RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 NDUFAF1Q9Y375 327 aa3.14□□□□□ -1.91
CCDC54-201ENST00000261058 TBL2Q9Y4P3 447 aaKnown RBP3.14□□□□□ -1.91
CCDC54-201ENST00000261058 MMACHCQ9Y4U1 282 aa3.14□□□□□ -1.91
CCDC54-201ENST00000261058 OARD1Q9Y530 152 aa3.14□□□□□ -1.91
CCDC54-201ENST00000261058 ARHGAP31Q2M1Z3 1444 aa3.14□□□□□ -1.91
CCDC54-201ENST00000261058 MIA2Q96PC5 1412 aa3.14□□□□□ -1.91
CCDC54-201ENST00000261058 ADGRA3Q8IWK6 1321 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 ZNF518AQ6AHZ1 1483 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 NSG1A0A0A6YYJ2 146 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 KRTAP9-6A8MVA2 160 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 H3BMQ9 156 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 SNAI2O43623 268 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 ENTPD5O75356 428 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 LYPLA1O75608 230 aaPredicted RBP3.13□□□□□ -1.91
CCDC54-201ENST00000261058 LYPD3O95274 346 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 AP2A1O95782 977 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 P04436 131 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 FBP1P09467 338 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 DNAH10OSP0CZ25 163 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 PGAM1P18669 254 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 HTR2CP28335 458 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 GABRR2P28476 465 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 KDELR2P33947 212 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 OPRD1P41143 372 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 MAP3K8P41279 467 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 NSG1P42857 185 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 RGS6P49758 472 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 RPL14P50914 215 aaKnown RBP3.13□□□□□ -1.91
CCDC54-201ENST00000261058 PRKXP51817 358 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 NAA20P61599 178 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 NDPQ00604 133 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 TNFRSF9Q07011 255 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 MGAT3Q09327 533 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 PDIA2Q13087 525 aaKnown RBP3.13□□□□□ -1.91
CCDC54-201ENST00000261058 TRAM2Q15035 370 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 SLC9A3R2Q15599 337 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 OR4D1Q15615 310 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 KCNJ8Q15842 424 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 TNXAQ16473 311 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 DUSP7Q16829 419 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 DEFB115Q30KQ5 88 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 PGGHGQ32M88 737 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 TNFAIP8L3Q5GJ75 292 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 LY6G6FQ5SQ64 297 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 SPESP1Q6UW49 350 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 Q6ZSR3 168 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 ZNF589Q86UQ0 364 aaPredicted RBP3.13□□□□□ -1.91
CCDC54-201ENST00000261058 PPP1R27Q86WC6 154 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 SLC35F2Q8IXU6 374 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 CCDC71LQ8N9Z2 235 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 OR2AP1Q8NGE2 309 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 PLPPR1Q8TBJ4 325 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 RNF133Q8WVZ7 376 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 DGCR14Q96DF8 476 aaKnown RBP3.13□□□□□ -1.91
CCDC54-201ENST00000261058 FAM210BQ96KR6 192 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 SERPINB12Q96P63 405 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 ZNF184Q99676 751 aaPredicted RBP3.13□□□□□ -1.91
CCDC54-201ENST00000261058 NIPSNAP1Q9BPW8 284 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 KLHDC3Q9BQ90 382 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 UTP23Q9BRU9 249 aaKnown RBP3.13□□□□□ -1.91
CCDC54-201ENST00000261058 NMUR2Q9GZQ4 415 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 PCBD2Q9H0N5 130 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 NXF5Q9H1B4 397 aaKnown RBP3.13□□□□□ -1.91
CCDC54-201ENST00000261058 DEFB129Q9H1M3 183 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 C1orf198Q9H425 327 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 GLIPR2Q9H4G4 154 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 TRABDQ9H4I3 376 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 PLGRKTQ9HBL7 147 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 ANKHQ9HCJ1 492 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 IFT46Q9NQC8 304 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 PAK1IP1Q9NWT1 392 aaPredicted RBP3.13□□□□□ -1.91
CCDC54-201ENST00000261058 COA4Q9NYJ1 87 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 GUCA1BQ9UMX6 200 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 SCML2Q9UQR0 700 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 AK6Q9Y3D8 172 aaKnown RBP3.13□□□□□ -1.91
CCDC54-201ENST00000261058 TSSC4Q9Y5U2 329 aaPredicted RBP3.13□□□□□ -1.91
CCDC54-201ENST00000261058 ALG6Q9Y672 507 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 CHD4Q14839 1912 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 KDM5BQ9UGL1 1544 aa3.13□□□□□ -1.91
CCDC54-201ENST00000261058 IGHV1OR15-1A0A075B7D0 117 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 A0A1B0GV72 72 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 A0A1W2PQL4 384 aaPredicted RBP3.12□□□□□ -1.91
CCDC54-201ENST00000261058 PRSS37A4D1T9 235 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 EVPLLA8MZ36 301 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 G3V4G9 280 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 H3BN98 237 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 KPNA3O00505 521 aaPredicted RBP3.12□□□□□ -1.91
CCDC54-201ENST00000261058 PRMT5O14744 637 aaPredicted RBP3.12□□□□□ -1.91
CCDC54-201ENST00000261058 B4GALT5O43286 388 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 PSTPIP1O43586 416 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 SHOX2O60902 331 aaPredicted RBP3.12□□□□□ -1.91
CCDC54-201ENST00000261058 IFNGP01579 166 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 MMP1P03956 469 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 IFNW1P05000 195 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 IFNA4P05014 189 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 S100A8P05109 93 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 KLK1P06870 262 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 RNH1P13489 461 aaKnown RBP3.12□□□□□ -1.91
CCDC54-201ENST00000261058 SERPINA2P20848 420 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 CXCR2P25025 360 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms