RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 TGIF2Q9GZN2 237 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 URGCP-MRPS24S4R325 110 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 UMAD1C9J7I0 102 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 RNASEK-C17orf49H0YIS7 233 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 NME2P1O60361 137 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 PMS2CLQ68D20 193 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 RGS7BPQ6MZT1 257 aaPredicted RBP10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 DCXRQ7Z4W1 244 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 LINC00518Q8N0U6 118 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 DDIT4LQ96D03 193 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 NELFAQ9H3P2 528 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 C1orf198Q9H425 327 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 ZNF275Q9NSD4 429 aaPredicted RBP10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 FBXO7Q9Y3I1 522 aa10.39□□□□□ -0.75
CLSTN3-201ENST00000266546 A0A1B0GTQ1 180 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 PLSCR5A0PG75 271 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 OR6C68A6NDL8 312 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 OR2W5A6NFC9 320 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 IFI6P09912 130 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 NQO2P16083 231 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 PNLIPP16233 465 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 ZNF43P17038 809 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 ALOX5APP20292 161 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 EMC4Q5J8M3 183 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 NHLRC3Q5JS37 347 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 HAS2Q92819 552 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 NKX3-1Q99801 234 aaPredicted RBP10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 ZNF160Q9HCG1 818 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 MMP26Q9NRE1 261 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 SLC22A11Q9NSA0 550 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 SLCO1C1Q9NYB5 712 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 PILRAQ9UKJ1 303 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 ZNF346Q9UL40 294 aaKnown RBP10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 ARPC3O15145 178 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 SCRG1O75711 98 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 OR2C1O95371 312 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 TAGLN2P37802 199 aaKnown RBP10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 DCDP81605 110 aaKnown RBP10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 SLC17A1Q14916 467 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 ELAVL1Q15717 326 aaKnown RBP10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 OPN5Q6U736 354 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 GLIPR1L1Q6UWM5 242 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 MARCH3Q86UD3 253 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 RCBTB1Q8NDN9 531 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 OR5M8Q8NGP6 311 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 SFT2D1Q8WV19 159 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 NIPSNAP3BQ9BS92 247 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 FAM96BQ9Y3D0 163 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 PCDHGA9Q9Y5G4 932 aaKnown RBP10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 PCDHGA5Q9Y5G8 931 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 C2orf16Q68DN1 1984 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 UNC13CQ8NB66 2214 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 HSPB2A8KAH6 182 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 H7C1Q1 480 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 PRKNO60260 465 aaPredicted RBP10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 SFTA3P0C7M3 94 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 OMGP23515 440 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 TRA2AQ13595 282 aaKnown RBP eCLIP10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 HSPB2Q16082 182 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 RTL6Q6ICC9 239 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 WDR74Q6RFH5 385 aaPredicted RBP10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 COMTD1Q86VU5 262 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 TERB2Q8NHR7 220 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 AKR1E2Q96JD6 320 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 ARRDC1-AS1Q9H2J1 176 aa10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 COA3Q9Y2R0 106 aaPredicted RBP10.38□□□□□ -0.75
CLSTN3-201ENST00000266546 A0A1B0GTH9 108 aa10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 FAM74A7A6NL05 159 aa10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 UTS2O95399 124 aa10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 SCAND1P57086 179 aa10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 FABP9Q0Z7S8 132 aa10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 FAM74A3Q4VXF1 159 aa10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 HIST2H3PS2Q5TEC6 136 aa10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 ZNF709Q8N972 641 aa10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 DTWD2Q8NBA8 298 aa10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 GLYATL2Q8WU03 294 aa10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 USB1Q9BQ65 265 aaKnown RBP10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 CHRNA10Q9GZZ6 450 aa10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 FBXO34Q9NWN3 711 aa10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 M0R296 226 aa10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 TP53I11O14683 189 aa10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 SIGLEC5O15389 551 aa10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 LRP3O75074 770 aa10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 WNT11O96014 354 aa10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 FCGR2CP31995 323 aa10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 RPL27P61353 136 aaKnown RBP10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 FOXC1Q12948 553 aa10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 PPP1R1AQ13522 171 aa10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 PRTGQ2VWP7 1150 aa10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 EEF1A1P5Q5VTE0 462 aa10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 HIST2H3AQ71DI3 136 aa10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 PRSS41Q7RTY9 318 aa10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 EXD3Q8N9H8 876 aa10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 BANF2Q9H503 90 aa10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 B3GALT5Q9Y2C3 310 aa10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 SPTBN1Q01082 2364 aaKnown RBP10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 TICRRQ7Z2Z1 1910 aa10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 NPIPA2E9PIF3 369 aa10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 NPIPA3F8WFD2 350 aa10.37□□□□□ -0.75
CLSTN3-201ENST00000266546 SLC33A1O00400 549 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms