RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 OR51E1Q8TCB6 317 aa13.49□□□□□ -0.25
GYPC-201ENST00000259254 C1QTNF5Q9BXJ0 243 aa13.49□□□□□ -0.25
GYPC-201ENST00000259254 EXOSC4Q9NPD3 245 aaKnown RBP13.49□□□□□ -0.25
GYPC-201ENST00000259254 NDUFB11Q9NX14 153 aa13.49□□□□□ -0.25
GYPC-201ENST00000259254 ZNF281Q9Y2X9 895 aa13.49□□□□□ -0.25
GYPC-201ENST00000259254 KLF2Q9Y5W3 355 aaPredicted RBP13.49□□□□□ -0.25
GYPC-201ENST00000259254 INTS1Q8N201 2190 aaKnown RBP13.49□□□□□ -0.25
GYPC-201ENST00000259254 PCNX1Q96RV3 2341 aa13.48□□□□□ -0.25
GYPC-201ENST00000259254 LOC107986453A0A1B0GWG9 222 aa13.48□□□□□ -0.25
GYPC-201ENST00000259254 C5orf63A6NC05 138 aa13.48□□□□□ -0.25
GYPC-201ENST00000259254 CCDC160A6NGH7 325 aa13.48□□□□□ -0.25
GYPC-201ENST00000259254 NGFP01138 241 aa13.48□□□□□ -0.25
GYPC-201ENST00000259254 CD53P19397 219 aa13.48□□□□□ -0.25
GYPC-201ENST00000259254 PTAFRP25105 342 aa13.48□□□□□ -0.25
GYPC-201ENST00000259254 CD40P25942 277 aa13.48□□□□□ -0.25
GYPC-201ENST00000259254 CALCRP30988 508 aa13.48□□□□□ -0.25
GYPC-201ENST00000259254 GABRA5P31644 462 aa13.48□□□□□ -0.25
GYPC-201ENST00000259254 TGFBR2P37173 567 aa13.48□□□□□ -0.25
GYPC-201ENST00000259254 PEX19P40855 299 aa13.48□□□□□ -0.25
GYPC-201ENST00000259254 KIR2DL3P43628 341 aa13.48□□□□□ -0.25
GYPC-201ENST00000259254 GLYATL3Q5SZD4 288 aa13.48□□□□□ -0.25
GYPC-201ENST00000259254 TMEM244Q5VVB8 128 aa13.48□□□□□ -0.25
GYPC-201ENST00000259254 GPR107Q5VW38 600 aa13.48□□□□□ -0.25
GYPC-201ENST00000259254 SEZ6L2Q6UXD5 910 aa13.48□□□□□ -0.25
GYPC-201ENST00000259254 UNQ6126/PRO20091Q6UXV3 157 aa13.48□□□□□ -0.25
GYPC-201ENST00000259254 RFPL4BQ6ZWI9 263 aa13.48□□□□□ -0.25
GYPC-201ENST00000259254 PRSS45Q7RTY3 260 aa13.48□□□□□ -0.25
GYPC-201ENST00000259254 CLVS1Q8IUQ0 354 aaPredicted RBP13.48□□□□□ -0.25
GYPC-201ENST00000259254 ZNF101Q8IZC7 436 aa13.48□□□□□ -0.25
GYPC-201ENST00000259254 PIAS4Q8N2W9 510 aaPredicted RBP13.48□□□□□ -0.25
GYPC-201ENST00000259254 OR13C5Q8NGS8 318 aa13.48□□□□□ -0.25
GYPC-201ENST00000259254 TSEN15Q8WW01 171 aaKnown RBP13.48□□□□□ -0.25
GYPC-201ENST00000259254 YIPF6Q96EC8 236 aa13.48□□□□□ -0.25
GYPC-201ENST00000259254 FAM71F1Q96KD3 344 aaPredicted RBP13.48□□□□□ -0.25
GYPC-201ENST00000259254 PGLYRP3Q96LB9 341 aa13.48□□□□□ -0.25
GYPC-201ENST00000259254 DACH2Q96NX9 599 aa13.48□□□□□ -0.25
GYPC-201ENST00000259254 ESRP2Q9H6T0 727 aaKnown RBP13.48□□□□□ -0.25
GYPC-201ENST00000259254 PTTG3PQ9NZH4 202 aa13.48□□□□□ -0.25
GYPC-201ENST00000259254 ZNF319Q9P2F9 582 aa13.48□□□□□ -0.25
GYPC-201ENST00000259254 SPEF1Q9Y4P9 236 aa13.48□□□□□ -0.25
GYPC-201ENST00000259254 ATP6V1G2-DDX39BF2Z307 99 aa13.47□□□□□ -0.25
GYPC-201ENST00000259254 XRCC2O43543 280 aa13.47□□□□□ -0.25
GYPC-201ENST00000259254 SYT7O43581 403 aa13.47□□□□□ -0.25
GYPC-201ENST00000259254 SMPD2O60906 423 aa13.47□□□□□ -0.25
GYPC-201ENST00000259254 NOL3O60936 208 aaKnown RBP13.47□□□□□ -0.25
GYPC-201ENST00000259254 RGS9O75916 674 aaPredicted RBP13.47□□□□□ -0.25
GYPC-201ENST00000259254 CD1AP06126 327 aa13.47□□□□□ -0.25
GYPC-201ENST00000259254 ZNF35P13682 527 aa13.47□□□□□ -0.25
GYPC-201ENST00000259254 ACHEP22303 614 aa13.47□□□□□ -0.25
GYPC-201ENST00000259254 ANOS1P23352 680 aa13.47□□□□□ -0.25
GYPC-201ENST00000259254 GADD45AP24522 165 aa13.47□□□□□ -0.25
GYPC-201ENST00000259254 PSMA1P25786 263 aaKnown RBP13.47□□□□□ -0.25
GYPC-201ENST00000259254 BSPH1Q075Z2 132 aa13.47□□□□□ -0.25
GYPC-201ENST00000259254 TRAM1Q15629 374 aa13.47□□□□□ -0.25
GYPC-201ENST00000259254 YIF1BQ5BJH7 314 aa13.47□□□□□ -0.25
GYPC-201ENST00000259254 SP5Q6BEB4 398 aaPredicted RBP13.47□□□□□ -0.25
GYPC-201ENST00000259254 MRPL21Q7Z2W9 205 aaKnown RBP13.47□□□□□ -0.25
GYPC-201ENST00000259254 MS4A15Q8N5U1 240 aa13.47□□□□□ -0.25
GYPC-201ENST00000259254 OR5L1Q8NGL2 311 aa13.47□□□□□ -0.25
GYPC-201ENST00000259254 OR1J1Q8NGS3 322 aa13.47□□□□□ -0.25
GYPC-201ENST00000259254 OR2AE1Q8NHA4 323 aa13.47□□□□□ -0.25
GYPC-201ENST00000259254 RPS4Y2Q8TD47 263 aa13.47□□□□□ -0.25
GYPC-201ENST00000259254 GPR148Q8TDV2 347 aa13.47□□□□□ -0.25
GYPC-201ENST00000259254 AKAP1Q92667 903 aaKnown RBP eCLIP13.47□□□□□ -0.25
GYPC-201ENST00000259254 SGK3Q96BR1 496 aa13.47□□□□□ -0.25
GYPC-201ENST00000259254 REEP6Q96HR9 211 aa13.47□□□□□ -0.25
GYPC-201ENST00000259254 CHCHD6Q9BRQ6 235 aa13.47□□□□□ -0.25
GYPC-201ENST00000259254 FUNDC2Q9BWH2 189 aa13.47□□□□□ -0.25
GYPC-201ENST00000259254 GPR84Q9NQS5 396 aa13.47□□□□□ -0.25
GYPC-201ENST00000259254 TBCCD1Q9NVR7 557 aa13.47□□□□□ -0.25
GYPC-201ENST00000259254 HHLA2Q9UM44 414 aa13.47□□□□□ -0.25
GYPC-201ENST00000259254 STUB1Q9UNE7 303 aa13.47□□□□□ -0.25
GYPC-201ENST00000259254 STARD10Q9Y365 291 aa13.47□□□□□ -0.25
GYPC-201ENST00000259254 CACNA1CQ13936 2221 aa13.47□□□□□ -0.25
GYPC-201ENST00000259254 A0A0U1RQV5 110 aa13.46□□□□□ -0.25
GYPC-201ENST00000259254 LOC100506127A0A0U1RQW1 187 aa13.46□□□□□ -0.25
GYPC-201ENST00000259254 DPRXA6NFQ7 191 aa13.46□□□□□ -0.25
GYPC-201ENST00000259254 C19orf84I3L1E1 186 aa13.46□□□□□ -0.25
GYPC-201ENST00000259254 ABCD4O14678 606 aa13.46□□□□□ -0.25
GYPC-201ENST00000259254 SERPINA3P01011 423 aa13.46□□□□□ -0.25
GYPC-201ENST00000259254 HLA-DPB1P04440 258 aa13.46□□□□□ -0.25
GYPC-201ENST00000259254 NR4A1P22736 598 aa13.46□□□□□ -0.25
GYPC-201ENST00000259254 RAD52P43351 418 aa13.46□□□□□ -0.25
GYPC-201ENST00000259254 SOX2P48431 317 aa13.46□□□□□ -0.25
GYPC-201ENST00000259254 UCP2P55851 309 aa13.46□□□□□ -0.25
GYPC-201ENST00000259254 PPP1CBP62140 327 aa13.46□□□□□ -0.25
GYPC-201ENST00000259254 SPOCK1Q08629 439 aa13.46□□□□□ -0.25
GYPC-201ENST00000259254 SNTB2Q13425 540 aaKnown RBP13.46□□□□□ -0.25
GYPC-201ENST00000259254 TIMM50Q3ZCQ8 353 aa13.46□□□□□ -0.25
GYPC-201ENST00000259254 SPATA46Q5T0L3 261 aa13.46□□□□□ -0.25
GYPC-201ENST00000259254 COLCA1Q6ZS62 124 aa13.46□□□□□ -0.25
GYPC-201ENST00000259254 DOK3Q7L591 496 aa13.46□□□□□ -0.25
GYPC-201ENST00000259254 OR13C3Q8NGS6 347 aa13.46□□□□□ -0.25
GYPC-201ENST00000259254 OR10AC1Q8NH08 325 aa13.46□□□□□ -0.25
GYPC-201ENST00000259254 RGP1Q92546 391 aaPredicted RBP13.46□□□□□ -0.25
GYPC-201ENST00000259254 MARVELD3Q96A59 401 aa13.46□□□□□ -0.25
GYPC-201ENST00000259254 PLPPR2Q96GM1 343 aa13.46□□□□□ -0.25
GYPC-201ENST00000259254 OR51E2Q9H255 320 aa13.46□□□□□ -0.25
GYPC-201ENST00000259254 RGCCQ9H4X1 137 aa13.46□□□□□ -0.25
GYPC-201ENST00000259254 SSR3Q9UNL2 185 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms