RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 CHRNA9Q9UGM1 479 aa10.93□□□□□ -0.66
SMG6-201ENST00000263073 PRELID3BQ9Y3B1 194 aa10.93□□□□□ -0.66
SMG6-201ENST00000263073 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.92□□□□□ -0.66
SMG6-201ENST00000263073 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.92□□□□□ -0.66
SMG6-201ENST00000263073 ADRA2CP18825 462 aa10.92□□□□□ -0.66
SMG6-201ENST00000263073 CRYBB2P43320 205 aa10.92□□□□□ -0.66
SMG6-201ENST00000263073 MZT1Q08AG7 82 aa10.92□□□□□ -0.66
SMG6-201ENST00000263073 FCRL6Q6DN72 434 aa10.92□□□□□ -0.66
SMG6-201ENST00000263073 C11orf87Q6NUJ2 197 aa10.92□□□□□ -0.66
SMG6-201ENST00000263073 TFAP2EQ6VUC0 442 aa10.92□□□□□ -0.66
SMG6-201ENST00000263073 C2orf50Q96LR7 162 aa10.92□□□□□ -0.66
SMG6-201ENST00000263073 UTP23Q9BRU9 249 aaKnown RBP10.92□□□□□ -0.66
SMG6-201ENST00000263073 MS4A7Q9GZW8 240 aaPredicted RBP10.92□□□□□ -0.66
SMG6-201ENST00000263073 DECR2Q9NUI1 292 aa10.92□□□□□ -0.66
SMG6-201ENST00000263073 NDRG3Q9UGV2 375 aa10.92□□□□□ -0.66
SMG6-201ENST00000263073 CNIH1O95406 144 aa10.92□□□□□ -0.66
SMG6-201ENST00000263073 PNPP00491 289 aa10.92□□□□□ -0.66
SMG6-201ENST00000263073 METTL15P1P0C7V9 234 aa10.92□□□□□ -0.66
SMG6-201ENST00000263073 ECI1P42126 302 aa10.92□□□□□ -0.66
SMG6-201ENST00000263073 SSX1Q16384 188 aa10.92□□□□□ -0.66
SMG6-201ENST00000263073 GLDNQ6ZMI3 551 aaPredicted RBP10.92□□□□□ -0.66
SMG6-201ENST00000263073 SHARPINQ9H0F6 387 aa10.92□□□□□ -0.66
SMG6-201ENST00000263073 LHX6Q9UPM6 363 aa10.92□□□□□ -0.66
SMG6-201ENST00000263073 PRRT4C9JH25 899 aa10.92□□□□□ -0.66
SMG6-201ENST00000263073 H3BMH7 237 aa10.92□□□□□ -0.66
SMG6-201ENST00000263073 ATF1P18846 271 aa10.92□□□□□ -0.66
SMG6-201ENST00000263073 PRPH2P23942 346 aa10.92□□□□□ -0.66
SMG6-201ENST00000263073 HLXQ14774 488 aaPredicted RBP10.92□□□□□ -0.66
SMG6-201ENST00000263073 C9orf152Q5JTZ5 239 aa10.92□□□□□ -0.66
SMG6-201ENST00000263073 ZNRF4Q8WWF5 429 aa10.92□□□□□ -0.66
SMG6-201ENST00000263073 SOX7Q9BT81 388 aa10.92□□□□□ -0.66
SMG6-201ENST00000263073 HDAC8Q9BY41 377 aa10.92□□□□□ -0.66
SMG6-201ENST00000263073 METTL12A8MUP2 240 aa10.92□□□□□ -0.66
SMG6-201ENST00000263073 OR5H8P0DN80 308 aa10.92□□□□□ -0.66
SMG6-201ENST00000263073 SELENOPP49908 381 aa10.92□□□□□ -0.66
SMG6-201ENST00000263073 CA5BP1Q8WTZ4 195 aa10.92□□□□□ -0.66
SMG6-201ENST00000263073 ZDHHC11Q9H8X9 412 aa10.92□□□□□ -0.66
SMG6-201ENST00000263073 ADGRL4Q9HBW9 690 aa10.92□□□□□ -0.66
SMG6-201ENST00000263073 TARM1B6A8C7 271 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 E5RGE8 158 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 TCAPO15273 167 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 NTN1O95631 604 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 CD46P15529 392 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 ARL16Q0P5N6 197 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 PCK2Q16822 640 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 NCMAPQ5T1S8 102 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 PLXDC2Q6UX71 529 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 C16orf52Q8NHV5 167 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 NSG2Q9Y328 171 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 TNFSF11O14788 317 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 LY86O95711 162 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 HMGA1P17096 107 aaKnown RBP10.91□□□□□ -0.66
SMG6-201ENST00000263073 CCL11P51671 97 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 SLC17A1Q14916 467 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 SPINK9Q5DT21 86 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 OR2A2Q6IF42 318 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 TIPARPQ7Z3E1 657 aaKnown RBP10.91□□□□□ -0.66
SMG6-201ENST00000263073 OR2W3Q7Z3T1 314 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 ZNF429Q86V71 674 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 MUC20Q8N307 709 aaPredicted RBP10.91□□□□□ -0.66
SMG6-201ENST00000263073 SCPEP1Q9HB40 452 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 A4GNTQ9UNA3 340 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 SLC17A4Q9Y2C5 497 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 PRSS37A4D1T9 235 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 OR2J3O76001 311 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 MMP15P51511 669 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 ZNF121P58317 390 aaPredicted RBP10.91□□□□□ -0.66
SMG6-201ENST00000263073 KIRREL2Q6UWL6 708 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 FBXL6Q8N531 539 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 KIR3DX1Q9H7L2 352 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 SLC25A19Q9HC21 320 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 DUSP22Q9NRW4 184 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 SNRPGP15A8MWD9 76 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 ALOX12BO75342 701 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 YIF1AO95070 293 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 MT-ATP6P00846 226 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 CTSLP07711 333 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 TBXA2RP21731 343 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 FGF7P21781 194 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 B3GNTL1Q67FW5 361 aaPredicted RBP10.91□□□□□ -0.66
SMG6-201ENST00000263073 TOMM20LQ6UXN7 152 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 LINC00299Q6ZSB3 139 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 MAML2Q8IZL2 1156 aaPredicted RBP10.91□□□□□ -0.66
SMG6-201ENST00000263073 ARIH2OSQ8N7S6 290 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 OR52N4Q8NGI2 321 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 OR2G2Q8NGZ5 317 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 SMIM4Q8WVI0 70 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 CTDSP1Q9GZU7 261 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 KLK8O60259 260 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 PAX6P26367 422 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 CXCL12P48061 93 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 VEGFBP49765 207 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 PRSS12P56730 875 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 ACVR1Q04771 509 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 SMUG1Q53HV7 270 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 SPATA46Q5T0L3 261 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 GALNT16Q8N428 558 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 DEFB127Q9H1M4 99 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 C6orf106Q9H6K1 298 aaPredicted RBP10.91□□□□□ -0.66
SMG6-201ENST00000263073 DLL4Q9NR61 685 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms