RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 MYEF2Q9P2K5 600 aaKnown RBP15.12■□□□□ 0.01
FOXA1-201ENST00000250448 PRSS37A4D1T9 235 aa15.12■□□□□ 0.01
FOXA1-201ENST00000250448 TMEM235A6NFC5 223 aa15.12■□□□□ 0.01
FOXA1-201ENST00000250448 ZBTB25P24278 435 aa15.12■□□□□ 0.01
FOXA1-201ENST00000250448 CASRP41180 1078 aa15.12■□□□□ 0.01
FOXA1-201ENST00000250448 CAPZA1P52907 286 aa15.12■□□□□ 0.01
FOXA1-201ENST00000250448 IL11RAQ14626 422 aa15.12■□□□□ 0.01
FOXA1-201ENST00000250448 MEF2DQ14814 521 aa15.12■□□□□ 0.01
FOXA1-201ENST00000250448 NKPD1Q17RQ9 610 aa15.12■□□□□ 0.01
FOXA1-201ENST00000250448 OR10K2Q6IF99 312 aa15.12■□□□□ 0.01
FOXA1-201ENST00000250448 KCTD18Q6PI47 426 aaPredicted RBP15.12■□□□□ 0.01
FOXA1-201ENST00000250448 UQCC3Q6UW78 93 aa15.12■□□□□ 0.01
FOXA1-201ENST00000250448 LYG2Q86SG7 212 aa15.12■□□□□ 0.01
FOXA1-201ENST00000250448 ZNF175Q9Y473 711 aa15.12■□□□□ 0.01
FOXA1-201ENST00000250448 DCDC2BA2VCK2 349 aa15.11■□□□□ 0.01
FOXA1-201ENST00000250448 OR14I1A6ND48 311 aa15.11■□□□□ 0.01
FOXA1-201ENST00000250448 STMND1H3BQB6 276 aa15.11■□□□□ 0.01
FOXA1-201ENST00000250448 SULT2B1O00204 365 aa15.11■□□□□ 0.01
FOXA1-201ENST00000250448 SLC16A7O60669 478 aa15.11■□□□□ 0.01
FOXA1-201ENST00000250448 ICOSLGO75144 302 aa15.11■□□□□ 0.01
FOXA1-201ENST00000250448 SLC25A12O75746 678 aa15.11■□□□□ 0.01
FOXA1-201ENST00000250448 CD37P11049 281 aa15.11■□□□□ 0.01
FOXA1-201ENST00000250448 ADAM8P78325 824 aa15.11■□□□□ 0.01
FOXA1-201ENST00000250448 C1QL3Q5VWW1 255 aa15.11■□□□□ 0.01
FOXA1-201ENST00000250448 MDGA2Q7Z553 956 aa15.11■□□□□ 0.01
FOXA1-201ENST00000250448 JAGN1Q8N5M9 183 aa15.11■□□□□ 0.01
FOXA1-201ENST00000250448 OR4S1Q8NGB4 309 aa15.11■□□□□ 0.01
FOXA1-201ENST00000250448 FAM117AQ9C073 453 aa15.11■□□□□ 0.01
FOXA1-201ENST00000250448 FAM86C1Q9NVL1 165 aa15.11■□□□□ 0.01
FOXA1-201ENST00000250448 PCDHB10Q9UN67 800 aa15.11■□□□□ 0.01
FOXA1-201ENST00000250448 LRP12Q9Y561 859 aa15.11■□□□□ 0.01
FOXA1-201ENST00000250448 CNOT1A5YKK6 2376 aaKnown RBP15.11■□□□□ 0.01
FOXA1-201ENST00000250448 IGLV1-36A0A0B4J1U3 117 aa15.11■□□□□ 0.01
FOXA1-201ENST00000250448 ZNF354AO60765 605 aaPredicted RBP15.11■□□□□ 0.01
FOXA1-201ENST00000250448 NDUFS6O75380 124 aaKnown RBP15.11■□□□□ 0.01
FOXA1-201ENST00000250448 ATG12O94817 140 aa15.11■□□□□ 0.01
FOXA1-201ENST00000250448 CXCR1P25024 350 aa15.11■□□□□ 0.01
FOXA1-201ENST00000250448 DNASE1L1P49184 302 aa15.11■□□□□ 0.01
FOXA1-201ENST00000250448 INSM1Q01101 510 aaPredicted RBP15.11■□□□□ 0.01
FOXA1-201ENST00000250448 SPOCK1Q08629 439 aa15.11■□□□□ 0.01
FOXA1-201ENST00000250448 EIF2B1Q14232 305 aaKnown RBP15.11■□□□□ 0.01
FOXA1-201ENST00000250448 ACKR1Q16570 336 aa15.11■□□□□ 0.01
FOXA1-201ENST00000250448 C3orf33Q6P1S2 294 aa15.11■□□□□ 0.01
FOXA1-201ENST00000250448 SLC29A4Q7RTT9 530 aa15.11■□□□□ 0.01
FOXA1-201ENST00000250448 SLC25A42Q86VD7 318 aa15.11■□□□□ 0.01
FOXA1-201ENST00000250448 BOLLQ8N9W6 283 aaKnown RBP15.11■□□□□ 0.01
FOXA1-201ENST00000250448 SUMF1Q8NBK3 374 aa15.11■□□□□ 0.01
FOXA1-201ENST00000250448 OR1S2Q8NGQ3 325 aa15.11■□□□□ 0.01
FOXA1-201ENST00000250448 ZNF519Q8TB69 540 aa15.11■□□□□ 0.01
FOXA1-201ENST00000250448 PRRT1Q99946 306 aa15.11■□□□□ 0.01
FOXA1-201ENST00000250448 LAT2Q9GZY6 243 aa15.11■□□□□ 0.01
FOXA1-201ENST00000250448 SAV1Q9H4B6 383 aaPredicted RBP15.11■□□□□ 0.01
FOXA1-201ENST00000250448 ASF1BQ9NVP2 202 aa15.11■□□□□ 0.01
FOXA1-201ENST00000250448 SLC2A8Q9NY64 477 aa15.11■□□□□ 0.01
FOXA1-201ENST00000250448 PLEKHA6Q9Y2H5 1048 aa15.11■□□□□ 0.01
FOXA1-201ENST00000250448 TRAV36DV7A0A075B6V5 113 aa15.1■□□□□ 0.01
FOXA1-201ENST00000250448 FRG2CA6NGY1 282 aa15.1■□□□□ 0.01
FOXA1-201ENST00000250448 MASP2O00187 686 aa15.1■□□□□ 0.01
FOXA1-201ENST00000250448 ZNF806P0C7X5 589 aa15.1■□□□□ 0.01
FOXA1-201ENST00000250448 SELLP14151 372 aa15.1■□□□□ 0.01
FOXA1-201ENST00000250448 HLA-GP17693 338 aa15.1■□□□□ 0.01
FOXA1-201ENST00000250448 RPL27P61353 136 aaKnown RBP15.1■□□□□ 0.01
FOXA1-201ENST00000250448 ZNF117Q03924 483 aa15.1■□□□□ 0.01
FOXA1-201ENST00000250448 PPP1R1AQ13522 171 aa15.1■□□□□ 0.01
FOXA1-201ENST00000250448 TRA2AQ13595 282 aaKnown RBP eCLIP15.1■□□□□ 0.01
FOXA1-201ENST00000250448 APCDD1LQ8NCL9 501 aa15.1■□□□□ 0.01
FOXA1-201ENST00000250448 OR13C3Q8NGS6 347 aa15.1■□□□□ 0.01
FOXA1-201ENST00000250448 RELTQ969Z4 430 aa15.1■□□□□ 0.01
FOXA1-201ENST00000250448 ABHD6Q9BV23 337 aa15.1■□□□□ 0.01
FOXA1-201ENST00000250448 PCNX3Q9H6A9 2034 aa15.1■□□□□ 0.01
FOXA1-201ENST00000250448 MEGF11A6BM72 1044 aa15.1■□□□□ 0.01
FOXA1-201ENST00000250448 VSTM2BA6NLU5 285 aa15.1■□□□□ 0.01
FOXA1-201ENST00000250448 F5H0A9 414 aaPredicted RBP15.1■□□□□ 0.01
FOXA1-201ENST00000250448 BDKRB2P30411 391 aa15.1■□□□□ 0.01
FOXA1-201ENST00000250448 SLC6A8P48029 635 aa15.1■□□□□ 0.01
FOXA1-201ENST00000250448 PLCXD2Q0VAA5 305 aa15.1■□□□□ 0.01
FOXA1-201ENST00000250448 RNASE10Q5GAN6 216 aaKnown RBP15.1■□□□□ 0.01
FOXA1-201ENST00000250448 MAMDC2Q7Z304 686 aaPredicted RBP15.1■□□□□ 0.01
FOXA1-201ENST00000250448 CD163Q86VB7 1156 aa15.1■□□□□ 0.01
FOXA1-201ENST00000250448 ACBD4Q8NC06 268 aa15.1■□□□□ 0.01
FOXA1-201ENST00000250448 SLC25A36Q96CQ1 311 aa15.1■□□□□ 0.01
FOXA1-201ENST00000250448 WDR77Q9BQA1 342 aaPredicted RBP15.1■□□□□ 0.01
FOXA1-201ENST00000250448 CST11Q9H112 138 aa15.1■□□□□ 0.01
FOXA1-201ENST00000250448 PISDQ9UG56 409 aa15.1■□□□□ 0.01
FOXA1-201ENST00000250448 LOXL2Q9Y4K0 774 aa15.1■□□□□ 0.01
FOXA1-201ENST00000250448 KLF2Q9Y5W3 355 aaPredicted RBP15.1■□□□□ 0.01
FOXA1-201ENST00000250448 COL27A1Q8IZC6 1860 aaPredicted RBP15.1■□□□□ 0.01
FOXA1-201ENST00000250448 MUC6Q6W4X9 2439 aa15.1■□□□□ 0.01
FOXA1-201ENST00000250448 RAB19A4D1S5 217 aa15.1■□□□□ 0.01
FOXA1-201ENST00000250448 IL2RAP01589 272 aa15.1■□□□□ 0.01
FOXA1-201ENST00000250448 CTLA4P16410 223 aa15.1■□□□□ 0.01
FOXA1-201ENST00000250448 PRKXP51817 358 aa15.1■□□□□ 0.01
FOXA1-201ENST00000250448 CDNFQ49AH0 187 aa15.1■□□□□ 0.01
FOXA1-201ENST00000250448 THAP6Q8TBB0 222 aa15.1■□□□□ 0.01
FOXA1-201ENST00000250448 TSNAXQ99598 290 aaKnown RBP15.1■□□□□ 0.01
FOXA1-201ENST00000250448 TMEM9BQ9NQ34 198 aa15.1■□□□□ 0.01
FOXA1-201ENST00000250448 OR2AT4A6NND4 320 aa15.09■□□□□ 0.01
FOXA1-201ENST00000250448 ABCD3P28288 659 aa15.09■□□□□ 0.01
FOXA1-201ENST00000250448 IL12BP29460 328 aa15.09■□□□□ 0.01
FOXA1-201ENST00000250448 CXADRP78310 365 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms