RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 INSIG2Q9Y5U4 225 aa11.61□□□□□ -0.55
DDX39A-201ENST00000242776 C5orf49A4QMS7 147 aa11.6□□□□□ -0.55
DDX39A-201ENST00000242776 PRR23D1E9PI22 279 aaPredicted RBP11.6□□□□□ -0.55
DDX39A-201ENST00000242776 HOXA3O43365 443 aaPredicted RBP11.6□□□□□ -0.55
DDX39A-201ENST00000242776 PTHP01270 115 aa11.6□□□□□ -0.55
DDX39A-201ENST00000242776 IGHV2-70P01814 119 aa11.6□□□□□ -0.55
DDX39A-201ENST00000242776 PRR23D2P0DMB1 279 aaPredicted RBP11.6□□□□□ -0.55
DDX39A-201ENST00000242776 CDAP32320 146 aa11.6□□□□□ -0.55
DDX39A-201ENST00000242776 WNT5AP41221 380 aa11.6□□□□□ -0.55
DDX39A-201ENST00000242776 FAM209AQ5JX71 171 aa11.6□□□□□ -0.55
DDX39A-201ENST00000242776 ZNF691Q5VV52 312 aa11.6□□□□□ -0.55
DDX39A-201ENST00000242776 C16orf87Q6PH81 154 aa11.6□□□□□ -0.55
DDX39A-201ENST00000242776 PTCHD4Q6ZW05 846 aa11.6□□□□□ -0.55
DDX39A-201ENST00000242776 C8orf59Q8N0T1 100 aaPredicted RBP11.6□□□□□ -0.55
DDX39A-201ENST00000242776 SLC37A3Q8NCC5 494 aa11.6□□□□□ -0.55
DDX39A-201ENST00000242776 OR8J1Q8NGP2 316 aa11.6□□□□□ -0.55
DDX39A-201ENST00000242776 AKR7LQ8NHP1 331 aa11.6□□□□□ -0.55
DDX39A-201ENST00000242776 TMEM163Q8TC26 289 aa11.6□□□□□ -0.55
DDX39A-201ENST00000242776 TFAP2CQ92754 450 aa11.6□□□□□ -0.55
DDX39A-201ENST00000242776 HDAC2Q92769 488 aaKnown RBP11.6□□□□□ -0.55
DDX39A-201ENST00000242776 NMNAT3Q96T66 252 aa11.6□□□□□ -0.55
DDX39A-201ENST00000242776 C1orf198Q9H425 327 aa11.6□□□□□ -0.55
DDX39A-201ENST00000242776 CCNB1IP1Q9NPC3 277 aa11.6□□□□□ -0.55
DDX39A-201ENST00000242776 VSX1Q9NZR4 365 aaPredicted RBP11.6□□□□□ -0.55
DDX39A-201ENST00000242776 HSPE1-MOB4S4R3N1 261 aa11.6□□□□□ -0.55
DDX39A-201ENST00000242776 DOCK11Q5JSL3 2073 aa11.59□□□□□ -0.55
DDX39A-201ENST00000242776 TRAV40A0A0B4J280 105 aa11.59□□□□□ -0.55
DDX39A-201ENST00000242776 H7C1C5 153 aa11.59□□□□□ -0.55
DDX39A-201ENST00000242776 SLC2A10O95528 541 aa11.59□□□□□ -0.55
DDX39A-201ENST00000242776 STOMP27105 288 aa11.59□□□□□ -0.55
DDX39A-201ENST00000242776 CRABP1P29762 137 aa11.59□□□□□ -0.55
DDX39A-201ENST00000242776 CDKN2AP42771 156 aaKnown RBP11.59□□□□□ -0.55
DDX39A-201ENST00000242776 MTNR1AP48039 350 aa11.59□□□□□ -0.55
DDX39A-201ENST00000242776 LCN6P62502 163 aa11.59□□□□□ -0.55
DDX39A-201ENST00000242776 TNFAIP6P98066 277 aaPredicted RBP11.59□□□□□ -0.55
DDX39A-201ENST00000242776 IL5RAQ01344 420 aa11.59□□□□□ -0.55
DDX39A-201ENST00000242776 CRMP1Q14194 572 aa11.59□□□□□ -0.55
DDX39A-201ENST00000242776 TUSC1Q2TAM9 212 aa11.59□□□□□ -0.55
DDX39A-201ENST00000242776 KLHL36Q8N4N3 616 aa11.59□□□□□ -0.55
DDX39A-201ENST00000242776 TCEANCQ8N8B7 351 aa11.59□□□□□ -0.55
DDX39A-201ENST00000242776 NPEPL1Q8NDH3 523 aa11.59□□□□□ -0.55
DDX39A-201ENST00000242776 ABHD4Q8TB40 342 aa11.59□□□□□ -0.55
DDX39A-201ENST00000242776 KLF14Q8TD94 323 aaPredicted RBP11.59□□□□□ -0.55
DDX39A-201ENST00000242776 WFDC12Q8WWY7 111 aa11.59□□□□□ -0.55
DDX39A-201ENST00000242776 MCHR2Q969V1 340 aa11.59□□□□□ -0.55
DDX39A-201ENST00000242776 ZDHHC16Q969W1 377 aa11.59□□□□□ -0.55
DDX39A-201ENST00000242776 OTULINQ96BN8 352 aa11.59□□□□□ -0.55
DDX39A-201ENST00000242776 DIRC2Q96SL1 478 aa11.59□□□□□ -0.55
DDX39A-201ENST00000242776 MRPL13Q9BYD1 178 aaKnown RBP11.59□□□□□ -0.55
DDX39A-201ENST00000242776 PATZ1Q9HBE1 687 aaKnown RBP11.59□□□□□ -0.55
DDX39A-201ENST00000242776 EIF3KQ9UBQ5 218 aaKnown RBP11.59□□□□□ -0.55
DDX39A-201ENST00000242776 PPIAL4EA0A075B759 164 aa11.58□□□□□ -0.56
DDX39A-201ENST00000242776 PPIAL4CA0A0B4J2A2 164 aa11.58□□□□□ -0.56
DDX39A-201ENST00000242776 FAM181BA6NEQ2 426 aa11.58□□□□□ -0.56
DDX39A-201ENST00000242776 PPIAL4DF5H284 164 aa11.58□□□□□ -0.56
DDX39A-201ENST00000242776 PRKYO43930 277 aa11.58□□□□□ -0.56
DDX39A-201ENST00000242776 ZNF205O95201 554 aa11.58□□□□□ -0.56
DDX39A-201ENST00000242776 CRYBA1P05813 215 aa11.58□□□□□ -0.56
DDX39A-201ENST00000242776 MMP7P09237 267 aaPredicted RBP11.58□□□□□ -0.56
DDX39A-201ENST00000242776 PPIAL4FP0DN26 164 aa11.58□□□□□ -0.56
DDX39A-201ENST00000242776 CD80P33681 288 aa11.58□□□□□ -0.56
DDX39A-201ENST00000242776 SLC6A9P48067 706 aa11.58□□□□□ -0.56
DDX39A-201ENST00000242776 ZNF84P51523 738 aa11.58□□□□□ -0.56
DDX39A-201ENST00000242776 BRD3OSQ6XYD6 125 aa11.58□□□□□ -0.56
DDX39A-201ENST00000242776 RFPL4BQ6ZWI9 263 aa11.58□□□□□ -0.56
DDX39A-201ENST00000242776 GID4Q8IVV7 300 aa11.58□□□□□ -0.56
DDX39A-201ENST00000242776 SPICQ8N5J4 248 aa11.58□□□□□ -0.56
DDX39A-201ENST00000242776 OR2T4Q8NH00 348 aa11.58□□□□□ -0.56
DDX39A-201ENST00000242776 UBE2FQ969M7 185 aa11.58□□□□□ -0.56
DDX39A-201ENST00000242776 MARS2Q96GW9 593 aaKnown RBP11.58□□□□□ -0.56
DDX39A-201ENST00000242776 ANKRD60Q9BZ19 345 aa11.58□□□□□ -0.56
DDX39A-201ENST00000242776 SYT4Q9H2B2 425 aa11.58□□□□□ -0.56
DDX39A-201ENST00000242776 KCNN2Q9H2S1 579 aa11.58□□□□□ -0.56
DDX39A-201ENST00000242776 MARCH7Q9H992 704 aa11.58□□□□□ -0.56
DDX39A-201ENST00000242776 RPRD1BQ9NQG5 326 aaKnown RBP11.58□□□□□ -0.56
DDX39A-201ENST00000242776 TMEM106BQ9NUM4 274 aa11.58□□□□□ -0.56
DDX39A-201ENST00000242776 H2AFY2Q9P0M6 372 aaPredicted RBP11.58□□□□□ -0.56
DDX39A-201ENST00000242776 OR5V1Q9UGF6 321 aa11.58□□□□□ -0.56
DDX39A-201ENST00000242776 LOC100509620A0A075B734 347 aa11.57□□□□□ -0.56
DDX39A-201ENST00000242776 OR6C68A6NDL8 312 aa11.57□□□□□ -0.56
DDX39A-201ENST00000242776 SNTNA6NMZ2 147 aa11.57□□□□□ -0.56
DDX39A-201ENST00000242776 M0R129 80 aa11.57□□□□□ -0.56
DDX39A-201ENST00000242776 TIMM8AO60220 97 aaPredicted RBP11.57□□□□□ -0.56
DDX39A-201ENST00000242776 ZNF32P17041 273 aa11.57□□□□□ -0.56
DDX39A-201ENST00000242776 GDI2P50395 445 aaKnown RBP11.57□□□□□ -0.56
DDX39A-201ENST00000242776 SLC25A1P53007 311 aa11.57□□□□□ -0.56
DDX39A-201ENST00000242776 RAG2P55895 527 aa11.57□□□□□ -0.56
DDX39A-201ENST00000242776 SNRPGP62308 76 aaKnown RBP11.57□□□□□ -0.56
DDX39A-201ENST00000242776 ZMYND11Q15326 602 aa11.57□□□□□ -0.56
DDX39A-201ENST00000242776 SGCAQ16586 387 aa11.57□□□□□ -0.56
DDX39A-201ENST00000242776 HIST3H3Q16695 136 aa11.57□□□□□ -0.56
DDX39A-201ENST00000242776 DEFB112Q30KQ8 113 aa11.57□□□□□ -0.56
DDX39A-201ENST00000242776 ESCO2Q56NI9 601 aa11.57□□□□□ -0.56
DDX39A-201ENST00000242776 LCN1P1Q5VSP4 162 aa11.57□□□□□ -0.56
DDX39A-201ENST00000242776 MEDAGQ5VYS4 303 aa11.57□□□□□ -0.56
DDX39A-201ENST00000242776 FIP1L1Q6UN15 594 aaKnown RBP11.57□□□□□ -0.56
DDX39A-201ENST00000242776 ENTHD1Q8IYW4 607 aa11.57□□□□□ -0.56
DDX39A-201ENST00000242776 CYB561A3Q8NBI2 242 aa11.57□□□□□ -0.56
DDX39A-201ENST00000242776 NSMAFQ92636 917 aa11.57□□□□□ -0.56
DDX39A-201ENST00000242776 Q96MT0 163 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms