -0.12
TPM1-201ENST00000267996 MBD3L2Q8NHZ7 208 aaPredicted RBP14.27□□□□□ -0.12
TPM1-201ENST00000267996 OR10A2Q9H208 303 aa14.27□□□□□ -0.12
TPM1-201ENST00000267996 SP140LQ9H930 580 aa14.27□□□□□ -0.12
TPM1-201ENST00000267996 ETV7Q9Y603 341 aa14.27□□□□□ -0.12
TPM1-201ENST00000267996 V9GYS6 101 aa14.27□□□□□ -0.12
TPM1-201ENST00000267996 ZNF503-AS2A6NEH8 195 aa14.26□□□□□ -0.13
TPM1-201ENST00000267996 GABRA1P14867 456 aa14.26□□□□□ -0.13
TPM1-201ENST00000267996 PTGER4P35408 488 aa14.26□□□□□ -0.13
TPM1-201ENST00000267996 ARR3P36575 388 aa14.26□□□□□ -0.13
TPM1-201ENST00000267996 CLDN12P56749 244 aa14.26□□□□□ -0.13
TPM1-201ENST00000267996 BAK1Q16611 211 aa14.26□□□□□ -0.13
TPM1-201ENST00000267996 SNAI3Q3KNW1 292 aa14.26□□□□□ -0.13
TPM1-201ENST00000267996 UBE2NLQ5JXB2 153 aa14.26□□□□□ -0.13
TPM1-201ENST00000267996 ZNF585AQ6P3V2 769 aa14.26□□□□□ -0.13
TPM1-201ENST00000267996 FAM180AQ6UWF9 173 aa14.26□□□□□ -0.13
TPM1-201ENST00000267996 Q6ZNX1 250 aa14.26□□□□□ -0.13
TPM1-201ENST00000267996 SEM1Q6ZVN7 128 aa14.26□□□□□ -0.13
TPM1-201ENST00000267996 NKAIN3Q8N8D7 197 aa14.26□□□□□ -0.13
TPM1-201ENST00000267996 OR5D14Q8NGL3 314 aa14.26□□□□□ -0.13
TPM1-201ENST00000267996 SLC25A28Q96A46 364 aa14.26□□□□□ -0.13
TPM1-201ENST00000267996 SGK3Q96BR1 496 aa14.26□□□□□ -0.13
TPM1-201ENST00000267996 FAM71F1Q96KD3 344 aaPredicted RBP14.26□□□□□ -0.13
TPM1-201ENST00000267996 RHBDD3Q9Y3P4 386 aa14.26□□□□□ -0.13
TPM1-201ENST00000267996 WDR1O75083 606 aa14.26□□□□□ -0.13
TPM1-201ENST00000267996 HLA-HP01893 362 aa14.26□□□□□ -0.13
TPM1-201ENST00000267996 AZGP1P25311 298 aaKnown RBP14.26□□□□□ -0.13
TPM1-201ENST00000267996 TALDO1P37837 337 aa14.26□□□□□ -0.13
TPM1-201ENST00000267996 OXA1LQ15070 435 aa14.26□□□□□ -0.13
TPM1-201ENST00000267996 PYDC2Q56P42 97 aa14.26□□□□□ -0.13
TPM1-201ENST00000267996 C1orf100Q5SVJ3 147 aa14.26□□□□□ -0.13
TPM1-201ENST00000267996 RTL6Q6ICC9 239 aa14.26□□□□□ -0.13
TPM1-201ENST00000267996 DCDC5Q6ZRR9 648 aa14.26□□□□□ -0.13
TPM1-201ENST00000267996 COMMD2Q86X83 199 aa14.26□□□□□ -0.13
TPM1-201ENST00000267996 OR8H2Q8N162 312 aa14.26□□□□□ -0.13
TPM1-201ENST00000267996 CENPSQ8N2Z9 138 aa14.26□□□□□ -0.13
TPM1-201ENST00000267996 OR1M1Q8NGA1 313 aa14.26□□□□□ -0.13
TPM1-201ENST00000267996 SLC25A38Q96DW6 304 aa14.26□□□□□ -0.13
TPM1-201ENST00000267996 ABCG5Q9H222 651 aa14.26□□□□□ -0.13
TPM1-201ENST00000267996 RNF121Q9H920 327 aa14.26□□□□□ -0.13
TPM1-201ENST00000267996 NOX3Q9HBY0 568 aa14.26□□□□□ -0.13
TPM1-201ENST00000267996 C14orf119Q9NWQ9 140 aa14.26□□□□□ -0.13
TPM1-201ENST00000267996 B3GNT2Q9NY97 397 aa14.26□□□□□ -0.13
TPM1-201ENST00000267996 DHRS3O75911 302 aa14.25□□□□□ -0.13
TPM1-201ENST00000267996 CSF3P09919 207 aa14.25□□□□□ -0.13
TPM1-201ENST00000267996 IL7P13232 177 aa14.25□□□□□ -0.13
TPM1-201ENST00000267996 ZNF20P17024 532 aa14.25□□□□□ -0.13
TPM1-201ENST00000267996 BDKRB2P30411 391 aa14.25□□□□□ -0.13
TPM1-201ENST00000267996 ID4P47928 161 aa14.25□□□□□ -0.13
TPM1-201ENST00000267996 SPOCK1Q08629 439 aa14.25□□□□□ -0.13
TPM1-201ENST00000267996 IL18Q14116 193 aa14.25□□□□□ -0.13
TPM1-201ENST00000267996 RAB11BQ15907 218 aa14.25□□□□□ -0.13
TPM1-201ENST00000267996 COLCA1Q6ZS62 124 aa14.25□□□□□ -0.13
TPM1-201ENST00000267996 Q6ZT83 130 aa14.25□□□□□ -0.13
TPM1-201ENST00000267996 PGAP1Q75T13 922 aa14.25□□□□□ -0.13
TPM1-201ENST00000267996 CMTM4Q8IZR5 234 aa14.25□□□□□ -0.13
TPM1-201ENST00000267996 FOXRED1Q96CU9 486 aaPredicted RBP14.25□□□□□ -0.13
TPM1-201ENST00000267996 C10orf35Q96D05 121 aa14.25□□□□□ -0.13
TPM1-201ENST00000267996 BOD1Q96IK1 185 aa14.25□□□□□ -0.13
TPM1-201ENST00000267996 TMEM138Q9NPI0 162 aa14.25□□□□□ -0.13
TPM1-201ENST00000267996 ZNF391Q9UJN7 358 aa14.25□□□□□ -0.13
TPM1-201ENST00000267996 A0A0G2JMP0 313 aa14.24□□□□□ -0.13
TPM1-201ENST00000267996 A0A0X1KG70 313 aa14.24□□□□□ -0.13
TPM1-201ENST00000267996 DHRS7CA6NNS2 312 aa14.24□□□□□ -0.13
TPM1-201ENST00000267996 UBL3O95164 117 aa14.24□□□□□ -0.13
TPM1-201ENST00000267996 CRHP06850 196 aa14.24□□□□□ -0.13
TPM1-201ENST00000267996 ABOP16442 354 aa14.24□□□□□ -0.13
TPM1-201ENST00000267996 IGHV1-2P23083 117 aa14.24□□□□□ -0.13
TPM1-201ENST00000267996 GNALP38405 381 aa14.24□□□□□ -0.13
TPM1-201ENST00000267996 NR4A2P43354 598 aa14.24□□□□□ -0.13
TPM1-201ENST00000267996 PITPNBP48739 271 aa14.24□□□□□ -0.13
TPM1-201ENST00000267996 TDGF1P3P51864 188 aa14.24□□□□□ -0.13
TPM1-201ENST00000267996 GFOD2Q3B7J2 385 aa14.24□□□□□ -0.13
TPM1-201ENST00000267996 LINC00303Q3SY05 128 aa14.24□□□□□ -0.13
TPM1-201ENST00000267996 TMEM53Q6P2H8 277 aa14.24□□□□□ -0.13
TPM1-201ENST00000267996 MINDY2Q8NBR6 621 aa14.24□□□□□ -0.13
TPM1-201ENST00000267996 OR4M2Q8NGB6 313 aa14.24□□□□□ -0.13
TPM1-201ENST00000267996 OR6M1Q8NGM8 313 aa14.24□□□□□ -0.13
TPM1-201ENST00000267996 RAB40AQ8WXH6 277 aa14.24□□□□□ -0.13
TPM1-201ENST00000267996 C1QTNF5Q9BXJ0 243 aa14.24□□□□□ -0.13
TPM1-201ENST00000267996 ZNF71Q9NQZ8 489 aaPredicted RBP14.24□□□□□ -0.13
TPM1-201ENST00000267996 PLSCR4Q9NRQ2 329 aa14.24□□□□□ -0.13
TPM1-201ENST00000267996 TUBD1Q9UJT1 453 aa14.24□□□□□ -0.13
TPM1-201ENST00000267996 LOC100509620A0A075B734 347 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 A6NIN4 97 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 MTRF1O75570 445 aaKnown RBP14.23□□□□□ -0.13
TPM1-201ENST00000267996 TNFSF13O75888 250 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 ALX3O95076 343 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 HLA-DQB1P01920 261 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 LCATP04180 440 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 CD79AP11912 226 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 RAB3AP20336 220 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 COX5AP20674 150 aa14.23□□□□□ -0.13
TPM1-201ENST00000267996 HOXD11P31277 338 aaPredicted RBP14.23□□□□□ -0.13
TPM1-201ENST00000267996 THBS4P35443 961 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms