RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 C1orf196B1AJZ1 125 aa14.18□□□□□ -0.14
LMNB1-201ENST00000261366 LDLRAD4O15165 306 aa14.18□□□□□ -0.14
LMNB1-201ENST00000261366 SSX5O60225 188 aa14.18□□□□□ -0.14
LMNB1-201ENST00000261366 HOXB2P14652 356 aa14.18□□□□□ -0.14
LMNB1-201ENST00000261366 FABP9Q0Z7S8 132 aa14.18□□□□□ -0.14
LMNB1-201ENST00000261366 LCN10Q6JVE6 187 aa14.18□□□□□ -0.14
LMNB1-201ENST00000261366 ZNF440Q8IYI8 595 aa14.18□□□□□ -0.14
LMNB1-201ENST00000261366 TMEM104Q8NE00 496 aa14.18□□□□□ -0.14
LMNB1-201ENST00000261366 SOX7Q9BT81 388 aa14.18□□□□□ -0.14
LMNB1-201ENST00000261366 ST6GALNAC5Q9BVH7 336 aa14.18□□□□□ -0.14
LMNB1-201ENST00000261366 hCG_1809904A0A1W2PP81 198 aa14.18□□□□□ -0.14
LMNB1-201ENST00000261366 A0A1W2PR64 198 aa14.18□□□□□ -0.14
LMNB1-201ENST00000261366 A0A1W2PRV1 198 aa14.18□□□□□ -0.14
LMNB1-201ENST00000261366 B4DGG1 531 aa14.18□□□□□ -0.14
LMNB1-201ENST00000261366 M0R036 132 aa14.18□□□□□ -0.14
LMNB1-201ENST00000261366 BGLAPP02818 100 aa14.18□□□□□ -0.14
LMNB1-201ENST00000261366 OR8U9P0C7N5 309 aa14.18□□□□□ -0.14
LMNB1-201ENST00000261366 EMP2P54851 167 aa14.18□□□□□ -0.14
LMNB1-201ENST00000261366 CLDN6P56747 220 aa14.18□□□□□ -0.14
LMNB1-201ENST00000261366 OR2A2Q6IF42 318 aa14.18□□□□□ -0.14
LMNB1-201ENST00000261366 WDFY1Q8IWB7 410 aa14.18□□□□□ -0.14
LMNB1-201ENST00000261366 ZDHHC22Q8N966 263 aa14.18□□□□□ -0.14
LMNB1-201ENST00000261366 OR8U1Q8NH10 309 aa14.18□□□□□ -0.14
LMNB1-201ENST00000261366 NECAB3Q96P71 396 aaPredicted RBP14.18□□□□□ -0.14
LMNB1-201ENST00000261366 C5orf66Q9H5L9 145 aa14.18□□□□□ -0.14
LMNB1-201ENST00000261366 TAF9BQ9HBM6 251 aa14.18□□□□□ -0.14
LMNB1-201ENST00000261366 R4GMQ9 66 aa14.18□□□□□ -0.14
LMNB1-201ENST00000261366 C2orf16Q68DN1 1984 aa14.17□□□□□ -0.14
LMNB1-201ENST00000261366 IGKV1D-43A0A0B4J1Z2 117 aa14.17□□□□□ -0.14
LMNB1-201ENST00000261366 SOCS1O15524 211 aa14.17□□□□□ -0.14
LMNB1-201ENST00000261366 ZNF14P17017 642 aaPredicted RBP14.17□□□□□ -0.14
LMNB1-201ENST00000261366 GLO1Q04760 184 aa14.17□□□□□ -0.14
LMNB1-201ENST00000261366 ANKRD55Q3KP44 614 aa14.17□□□□□ -0.14
LMNB1-201ENST00000261366 Q6ZSR6 202 aa14.17□□□□□ -0.14
LMNB1-201ENST00000261366 MAMDC2Q7Z304 686 aaPredicted RBP14.17□□□□□ -0.14
LMNB1-201ENST00000261366 OR5D18Q8NGL1 313 aa14.17□□□□□ -0.14
LMNB1-201ENST00000261366 TSLPQ969D9 159 aa14.17□□□□□ -0.14
LMNB1-201ENST00000261366 DZANK1Q9NVP4 752 aa14.17□□□□□ -0.14
LMNB1-201ENST00000261366 MED29Q9NX70 200 aa14.17□□□□□ -0.14
LMNB1-201ENST00000261366 GHRLQ9UBU3 117 aa14.17□□□□□ -0.14
LMNB1-201ENST00000261366 RAB22AQ9UL26 194 aa14.17□□□□□ -0.14
LMNB1-201ENST00000261366 ZNF354AO60765 605 aaPredicted RBP14.17□□□□□ -0.14
LMNB1-201ENST00000261366 IFNA4P05014 189 aa14.17□□□□□ -0.14
LMNB1-201ENST00000261366 ZNF44P15621 663 aa14.17□□□□□ -0.14
LMNB1-201ENST00000261366 NQO2P16083 231 aa14.17□□□□□ -0.14
LMNB1-201ENST00000261366 GLRA1P23415 457 aa14.17□□□□□ -0.14
LMNB1-201ENST00000261366 C10orf91Q5T1B1 145 aa14.17□□□□□ -0.14
LMNB1-201ENST00000261366 FNDC7Q5VTL7 733 aa14.17□□□□□ -0.14
LMNB1-201ENST00000261366 FDX2Q6P4F2 183 aa14.17□□□□□ -0.14
LMNB1-201ENST00000261366 PPP1R3BQ86XI6 285 aa14.17□□□□□ -0.14
LMNB1-201ENST00000261366 MISPQ8IVT2 679 aa14.17□□□□□ -0.14
LMNB1-201ENST00000261366 IP6K3Q96PC2 410 aa14.17□□□□□ -0.14
LMNB1-201ENST00000261366 EMC6Q9BV81 110 aa14.17□□□□□ -0.14
LMNB1-201ENST00000261366 G6PC2Q9NQR9 355 aa14.17□□□□□ -0.14
LMNB1-201ENST00000261366 ZNF217O75362 1048 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 H2BFMP0C1H6 154 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 RAB6AP20340 208 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 PTAFRP25105 342 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 CAV2P51636 162 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 FOXL2P58012 376 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 S100A12P80511 92 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 HHEXQ03014 270 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.16□□□□□ -0.142e-6■□□□□ 10.1
LMNB1-201ENST00000261366 Q6ZRG5 221 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 PGAP1Q75T13 922 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 TMPRSS9Q7Z410 1059 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 PNLDC1Q8NA58 520 aaKnown RBP14.16□□□□□ -0.14
LMNB1-201ENST00000261366 NPRL2Q8WTW4 380 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 TCEAL3Q969E4 200 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 TMEM230Q96A57 120 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 MIOXQ9UGB7 285 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 SPAG17Q6Q759 2223 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 MEGF11A6BM72 1044 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 SYT7O43581 403 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 KLF8O95600 359 aaPredicted RBP14.16□□□□□ -0.14
LMNB1-201ENST00000261366 SCGB1D2O95969 90 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 OPN1LWP04000 364 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 HLA-GP17693 338 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 BCKDHBP21953 392 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 OR1D4P47884 311 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 FUT7Q11130 342 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 ARFRP1Q13795 201 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 ADAM5Q6NVV9 412 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 OR13H1Q8NG92 308 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 LIPHQ8WWY8 451 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 THRSPQ92748 146 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 MAP3K3Q99759 626 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 NUDT22Q9BRQ3 303 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 CHRDQ9H2X0 955 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 NKX2-4Q9H2Z4 354 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 PDE7BQ9NP56 450 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 OBP2AQ9NY56 170 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 SLC2A8Q9NY64 477 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 PCOLCE2Q9UKZ9 415 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 AMDHD2Q9Y303 409 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 TRAV36DV7A0A075B6V5 113 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 A0A1W2PPH5 198 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 ARG1P05089 322 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 IL12BP29460 328 aa14.16□□□□□ -0.14
LMNB1-201ENST00000261366 KIR2DL1P43626 348 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms