RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 A0A0D9SG52 128 aa11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 SULT1C2O00338 296 aa11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 UBBP0CG47 229 aa11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 OR3A4PP47883 348 aa11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 RPS27AP62979 156 aaKnown RBP11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 UBA52P62987 128 aaKnown RBP11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 AIMP2Q13155 320 aaKnown RBP11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 RNF144BQ7Z419 303 aa11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 MISPQ8IVT2 679 aa11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 OR13C8Q8NGS7 320 aa11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 ST7LQ8TDW4 575 aa11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 ZNF501Q96CX3 271 aaPredicted RBP11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 CHMP1AQ9HD42 196 aaPredicted RBP11.22□□□□□ -0.61
RAB3IP-201ENST00000247833 LOC105371267A0A1B0GV96 52 aa11.21□□□□□ -0.61
RAB3IP-201ENST00000247833 RAB27BO00194 218 aa11.21□□□□□ -0.61
RAB3IP-201ENST00000247833 SOCS1O15524 211 aa11.21□□□□□ -0.61
RAB3IP-201ENST00000247833 NPIPB7O75200 414 aa11.21□□□□□ -0.61
RAB3IP-201ENST00000247833 B3GALNT1O75752 331 aa11.21□□□□□ -0.61
RAB3IP-201ENST00000247833 ZFAND5O76080 213 aa11.21□□□□□ -0.61
RAB3IP-201ENST00000247833 AKR1D1P51857 326 aa11.21□□□□□ -0.61
RAB3IP-201ENST00000247833 C5orf46Q6UWT4 87 aa11.21□□□□□ -0.61
RAB3IP-201ENST00000247833 ANKRD37Q7Z713 158 aa11.21□□□□□ -0.61
RAB3IP-201ENST00000247833 LYG2Q86SG7 212 aa11.21□□□□□ -0.61
RAB3IP-201ENST00000247833 WDFY1Q8IWB7 410 aa11.21□□□□□ -0.61
RAB3IP-201ENST00000247833 GTPBP8Q8N3Z3 284 aaPredicted RBP11.21□□□□□ -0.61
RAB3IP-201ENST00000247833 TMEM104Q8NE00 496 aa11.21□□□□□ -0.61
RAB3IP-201ENST00000247833 OR5M9Q8NGP3 310 aa11.21□□□□□ -0.61
RAB3IP-201ENST00000247833 OR5M8Q8NGP6 311 aa11.21□□□□□ -0.61
RAB3IP-201ENST00000247833 PIGTQ969N2 578 aa11.21□□□□□ -0.61
RAB3IP-201ENST00000247833 CPNE2Q96FN4 548 aaPredicted RBP11.21□□□□□ -0.61
RAB3IP-201ENST00000247833 TSNAXQ99598 290 aaKnown RBP11.21□□□□□ -0.61
RAB3IP-201ENST00000247833 ZNF160Q9HCG1 818 aa11.21□□□□□ -0.61
RAB3IP-201ENST00000247833 TREM1Q9NP99 234 aa11.21□□□□□ -0.61
RAB3IP-201ENST00000247833 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.21□□□□□ -0.61
RAB3IP-201ENST00000247833 OR6C76A6NM76 312 aa11.21□□□□□ -0.61
RAB3IP-201ENST00000247833 ATP6V1G2-DDX39BF2Z307 99 aa11.21□□□□□ -0.61
RAB3IP-201ENST00000247833 SCGB1D2O95969 90 aa11.21□□□□□ -0.61
RAB3IP-201ENST00000247833 CX3CR1P49238 355 aa11.21□□□□□ -0.61
RAB3IP-201ENST00000247833 DCDP81605 110 aaKnown RBP11.21□□□□□ -0.61
RAB3IP-201ENST00000247833 C11orf87Q6NUJ2 197 aa11.21□□□□□ -0.61
RAB3IP-201ENST00000247833 FDX2Q6P4F2 183 aa11.21□□□□□ -0.61
RAB3IP-201ENST00000247833 GUSBP11Q6P575 273 aa11.21□□□□□ -0.61
RAB3IP-201ENST00000247833 TMEM156Q8N614 296 aa11.21□□□□□ -0.61
RAB3IP-201ENST00000247833 SLC25A28Q96A46 364 aa11.21□□□□□ -0.61
RAB3IP-201ENST00000247833 ALKBH4Q9NXW9 302 aa11.21□□□□□ -0.61
RAB3IP-201ENST00000247833 B3GALT5Q9Y2C3 310 aa11.21□□□□□ -0.61
RAB3IP-201ENST00000247833 CSAG2Q9Y5P2 127 aa11.21□□□□□ -0.61
RAB3IP-201ENST00000247833 KCNMB2Q9Y691 235 aa11.21□□□□□ -0.61
RAB3IP-201ENST00000247833 H3BUI4 141 aa11.21□□□□□ -0.62
RAB3IP-201ENST00000247833 GABRR1P24046 479 aa11.21□□□□□ -0.62
RAB3IP-201ENST00000247833 CLDN6P56747 220 aa11.21□□□□□ -0.62
RAB3IP-201ENST00000247833 ACY1Q03154 408 aa11.21□□□□□ -0.62
RAB3IP-201ENST00000247833 OR10R2Q8NGX6 335 aa11.21□□□□□ -0.62
RAB3IP-201ENST00000247833 LIN37Q96GY3 246 aaPredicted RBP11.21□□□□□ -0.62
RAB3IP-201ENST00000247833 KCNK17Q96T54 332 aa11.21□□□□□ -0.62
RAB3IP-201ENST00000247833 URM1Q9BTM9 101 aaKnown RBP11.21□□□□□ -0.62
RAB3IP-201ENST00000247833 KCNK7Q9Y2U2 307 aa11.21□□□□□ -0.62
RAB3IP-201ENST00000247833 C9orf170A2RU37 121 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 MFSD2BA6NFX1 497 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 LIPT2A6NK58 231 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 GLULP15104 373 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 MGMTP16455 207 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 RNF133Q8WVZ7 376 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 UCK1Q9HA47 277 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 EHFQ9NZC4 300 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 AGPAT2O15120 278 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 TO15178 435 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 RAMP1O60894 148 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 SNAPC5O75971 98 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 IGLV3-19P01714 112 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 RPA2P15927 270 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 BLVRBP30043 206 aaPredicted RBP11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 LY6G6FQ5SQ64 297 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 CCDC36Q8IYA8 594 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 SLC22A8Q8TCC7 542 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 MR1Q95460 341 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 MTCH2Q9Y6C9 303 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 TRAV14DV4A0A0A6YYC5 116 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 SHISA7A6NL88 538 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 FTCDNL1E5RQL4 147 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 NPIPA2E9PIF3 369 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 NPIPA3F8WFD2 350 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 STMND1H3BQB6 276 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 ADAP1O75689 374 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 GLI4P10075 376 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 KLK2P20151 261 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 SSBP1Q04837 148 aaKnown RBP11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 UNC119Q13432 240 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 CHRFAM7AQ494W8 412 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 LCN10Q6JVE6 187 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 PEG10Q86TG7 708 aaKnown RBP11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 TMEM17Q86X19 198 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 APCDD1LQ8NCL9 501 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 BVESQ8NE79 360 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 OR1S1Q8NH92 325 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 TMED6Q8WW62 240 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 LRRC46Q96FV0 321 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 ARHGAP5-AS1Q96IT6 56 aa11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 PHF7Q9BWX1 381 aaPredicted RBP11.2□□□□□ -0.62
RAB3IP-201ENST00000247833 TMEM231Q9H6L2 316 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms