RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.33□□□□□ -0.11
SHANK3-201ENST00000262795 LRP5LA4QPB2 252 aa14.33□□□□□ -0.12
SHANK3-201ENST00000262795 TRABD2BA6NFA1 517 aa14.33□□□□□ -0.12
SHANK3-201ENST00000262795 ACP2P11117 423 aa14.33□□□□□ -0.12
SHANK3-201ENST00000262795 P2RX3P56373 397 aa14.33□□□□□ -0.12
SHANK3-201ENST00000262795 GAMTQ14353 236 aa14.33□□□□□ -0.12
SHANK3-201ENST00000262795 RCE1Q9Y256 329 aa14.33□□□□□ -0.12
SHANK3-201ENST00000262795 CTDSP2O14595 271 aa14.33□□□□□ -0.12
SHANK3-201ENST00000262795 KCNAB3O43448 404 aa14.33□□□□□ -0.12
SHANK3-201ENST00000262795 MT-ATP6P00846 226 aa14.33□□□□□ -0.12
SHANK3-201ENST00000262795 TUSC5Q8IXB3 177 aa14.33□□□□□ -0.12
SHANK3-201ENST00000262795 LGALS14Q8TCE9 139 aa14.33□□□□□ -0.12
SHANK3-201ENST00000262795 SLC7A6Q92536 515 aa14.33□□□□□ -0.12
SHANK3-201ENST00000262795 OR7C2O60412 319 aa14.33□□□□□ -0.12
SHANK3-201ENST00000262795 PEA15Q15121 130 aa14.33□□□□□ -0.12
SHANK3-201ENST00000262795 LSRQ86X29 649 aaPredicted RBP14.33□□□□□ -0.12
SHANK3-201ENST00000262795 OR4D9Q8NGE8 314 aa14.33□□□□□ -0.12
SHANK3-201ENST00000262795 METTL17Q9H7H0 456 aaPredicted RBP14.33□□□□□ -0.12
SHANK3-201ENST00000262795 PMP22Q01453 160 aa14.33□□□□□ -0.12
SHANK3-201ENST00000262795 RAB40BQ12829 278 aa14.33□□□□□ -0.12
SHANK3-201ENST00000262795 TRA2AQ13595 282 aaKnown RBP eCLIP14.33□□□□□ -0.12
SHANK3-201ENST00000262795 TFAP2EQ6VUC0 442 aa14.33□□□□□ -0.12
SHANK3-201ENST00000262795 TMEM102Q8N9M5 508 aaPredicted RBP14.33□□□□□ -0.12
SHANK3-201ENST00000262795 EAF1Q96JC9 268 aaPredicted RBP14.33□□□□□ -0.12
SHANK3-201ENST00000262795 CCL19Q99731 98 aa14.33□□□□□ -0.12
SHANK3-201ENST00000262795 POMT2Q9UKY4 750 aa14.33□□□□□ -0.12
SHANK3-201ENST00000262795 ACSM6Q6P461 480 aa14.33□□□□□ -0.12
SHANK3-201ENST00000262795 SPRED2Q7Z698 418 aa14.33□□□□□ -0.12
SHANK3-201ENST00000262795 NKAIN4Q8IVV8 208 aa14.33□□□□□ -0.12
SHANK3-201ENST00000262795 ZCCHC4Q9H5U6 513 aa14.33□□□□□ -0.12
SHANK3-201ENST00000262795 MYO7AQ13402 2215 aa14.32□□□□□ -0.12
SHANK3-201ENST00000262795 CDC34P49427 236 aaPredicted RBP14.32□□□□□ -0.12
SHANK3-201ENST00000262795 RPL22L1Q6P5R6 122 aaKnown RBP14.32□□□□□ -0.12
SHANK3-201ENST00000262795 SLC25A26Q70HW3 274 aa14.32□□□□□ -0.12
SHANK3-201ENST00000262795 LYG1Q8N1E2 194 aa14.32□□□□□ -0.12
SHANK3-201ENST00000262795 TAS2R5Q9NYW4 299 aa14.32□□□□□ -0.12
SHANK3-201ENST00000262795 TMEM235A6NFC5 223 aa14.32□□□□□ -0.12
SHANK3-201ENST00000262795 COX7A2P2O60397 106 aa14.32□□□□□ -0.12
SHANK3-201ENST00000262795 SHC1P29353 583 aa14.32□□□□□ -0.12
SHANK3-201ENST00000262795 FZD5Q13467 585 aa14.32□□□□□ -0.12
SHANK3-201ENST00000262795 DOK3Q7L591 496 aa14.32□□□□□ -0.12
SHANK3-201ENST00000262795 VN1R1Q9GZP7 353 aa14.32□□□□□ -0.12
SHANK3-201ENST00000262795 MASP2O00187 686 aa14.32□□□□□ -0.12
SHANK3-201ENST00000262795 C11orf91Q3C1V1 193 aa14.32□□□□□ -0.12
SHANK3-201ENST00000262795 SYT14P1Q58G82 188 aa14.32□□□□□ -0.12
SHANK3-201ENST00000262795 C19orf35Q6ZS72 473 aa14.32□□□□□ -0.12
SHANK3-201ENST00000262795 OR4C5Q8NGB2 326 aa14.32□□□□□ -0.12
SHANK3-201ENST00000262795 OR2AE1Q8NHA4 323 aa14.32□□□□□ -0.12
SHANK3-201ENST00000262795 ANKRD36CQ5JPF3 1778 aa14.32□□□□□ -0.12
SHANK3-201ENST00000262795 TFPI2P48307 235 aa14.32□□□□□ -0.12
SHANK3-201ENST00000262795 ATOH8Q96SQ7 321 aa14.32□□□□□ -0.12
SHANK3-201ENST00000262795 FBXL2Q9UKC9 423 aa14.32□□□□□ -0.12
SHANK3-201ENST00000262795 LPCAT3Q6P1A2 487 aa14.32□□□□□ -0.12
SHANK3-201ENST00000262795 GPR45Q9Y5Y3 372 aa14.32□□□□□ -0.12
SHANK3-201ENST00000262795 PATE4P0C8F1 98 aa14.31□□□□□ -0.12
SHANK3-201ENST00000262795 RPS25P62851 125 aaKnown RBP14.31□□□□□ -0.12
SHANK3-201ENST00000262795 GPR32P1Q8NGA4 272 aa14.31□□□□□ -0.12
SHANK3-201ENST00000262795 NANPQ8TBE9 248 aa14.31□□□□□ -0.12
SHANK3-201ENST00000262795 STACQ99469 402 aa14.31□□□□□ -0.12
SHANK3-201ENST00000262795 ZNF416Q9BWM5 594 aa14.31□□□□□ -0.12
SHANK3-201ENST00000262795 C20orf27Q9GZN8 174 aa14.31□□□□□ -0.12
SHANK3-201ENST00000262795 DIO1P49895 249 aa14.31□□□□□ -0.12
SHANK3-201ENST00000262795 CNR1P21554 472 aa14.31□□□□□ -0.12
SHANK3-201ENST00000262795 APEX1P27695 318 aaKnown RBP14.31□□□□□ -0.12
SHANK3-201ENST00000262795 ZNF133P52736 654 aaPredicted RBP14.31□□□□□ -0.12
SHANK3-201ENST00000262795 AVPI1Q5T686 147 aa14.31□□□□□ -0.12
SHANK3-201ENST00000262795 RFESDQ8TAC1 157 aa14.31□□□□□ -0.12
SHANK3-201ENST00000262795 HSPE1-MOB4S4R3N1 261 aa14.31□□□□□ -0.12
SHANK3-201ENST00000262795 LAMA4Q16363 1823 aa14.31□□□□□ -0.12
SHANK3-201ENST00000262795 A0A1B0GTH9 108 aa14.31□□□□□ -0.12
SHANK3-201ENST00000262795 SSSCA1O60232 199 aa14.31□□□□□ -0.12
SHANK3-201ENST00000262795 NME2P22392 152 aa14.31□□□□□ -0.12
SHANK3-201ENST00000262795 GCAP28676 217 aa14.31□□□□□ -0.12
SHANK3-201ENST00000262795 UCNP55089 124 aa14.31□□□□□ -0.12
SHANK3-201ENST00000262795 ZNF121P58317 390 aaPredicted RBP14.31□□□□□ -0.12
SHANK3-201ENST00000262795 FOXB2Q5VYV0 432 aa14.31□□□□□ -0.12
SHANK3-201ENST00000262795 TCTE3Q8IZS6 198 aa14.31□□□□□ -0.12
SHANK3-201ENST00000262795 TMEM99Q8N816 258 aa14.31□□□□□ -0.12
SHANK3-201ENST00000262795 ALG1L2C9J202 215 aa14.31□□□□□ -0.12
SHANK3-201ENST00000262795 ITGAMP11215 1152 aa14.31□□□□□ -0.12
SHANK3-201ENST00000262795 ABCD3P28288 659 aa14.31□□□□□ -0.12
SHANK3-201ENST00000262795 OR10D3Q8NH80 312 aa14.31□□□□□ -0.12
SHANK3-201ENST00000262795 CMBLQ96DG6 245 aa14.31□□□□□ -0.12
SHANK3-201ENST00000262795 IGHV3OR15-7A0A075B7D8 119 aa14.31□□□□□ -0.12
SHANK3-201ENST00000262795 FABP7O15540 132 aa14.31□□□□□ -0.12
SHANK3-201ENST00000262795 COTL1Q14019 142 aa14.31□□□□□ -0.12
SHANK3-201ENST00000262795 PERPQ96FX8 193 aa14.31□□□□□ -0.12
SHANK3-201ENST00000262795 RASL11BQ9BPW5 248 aa14.31□□□□□ -0.12
SHANK3-201ENST00000262795 LAT2Q9GZY6 243 aa14.31□□□□□ -0.12
SHANK3-201ENST00000262795 PPT1P50897 306 aa14.3□□□□□ -0.12
SHANK3-201ENST00000262795 KDM4DQ6B0I6 523 aa14.3□□□□□ -0.12
SHANK3-201ENST00000262795 CCDC190Q86UF4 302 aa14.3□□□□□ -0.12
SHANK3-201ENST00000262795 KTI12Q96EK9 354 aaPredicted RBP14.3□□□□□ -0.12
SHANK3-201ENST00000262795 SDF2Q99470 211 aa14.3□□□□□ -0.12
SHANK3-201ENST00000262795 ISYNA1Q9NPH2 558 aa14.3□□□□□ -0.12
SHANK3-201ENST00000262795 NFYAP23511 347 aaPredicted RBP14.3□□□□□ -0.12
SHANK3-201ENST00000262795 PLPP6Q8IY26 295 aa14.3□□□□□ -0.12
SHANK3-201ENST00000262795 SDR39U1Q9NRG7 319 aaPredicted RBP14.3□□□□□ -0.12
SHANK3-201ENST00000262795 TTC3P53804 2025 aa14.3□□□□□ -0.12
SHANK3-201ENST00000262795 ALDOCP09972 364 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms