RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 INTS12Q96CB8 462 aaKnown RBP14.28□□□□□ -0.12
UBE3D-201ENST00000237186 GAL3ST1Q99999 423 aa14.28□□□□□ -0.12
UBE3D-201ENST00000237186 DPCDQ9BVM2 203 aaPredicted RBP14.28□□□□□ -0.12
UBE3D-201ENST00000237186 ZNF416Q9BWM5 594 aa14.28□□□□□ -0.12
UBE3D-201ENST00000237186 CHST6Q9GZX3 395 aa14.28□□□□□ -0.12
UBE3D-201ENST00000237186 NELFAQ9H3P2 528 aa14.28□□□□□ -0.12
UBE3D-201ENST00000237186 ZMAT3Q9HA38 289 aaKnown RBP14.28□□□□□ -0.12
UBE3D-201ENST00000237186 ZNF160Q9HCG1 818 aa14.28□□□□□ -0.12
UBE3D-201ENST00000237186 GPR84Q9NQS5 396 aa14.28□□□□□ -0.12
UBE3D-201ENST00000237186 TMEM82A0PJX8 343 aa14.27□□□□□ -0.12
UBE3D-201ENST00000237186 OR14I1A6ND48 311 aa14.27□□□□□ -0.12
UBE3D-201ENST00000237186 TMEM235A6NFC5 223 aa14.27□□□□□ -0.12
UBE3D-201ENST00000237186 OR6C65A6NJZ3 312 aa14.27□□□□□ -0.12
UBE3D-201ENST00000237186 MCRIP1C9JLW8 97 aa14.27□□□□□ -0.12
UBE3D-201ENST00000237186 AMY2AP04746 511 aa14.27□□□□□ -0.12
UBE3D-201ENST00000237186 ICAM2P13598 275 aa14.27□□□□□ -0.12
UBE3D-201ENST00000237186 ABOP16442 354 aa14.27□□□□□ -0.12
UBE3D-201ENST00000237186 GUCA1AP43080 201 aaPredicted RBP14.27□□□□□ -0.12
UBE3D-201ENST00000237186 CX3CR1P49238 355 aa14.27□□□□□ -0.12
UBE3D-201ENST00000237186 H2BFSP57053 126 aa14.27□□□□□ -0.12
UBE3D-201ENST00000237186 CHAF1BQ13112 559 aa14.27□□□□□ -0.12
UBE3D-201ENST00000237186 RAET1LQ5VY80 246 aa14.27□□□□□ -0.12
UBE3D-201ENST00000237186 ABHD12BQ7Z5M8 362 aaPredicted RBP14.27□□□□□ -0.12
UBE3D-201ENST00000237186 ZNF584Q8IVC4 421 aa14.27□□□□□ -0.12
UBE3D-201ENST00000237186 GJC3Q8NFK1 279 aa14.27□□□□□ -0.12
UBE3D-201ENST00000237186 SSC4DQ8WTU2 575 aa14.27□□□□□ -0.12
UBE3D-201ENST00000237186 PIGQQ9BRB3 760 aa14.27□□□□□ -0.12
UBE3D-201ENST00000237186 M0R233 179 aa14.27□□□□□ -0.13
UBE3D-201ENST00000237186 OR4E1P0C645 316 aa14.27□□□□□ -0.13
UBE3D-201ENST00000237186 NFYAP23511 347 aaPredicted RBP14.27□□□□□ -0.13
UBE3D-201ENST00000237186 C2orf68Q2NKX9 166 aa14.27□□□□□ -0.13
UBE3D-201ENST00000237186 ESCO2Q56NI9 601 aa14.27□□□□□ -0.13
UBE3D-201ENST00000237186 CLLU1Q5K131 121 aa14.27□□□□□ -0.13
UBE3D-201ENST00000237186 Q6ZSR3 168 aa14.27□□□□□ -0.13
UBE3D-201ENST00000237186 FJX1Q86VR8 437 aa14.27□□□□□ -0.13
UBE3D-201ENST00000237186 BPIFB2Q8N4F0 458 aa14.27□□□□□ -0.13
UBE3D-201ENST00000237186 OR9K2Q8NGE7 335 aa14.27□□□□□ -0.13
UBE3D-201ENST00000237186 OR13C8Q8NGS7 320 aa14.27□□□□□ -0.13
UBE3D-201ENST00000237186 OR14K1Q8NGZ2 314 aa14.27□□□□□ -0.13
UBE3D-201ENST00000237186 C1orf147Q96MC9 270 aaPredicted RBP14.27□□□□□ -0.13
UBE3D-201ENST00000237186 POFUT1Q9H488 388 aa14.27□□□□□ -0.13
UBE3D-201ENST00000237186 FOXD3Q9UJU5 478 aaPredicted RBP14.27□□□□□ -0.13
UBE3D-201ENST00000237186 DKKL1Q9UK85 242 aa14.27□□□□□ -0.13
UBE3D-201ENST00000237186 GJE1A6NN92 205 aa14.26□□□□□ -0.13
UBE3D-201ENST00000237186 LEUTXA8MZ59 168 aa14.26□□□□□ -0.13
UBE3D-201ENST00000237186 DISC1C4P0D8 188 aa14.26□□□□□ -0.13
UBE3D-201ENST00000237186 NPIPA2E9PIF3 369 aa14.26□□□□□ -0.13
UBE3D-201ENST00000237186 NPIPA3F8WFD2 350 aa14.26□□□□□ -0.13
UBE3D-201ENST00000237186 M0QYG6 137 aa14.26□□□□□ -0.13
UBE3D-201ENST00000237186 CXCL2P19875 107 aa14.26□□□□□ -0.13
UBE3D-201ENST00000237186 OTX1P32242 354 aaPredicted RBP14.26□□□□□ -0.13
UBE3D-201ENST00000237186 EXOSC2Q13868 293 aaKnown RBP14.26□□□□□ -0.13
UBE3D-201ENST00000237186 ENDOGQ14249 297 aaKnown RBP14.26□□□□□ -0.13
UBE3D-201ENST00000237186 OPCMLQ14982 345 aa14.26□□□□□ -0.13
UBE3D-201ENST00000237186 LPAL2Q16609 132 aa14.26□□□□□ -0.13
UBE3D-201ENST00000237186 C4orf46Q504U0 113 aa14.26□□□□□ -0.13
UBE3D-201ENST00000237186 PHYHD1Q5SRE7 291 aa14.26□□□□□ -0.13
UBE3D-201ENST00000237186 ZNF283Q8N7M2 679 aa14.26□□□□□ -0.13
UBE3D-201ENST00000237186 ZIC4Q8N9L1 334 aa14.26□□□□□ -0.13
UBE3D-201ENST00000237186 OR10R2Q8NGX6 335 aa14.26□□□□□ -0.13
UBE3D-201ENST00000237186 NABP1Q96AH0 204 aa14.26□□□□□ -0.13
UBE3D-201ENST00000237186 WDR89Q96FK6 387 aaPredicted RBP14.26□□□□□ -0.13
UBE3D-201ENST00000237186 ZNF385AQ96PM9 386 aaKnown RBP14.26□□□□□ -0.13
UBE3D-201ENST00000237186 SLC6A7Q99884 636 aa14.26□□□□□ -0.13
UBE3D-201ENST00000237186 PRRT1Q99946 306 aa14.26□□□□□ -0.13
UBE3D-201ENST00000237186 SOX7Q9BT81 388 aa14.26□□□□□ -0.13
UBE3D-201ENST00000237186 SF3B5Q9BWJ5 86 aaKnown RBP14.26□□□□□ -0.13
UBE3D-201ENST00000237186 UBQLN2Q9UHD9 624 aa14.26□□□□□ -0.13
UBE3D-201ENST00000237186 A0A0J9YW62 118 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 A0A0U1RQV5 110 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 RPS10-NUDT3A0A1W2PQS6 291 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 F5H5P2 479 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 DHHO43323 396 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 FCER2P06734 321 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 ZNF883P0CG24 379 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 SLC2A1P11166 492 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 TBPP20226 339 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 B3GALT5-AS1P59052 145 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 SEC61A1P61619 476 aaKnown RBP14.25□□□□□ -0.13
UBE3D-201ENST00000237186 FAM189A2Q15884 450 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 SGCAQ16586 387 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 DCAF12Q5T6F0 453 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 ATPAF1Q5TC12 328 aaPredicted RBP14.25□□□□□ -0.13
UBE3D-201ENST00000237186 ZNF468Q5VIY5 522 aaPredicted RBP14.25□□□□□ -0.13
UBE3D-201ENST00000237186 AWAT2Q6E213 333 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 H3F3CQ6NXT2 135 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 FAM57BQ71RH2 274 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 PPP1R32Q7Z5V6 425 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 OR8H3Q8N146 312 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 KCNG3Q8TAE7 436 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 TNFAIP8L1Q8WVP5 186 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 LPAR5Q9H1C0 372 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 PADI1Q9ULC6 663 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 TUBAL3A6NHL2 446 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 UBBP0CG47 229 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 PRF1P14222 555 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 ANOS1P23352 680 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 SRD5A2P31213 254 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 RAC3P60763 192 aa14.25□□□□□ -0.13
UBE3D-201ENST00000237186 CLVS2Q5SYC1 327 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms