RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 NME1P15531 152 aaKnown RBP12.1□□□□□ -0.47
NEK4-201ENST00000233027 FABP6P51161 128 aa12.1□□□□□ -0.47
NEK4-201ENST00000233027 RRADP55042 308 aa12.1□□□□□ -0.47
NEK4-201ENST00000233027 ZNF90Q03938 601 aa12.1□□□□□ -0.47
NEK4-201ENST00000233027 C12orf73Q69YU5 71 aa12.1□□□□□ -0.47
NEK4-201ENST00000233027 ZNF787Q6DD87 383 aa12.1□□□□□ -0.47
NEK4-201ENST00000233027 PTCRAQ6ISU1 281 aaPredicted RBP12.1□□□□□ -0.47
NEK4-201ENST00000233027 OR2A1Q8NGT9 310 aa12.1□□□□□ -0.47
NEK4-201ENST00000233027 C2orf50Q96LR7 162 aa12.1□□□□□ -0.47
NEK4-201ENST00000233027 RIMS4Q9H426 269 aaPredicted RBP12.1□□□□□ -0.47
NEK4-201ENST00000233027 CLCF1Q9UBD9 225 aa12.1□□□□□ -0.47
NEK4-201ENST00000233027 GHRLQ9UBU3 117 aa12.1□□□□□ -0.47
NEK4-201ENST00000233027 NUDT19A8MXV4 375 aa12.1□□□□□ -0.47
NEK4-201ENST00000233027 H7BYZ3 331 aa12.1□□□□□ -0.47
NEK4-201ENST00000233027 TO15178 435 aa12.1□□□□□ -0.47
NEK4-201ENST00000233027 FZD6O60353 706 aa12.1□□□□□ -0.47
NEK4-201ENST00000233027 GFERP55789 205 aa12.1□□□□□ -0.47
NEK4-201ENST00000233027 SKA3Q8IX90 412 aa12.1□□□□□ -0.47
NEK4-201ENST00000233027 NEURL2Q9BR09 285 aa12.1□□□□□ -0.47
NEK4-201ENST00000233027 KCNIP2Q9NS61 270 aa12.1□□□□□ -0.47
NEK4-201ENST00000233027 GDF2Q9UK05 429 aaPredicted RBP12.1□□□□□ -0.47
NEK4-201ENST00000233027 SHISA8B8ZZ34 492 aa12.1□□□□□ -0.47
NEK4-201ENST00000233027 E5RGE8 158 aa12.1□□□□□ -0.47
NEK4-201ENST00000233027 BCL2L11O43521 198 aa12.1□□□□□ -0.47
NEK4-201ENST00000233027 NTF3P20783 257 aa12.1□□□□□ -0.47
NEK4-201ENST00000233027 RFC3P40938 356 aa12.1□□□□□ -0.47
NEK4-201ENST00000233027 EXD3Q8N9H8 876 aa12.1□□□□□ -0.47
NEK4-201ENST00000233027 TMEM104Q8NE00 496 aa12.1□□□□□ -0.47
NEK4-201ENST00000233027 ZNF576Q9H609 170 aa12.1□□□□□ -0.47
NEK4-201ENST00000233027 KCND3Q9UK17 655 aa12.1□□□□□ -0.47
NEK4-201ENST00000233027 NSG2Q9Y328 171 aa12.1□□□□□ -0.47
NEK4-201ENST00000233027 STRAPQ9Y3F4 350 aaKnown RBP12.1□□□□□ -0.47
NEK4-201ENST00000233027 UBE2G1P62253 170 aa12.1□□□□□ -0.47
NEK4-201ENST00000233027 MAP6Q96JE9 813 aa12.1□□□□□ -0.47
NEK4-201ENST00000233027 COL22A1Q8NFW1 1626 aaPredicted RBP12.1□□□□□ -0.47
NEK4-201ENST00000233027 SH2D1BO14796 132 aa12.1□□□□□ -0.47
NEK4-201ENST00000233027 CPN1P15169 458 aa12.1□□□□□ -0.47
NEK4-201ENST00000233027 TGM1P22735 817 aa12.1□□□□□ -0.47
NEK4-201ENST00000233027 C12orf57Q99622 126 aa12.1□□□□□ -0.47
NEK4-201ENST00000233027 NGBQ9NPG2 151 aa12.1□□□□□ -0.47
NEK4-201ENST00000233027 PLRG1O43660 514 aaKnown RBP12.09□□□□□ -0.47
NEK4-201ENST00000233027 PRR35P0CG20 571 aa12.09□□□□□ -0.47
NEK4-201ENST00000233027 BAP18Q8IXM2 172 aa12.09□□□□□ -0.47
NEK4-201ENST00000233027 ZNF687Q8N1G0 1237 aa12.09□□□□□ -0.47
NEK4-201ENST00000233027 BPIFCQ8NFQ6 507 aa12.09□□□□□ -0.47
NEK4-201ENST00000233027 OR13D1Q8NGV5 346 aa12.09□□□□□ -0.47
NEK4-201ENST00000233027 AKR1E2Q96JD6 320 aa12.09□□□□□ -0.47
NEK4-201ENST00000233027 OXGR1Q96P68 337 aa12.09□□□□□ -0.47
NEK4-201ENST00000233027 CRLF2Q9HC73 371 aa12.09□□□□□ -0.47
NEK4-201ENST00000233027 PSENENQ9NZ42 101 aa12.09□□□□□ -0.47
NEK4-201ENST00000233027 SSC5DA1L4H1 1573 aa12.09□□□□□ -0.47
NEK4-201ENST00000233027 WNT1P04628 370 aa12.09□□□□□ -0.47
NEK4-201ENST00000233027 CEACAM5P06731 702 aa12.09□□□□□ -0.47
NEK4-201ENST00000233027 OR5H8P0DN80 308 aa12.09□□□□□ -0.47
NEK4-201ENST00000233027 AVPR2P30518 371 aa12.09□□□□□ -0.47
NEK4-201ENST00000233027 BTNL8Q6UX41 500 aa12.09□□□□□ -0.47
NEK4-201ENST00000233027 SMIM4Q8WVI0 70 aa12.09□□□□□ -0.47
NEK4-201ENST00000233027 FOXQ1Q9C009 403 aa12.09□□□□□ -0.47
NEK4-201ENST00000233027 RYDENQ9NUL5 291 aaKnown RBP12.09□□□□□ -0.47
NEK4-201ENST00000233027 B9D1Q9UPM9 204 aa12.09□□□□□ -0.47
NEK4-201ENST00000233027 TRAV1-2A0A0B4J238 106 aa12.09□□□□□ -0.47
NEK4-201ENST00000233027 BTBD17A6NE02 478 aa12.09□□□□□ -0.47
NEK4-201ENST00000233027 PDGFBP01127 241 aaPredicted RBP12.09□□□□□ -0.47
NEK4-201ENST00000233027 ASCL1P50553 236 aa12.09□□□□□ -0.47
NEK4-201ENST00000233027 UBE2G2P60604 165 aa12.09□□□□□ -0.47
NEK4-201ENST00000233027 RPL11P62913 178 aaKnown RBP12.09□□□□□ -0.47
NEK4-201ENST00000233027 ARL16Q0P5N6 197 aa12.09□□□□□ -0.47
NEK4-201ENST00000233027 ZBTB37Q5TC79 503 aa12.09□□□□□ -0.47
NEK4-201ENST00000233027 C6orf15Q6UXA7 325 aaPredicted RBP12.09□□□□□ -0.47
NEK4-201ENST00000233027 KTI12Q96EK9 354 aaPredicted RBP12.09□□□□□ -0.47
NEK4-201ENST00000233027 ARHGDIGQ99819 225 aa12.09□□□□□ -0.47
NEK4-201ENST00000233027 MRPS2Q9Y399 296 aaKnown RBP12.09□□□□□ -0.47
NEK4-201ENST00000233027 HAAOP46952 286 aa12.09□□□□□ -0.47
NEK4-201ENST00000233027 GPR12P47775 334 aa12.09□□□□□ -0.47
NEK4-201ENST00000233027 DND1Q8IYX4 353 aaKnown RBP12.09□□□□□ -0.47
NEK4-201ENST00000233027 GNPNAT1Q96EK6 184 aaPredicted RBP12.09□□□□□ -0.47
NEK4-201ENST00000233027 SLC35D1Q9NTN3 355 aa12.09□□□□□ -0.47
NEK4-201ENST00000233027 RNF150Q9ULK6 438 aa12.09□□□□□ -0.47
NEK4-201ENST00000233027 MEIKINA0A087WXM9 373 aa12.08□□□□□ -0.47
NEK4-201ENST00000233027 AQP8O94778 261 aa12.08□□□□□ -0.47
NEK4-201ENST00000233027 CTXN2P0C2S0 81 aa12.08□□□□□ -0.47
NEK4-201ENST00000233027 S100A7P31151 101 aa12.08□□□□□ -0.47
NEK4-201ENST00000233027 CRYBB2P43320 205 aa12.08□□□□□ -0.47
NEK4-201ENST00000233027 FOXF1Q12946 379 aa12.08□□□□□ -0.47
NEK4-201ENST00000233027 SERTM2A0A1B0GWG4 89 aa12.08□□□□□ -0.48
NEK4-201ENST00000233027 PEX11BO96011 259 aa12.08□□□□□ -0.48
NEK4-201ENST00000233027 SLC25A6P12236 298 aa12.08□□□□□ -0.48
NEK4-201ENST00000233027 IL3RAP26951 378 aa12.08□□□□□ -0.48
NEK4-201ENST00000233027 ALKBH6Q3KRA9 238 aa12.08□□□□□ -0.48
NEK4-201ENST00000233027 MORN4Q8NDC4 146 aa12.08□□□□□ -0.48
NEK4-201ENST00000233027 SOX7Q9BT81 388 aa12.08□□□□□ -0.48
NEK4-201ENST00000233027 OR51I2Q9H344 312 aa12.08□□□□□ -0.48
NEK4-201ENST00000233027 C4orf47A7E2U8 309 aa12.08□□□□□ -0.48
NEK4-201ENST00000233027 H0YIG0 161 aa12.08□□□□□ -0.48
NEK4-201ENST00000233027 B4GALT1P15291 398 aa12.08□□□□□ -0.48
NEK4-201ENST00000233027 GLRA1P23415 457 aa12.08□□□□□ -0.48
NEK4-201ENST00000233027 GPX8Q8TED1 209 aa12.08□□□□□ -0.48
NEK4-201ENST00000233027 PINX1Q96BK5 328 aaKnown RBP12.08□□□□□ -0.48
NEK4-201ENST00000233027 MRGPRX1Q96LB2 322 aa12.08□□□□□ -0.48
NEK4-201ENST00000233027 OR2A14Q96R47 310 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms