RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 POLDIP2Q9Y2S7 368 aa16.88■□□□□ 0.29
SMARCC1-201ENST00000254480 LMO7DNF2Z398 122 aa16.88■□□□□ 0.29
SMARCC1-201ENST00000254480 DCTDP32321 178 aa16.88■□□□□ 0.29
SMARCC1-201ENST00000254480 DBPQ10586 325 aaPredicted RBP16.88■□□□□ 0.29
SMARCC1-201ENST00000254480 TMEM215Q68D42 235 aa16.88■□□□□ 0.29
SMARCC1-201ENST00000254480 TMED6Q8WW62 240 aa16.88■□□□□ 0.29
SMARCC1-201ENST00000254480 NTN4Q9HB63 628 aa16.88■□□□□ 0.29
SMARCC1-201ENST00000254480 TSTD3H0UI37 97 aa16.88■□□□□ 0.29
SMARCC1-201ENST00000254480 PTHLHP12272 177 aa16.88■□□□□ 0.29
SMARCC1-201ENST00000254480 RAB13P51153 203 aa16.88■□□□□ 0.29
SMARCC1-201ENST00000254480 PNLIPRP2P54317 469 aa16.88■□□□□ 0.29
SMARCC1-201ENST00000254480 UBE2IP63279 158 aaKnown RBP16.88■□□□□ 0.29
SMARCC1-201ENST00000254480 EMC4Q5J8M3 183 aa16.88■□□□□ 0.29
SMARCC1-201ENST00000254480 OR10G3Q8NGC4 313 aa16.88■□□□□ 0.29
SMARCC1-201ENST00000254480 PHYHIPQ92561 330 aa16.88■□□□□ 0.29
SMARCC1-201ENST00000254480 AK3Q9UIJ7 227 aa16.88■□□□□ 0.29
SMARCC1-201ENST00000254480 MKRN2OSH3BPM6 223 aa16.88■□□□□ 0.29
SMARCC1-201ENST00000254480 FMODQ06828 376 aa16.88■□□□□ 0.29
SMARCC1-201ENST00000254480 OR1C1Q15619 314 aa16.88■□□□□ 0.29
SMARCC1-201ENST00000254480 C15orf54Q8N8G6 183 aa16.88■□□□□ 0.29
SMARCC1-201ENST00000254480 OR1J1Q8NGS3 322 aa16.88■□□□□ 0.29
SMARCC1-201ENST00000254480 ST8SIA3O43173 380 aa16.87■□□□□ 0.29
SMARCC1-201ENST00000254480 RPS23P62266 143 aaKnown RBP16.87■□□□□ 0.29
SMARCC1-201ENST00000254480 RAC1P63000 192 aa16.87■□□□□ 0.29
SMARCC1-201ENST00000254480 FAM117AQ9C073 453 aa16.87■□□□□ 0.29
SMARCC1-201ENST00000254480 GPR37O15354 613 aa16.87■□□□□ 0.29
SMARCC1-201ENST00000254480 EXOSC2Q13868 293 aaKnown RBP16.87■□□□□ 0.29
SMARCC1-201ENST00000254480 CAMKMTQ7Z624 323 aa16.87■□□□□ 0.29
SMARCC1-201ENST00000254480 RIMKLAQ8IXN7 391 aa16.87■□□□□ 0.29
SMARCC1-201ENST00000254480 MRGPRX4Q96LA9 322 aa16.87■□□□□ 0.29
SMARCC1-201ENST00000254480 FIGNL2A6NMB9 653 aa16.87■□□□□ 0.29
SMARCC1-201ENST00000254480 TMEM92Q6UXU6 159 aa16.87■□□□□ 0.29
SMARCC1-201ENST00000254480 OR13C8Q8NGS7 320 aa16.87■□□□□ 0.29
SMARCC1-201ENST00000254480 TMEM43Q9BTV4 400 aa16.87■□□□□ 0.29
SMARCC1-201ENST00000254480 ADAMTSL3P82987 1691 aa16.87■□□□□ 0.29
SMARCC1-201ENST00000254480 KRBOX1C9JBD0 128 aa16.87■□□□□ 0.29
SMARCC1-201ENST00000254480 AIPO00170 330 aa16.87■□□□□ 0.29
SMARCC1-201ENST00000254480 ABCD3P28288 659 aa16.87■□□□□ 0.29
SMARCC1-201ENST00000254480 FAM53BQ14153 422 aa16.87■□□□□ 0.29
SMARCC1-201ENST00000254480 CDK5R1Q15078 307 aa16.87■□□□□ 0.29
SMARCC1-201ENST00000254480 ZNF793Q6ZN11 406 aa16.87■□□□□ 0.29
SMARCC1-201ENST00000254480 C17orf107Q6ZR85 190 aa16.87■□□□□ 0.29
SMARCC1-201ENST00000254480 C20orf196Q8IYI0 205 aa16.87■□□□□ 0.29
SMARCC1-201ENST00000254480 RELL2Q8NC24 303 aaPredicted RBP16.87■□□□□ 0.29
SMARCC1-201ENST00000254480 SMIM19Q96E16 107 aa16.87■□□□□ 0.29
SMARCC1-201ENST00000254480 KIAA1456Q9P272 454 aa16.87■□□□□ 0.29
SMARCC1-201ENST00000254480 KLK11Q9UBX7 282 aa16.87■□□□□ 0.29
SMARCC1-201ENST00000254480 V9GYS6 101 aa16.87■□□□□ 0.29
SMARCC1-201ENST00000254480 MITD1Q8WV92 249 aa16.87■□□□□ 0.29
SMARCC1-201ENST00000254480 RBPMSQ93062 196 aaKnown RBP16.87■□□□□ 0.29
SMARCC1-201ENST00000254480 SLC35E1Q96K37 410 aa16.87■□□□□ 0.29
SMARCC1-201ENST00000254480 H3BP45 60 aa16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 INSL4Q14641 139 aa16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 FBXW5Q969U6 566 aa16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 MRPS24Q96EL2 167 aaKnown RBP16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 JAM3Q9BX67 310 aa16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 B9D1Q9UPM9 204 aa16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 XRCC2O43543 280 aa16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 CTSVO60911 334 aa16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 OR2F2O95006 317 aa16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 COL9A1P20849 921 aa16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 ZNF573Q86YE8 665 aa16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 UBALD2Q8IYN6 164 aa16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 CISD2Q8N5K1 135 aaKnown RBP16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 OR10V1Q8NGI7 309 aa16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 KCNE4Q8WWG9 221 aa16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 OR2A14Q96R47 310 aa16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 A4GNTQ9UNA3 340 aa16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 ARPC4-TTLL3A0A0A6YYG9 625 aa16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 PMS2P1A4D2B8 440 aa16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 IFITM5A6NNB3 132 aa16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 F6UZH7 168 aa16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 ARPC3O15145 178 aa16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 RRASP10301 218 aa16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 Q7L0L9 218 aa16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 ISYNA1Q9NPH2 558 aa16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 BTBD17A6NE02 478 aa16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 DHHO43323 396 aa16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 LRP3O75074 770 aa16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 UBE2G2P60604 165 aa16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 CDC20BQ86Y33 519 aa16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 OR4S1Q8NGB4 309 aa16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 SPACA9Q96E40 222 aaPredicted RBP16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 NDRG3Q9UGV2 375 aa16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 CCL2P13500 99 aa16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 S100A7P31151 101 aa16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 ZXDAP98168 799 aa16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 ELFN2Q5R3F8 820 aa16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 OR1L3Q8NH93 324 aa16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 OR2V1Q8NHB1 315 aa16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 KISS1RQ969F8 398 aaPredicted RBP16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 LINC00615Q96LM1 132 aaPredicted RBP16.86■□□□□ 0.29
SMARCC1-201ENST00000254480 SERTM2A0A1B0GWG4 89 aa16.85■□□□□ 0.29
SMARCC1-201ENST00000254480 H2AFB1P0C5Y9 115 aa16.85■□□□□ 0.29
SMARCC1-201ENST00000254480 A0A087WUJ7 227 aa16.85■□□□□ 0.29
SMARCC1-201ENST00000254480 HLA-HP01893 362 aa16.85■□□□□ 0.29
SMARCC1-201ENST00000254480 UBE2G1P62253 170 aa16.85■□□□□ 0.29
SMARCC1-201ENST00000254480 ZNF705AQ6ZN79 300 aaPredicted RBP16.85■□□□□ 0.29
SMARCC1-201ENST00000254480 TP53I13Q8NBR0 393 aaPredicted RBP16.85■□□□□ 0.29
SMARCC1-201ENST00000254480 OR2AK2Q8NG84 335 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms