RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 V9GY05 133 aa19.93■□□□□ 0.78
SMARCB1-201ENST00000263121 PIEZO2Q9H5I5 2752 aa19.92■□□□□ 0.78
SMARCB1-201ENST00000263121 VGLL3A8MV65 326 aa19.92■□□□□ 0.78
SMARCB1-201ENST00000263121 TBX1O43435 398 aa19.92■□□□□ 0.78
SMARCB1-201ENST00000263121 LYZL6O75951 148 aa19.92■□□□□ 0.78
SMARCB1-201ENST00000263121 COMMD2Q86X83 199 aa19.92■□□□□ 0.78
SMARCB1-201ENST00000263121 C1orf162Q8NEQ5 155 aaPredicted RBP19.92■□□□□ 0.78
SMARCB1-201ENST00000263121 OPN3Q9H1Y3 402 aaPredicted RBP19.92■□□□□ 0.78
SMARCB1-201ENST00000263121 SP140LQ9H930 580 aa19.92■□□□□ 0.78
SMARCB1-201ENST00000263121 COMMD3Q9UBI1 195 aa19.92■□□□□ 0.78
SMARCB1-201ENST00000263121 CKLFQ9UBR5 152 aa19.92■□□□□ 0.78
SMARCB1-201ENST00000263121 LOC100509620A0A075B734 347 aa19.91■□□□□ 0.78
SMARCB1-201ENST00000263121 IFITM5A6NNB3 132 aa19.91■□□□□ 0.78
SMARCB1-201ENST00000263121 RAD51DO75771 328 aa19.91■□□□□ 0.78
SMARCB1-201ENST00000263121 MAS1P04201 325 aa19.91■□□□□ 0.78
SMARCB1-201ENST00000263121 EDN3P14138 238 aa19.91■□□□□ 0.78
SMARCB1-201ENST00000263121 PPP3R1P63098 170 aa19.91■□□□□ 0.78
SMARCB1-201ENST00000263121 DCTN2Q13561 401 aaKnown RBP19.91■□□□□ 0.78
SMARCB1-201ENST00000263121 GSG1Q2KHT4 349 aa19.91■□□□□ 0.78
SMARCB1-201ENST00000263121 ZNF584Q8IVC4 421 aa19.91■□□□□ 0.78
SMARCB1-201ENST00000263121 CCDC36Q8IYA8 594 aa19.91■□□□□ 0.78
SMARCB1-201ENST00000263121 BORCS5Q969J3 196 aa19.91■□□□□ 0.78
SMARCB1-201ENST00000263121 FGGYQ96C11 551 aa19.91■□□□□ 0.78
SMARCB1-201ENST00000263121 ADAT3Q96EY9 351 aaPredicted RBP19.91■□□□□ 0.78
SMARCB1-201ENST00000263121 FAM71F1Q96KD3 344 aaPredicted RBP19.91■□□□□ 0.78
SMARCB1-201ENST00000263121 SFXN3Q9BWM7 321 aa19.91■□□□□ 0.78
SMARCB1-201ENST00000263121 J3QRK9 145 aa19.91■□□□□ 0.78
SMARCB1-201ENST00000263121 AIPO00170 330 aa19.91■□□□□ 0.78
SMARCB1-201ENST00000263121 TMEM127O75204 238 aa19.91■□□□□ 0.78
SMARCB1-201ENST00000263121 ZNF12P17014 697 aa19.91■□□□□ 0.78
SMARCB1-201ENST00000263121 GFOD2Q3B7J2 385 aa19.91■□□□□ 0.78
SMARCB1-201ENST00000263121 OR14K1Q8NGZ2 314 aa19.91■□□□□ 0.78
SMARCB1-201ENST00000263121 CEP19Q96LK0 163 aa19.91■□□□□ 0.78
SMARCB1-201ENST00000263121 ZNF75AQ96N20 296 aa19.91■□□□□ 0.78
SMARCB1-201ENST00000263121 CHD8Q9HCK8 2581 aa19.9■□□□□ 0.78
SMARCB1-201ENST00000263121 CIB4A0PJX0 185 aa19.9■□□□□ 0.78
SMARCB1-201ENST00000263121 ANXA2P2A6NMY6 339 aa19.9■□□□□ 0.78
SMARCB1-201ENST00000263121 LCATP04180 440 aa19.9■□□□□ 0.78
SMARCB1-201ENST00000263121 SFTPCP11686 197 aa19.9■□□□□ 0.78
SMARCB1-201ENST00000263121 HOXB1P14653 301 aaPredicted RBP19.9■□□□□ 0.78
SMARCB1-201ENST00000263121 STOMP27105 288 aa19.9■□□□□ 0.78
SMARCB1-201ENST00000263121 PSMD7P51665 324 aa19.9■□□□□ 0.78
SMARCB1-201ENST00000263121 ZNF45Q02386 682 aa19.9■□□□□ 0.78
SMARCB1-201ENST00000263121 PLP2Q04941 152 aa19.9■□□□□ 0.78
SMARCB1-201ENST00000263121 RBPJQ06330 500 aa19.9■□□□□ 0.78
SMARCB1-201ENST00000263121 COLCA1Q6ZS62 124 aa19.9■□□□□ 0.78
SMARCB1-201ENST00000263121 MDP1Q86V88 176 aa19.9■□□□□ 0.78
SMARCB1-201ENST00000263121 SERPINA12Q8IW75 414 aa19.9■□□□□ 0.78
SMARCB1-201ENST00000263121 CCDC54Q8NEL0 328 aa19.9■□□□□ 0.78
SMARCB1-201ENST00000263121 DNAAF1Q8NEP3 725 aa19.9■□□□□ 0.78
SMARCB1-201ENST00000263121 SGK3Q96BR1 496 aa19.9■□□□□ 0.78
SMARCB1-201ENST00000263121 C1QTNF5Q9BXJ0 243 aa19.9■□□□□ 0.78
SMARCB1-201ENST00000263121 ABRACLQ9P1F3 81 aa19.9■□□□□ 0.78
SMARCB1-201ENST00000263121 TINAGQ9UJW2 476 aa19.9■□□□□ 0.78
SMARCB1-201ENST00000263121 V9GYS6 101 aa19.9■□□□□ 0.78
SMARCB1-201ENST00000263121 HPGDSO60760 199 aa19.89■□□□□ 0.77
SMARCB1-201ENST00000263121 CFPP27918 469 aa19.89■□□□□ 0.77
SMARCB1-201ENST00000263121 DDOSTP39656 456 aa19.89■□□□□ 0.77
SMARCB1-201ENST00000263121 P2RY6Q15077 328 aa19.89■□□□□ 0.77
SMARCB1-201ENST00000263121 ZNF529Q6P280 563 aa19.89■□□□□ 0.77
SMARCB1-201ENST00000263121 BEND4Q6ZU67 534 aa19.89■□□□□ 0.77
SMARCB1-201ENST00000263121 POM121L2Q96KW2 1035 aa19.89■□□□□ 0.77
SMARCB1-201ENST00000263121 ZZEF1O43149 2961 aa19.89■□□□□ 0.77
SMARCB1-201ENST00000263121 DHRS3O75911 302 aa19.88■□□□□ 0.77
SMARCB1-201ENST00000263121 CD37P11049 281 aa19.88■□□□□ 0.77
SMARCB1-201ENST00000263121 SPANXN2Q5MJ10 180 aa19.88■□□□□ 0.77
SMARCB1-201ENST00000263121 CXorf67Q86X51 503 aaPredicted RBP19.88■□□□□ 0.77
SMARCB1-201ENST00000263121 OR51A2Q8NGJ7 313 aa19.88■□□□□ 0.77
SMARCB1-201ENST00000263121 TRMT10AQ8TBZ6 339 aaKnown RBP19.88■□□□□ 0.77
SMARCB1-201ENST00000263121 LOC390937A0A1W2PQ73 354 aa19.87■□□□□ 0.77
SMARCB1-201ENST00000263121 PAHP00439 452 aa19.87■□□□□ 0.77
SMARCB1-201ENST00000263121 ZNF20P17024 532 aa19.87■□□□□ 0.77
SMARCB1-201ENST00000263121 UBE2NP61088 152 aaKnown RBP19.87■□□□□ 0.77
SMARCB1-201ENST00000263121 TSC22D1Q15714 1073 aa19.87■□□□□ 0.77
SMARCB1-201ENST00000263121 HES5Q5TA89 166 aa19.87■□□□□ 0.77
SMARCB1-201ENST00000263121 ZNF391Q9UJN7 358 aa19.87■□□□□ 0.77
SMARCB1-201ENST00000263121 V9GYH0 126 aa19.87■□□□□ 0.77
SMARCB1-201ENST00000263121 INTS1Q8N201 2190 aaKnown RBP19.87■□□□□ 0.77
SMARCB1-201ENST00000263121 A0A0B4J203 849 aa19.87■□□□□ 0.77
SMARCB1-201ENST00000263121 C5orf49A4QMS7 147 aa19.87■□□□□ 0.77
SMARCB1-201ENST00000263121 MEGF11A6BM72 1044 aa19.87■□□□□ 0.77
SMARCB1-201ENST00000263121 A6NIN4 97 aa19.87■□□□□ 0.77
SMARCB1-201ENST00000263121 SERPINA5P05154 406 aa19.87■□□□□ 0.77
SMARCB1-201ENST00000263121 SNRPBP14678 240 aaKnown RBP19.87■□□□□ 0.77
SMARCB1-201ENST00000263121 CD40LGP29965 261 aa19.87■□□□□ 0.77
SMARCB1-201ENST00000263121 PPP5CP53041 499 aa19.87■□□□□ 0.77
SMARCB1-201ENST00000263121 PMPCAQ10713 525 aa19.87■□□□□ 0.77
SMARCB1-201ENST00000263121 GLYATL3Q5SZD4 288 aa19.87■□□□□ 0.77
SMARCB1-201ENST00000263121 C17orf78Q8N4C9 275 aa19.87■□□□□ 0.77
SMARCB1-201ENST00000263121 OR5D14Q8NGL3 314 aa19.87■□□□□ 0.77
SMARCB1-201ENST00000263121 REEP6Q96HR9 211 aa19.87■□□□□ 0.77
SMARCB1-201ENST00000263121 RGCCQ9H4X1 137 aa19.87■□□□□ 0.77
SMARCB1-201ENST00000263121 MTRF1O75570 445 aaKnown RBP19.86■□□□□ 0.77
SMARCB1-201ENST00000263121 GNALP38405 381 aa19.86■□□□□ 0.77
SMARCB1-201ENST00000263121 ZNF474Q6S9Z5 364 aaPredicted RBP19.86■□□□□ 0.77
SMARCB1-201ENST00000263121 WDR31Q8NA23 367 aa19.86■□□□□ 0.77
SMARCB1-201ENST00000263121 OR1M1Q8NGA1 313 aa19.86■□□□□ 0.77
SMARCB1-201ENST00000263121 OR5H6Q8NGV6 325 aa19.86■□□□□ 0.77
SMARCB1-201ENST00000263121 OR2AE1Q8NHA4 323 aa19.86■□□□□ 0.77
SMARCB1-201ENST00000263121 MS4A3Q96HJ5 214 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms