RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 RAB11AP62491 216 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 HIST2H3PS2Q5TEC6 136 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 KANSL1Q7Z3B3 1105 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 FBLIM1Q8WUP2 373 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 COX14Q96I36 57 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 PTDSS2Q9BVG9 487 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 CFHR5Q9BXR6 569 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 YBX2Q9Y2T7 364 aaKnown RBP10.39□□□□□ -0.75
NOD1-201ENST00000222823 MN1Q10571 1320 aaPredicted RBP10.39□□□□□ -0.75
NOD1-201ENST00000222823 PMS2P1A4D2B8 440 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 LRP5LA4QPB2 252 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 ZNF705FA8MVS1 300 aaPredicted RBP10.39□□□□□ -0.75
NOD1-201ENST00000222823 HSD17B6O14756 317 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 ARPC3O15145 178 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 XRCC2O43543 280 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 ZNF705DP0CH99 300 aaPredicted RBP10.39□□□□□ -0.75
NOD1-201ENST00000222823 ZNF705BP0CI00 300 aaPredicted RBP10.39□□□□□ -0.75
NOD1-201ENST00000222823 AADACP22760 399 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 BAK1Q16611 211 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 TMUB2Q71RG4 321 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 GPBAR1Q8TDU6 330 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 SCARB1Q8WTV0 552 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 C3orf49Q96BT1 292 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 VN1R1Q9GZP7 353 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 SRRQ9GZT4 340 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 EGLN1Q9GZT9 426 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 TMEM9BQ9NQ34 198 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 GHRLQ9UBU3 117 aa10.39□□□□□ -0.75
NOD1-201ENST00000222823 ZNF638Q14966 1978 aaKnown RBP10.38□□□□□ -0.75
NOD1-201ENST00000222823 GLAP06280 429 aa10.38□□□□□ -0.75
NOD1-201ENST00000222823 B4GALT1P15291 398 aa10.38□□□□□ -0.75
NOD1-201ENST00000222823 PI3P19957 117 aa10.38□□□□□ -0.75
NOD1-201ENST00000222823 CCDC190Q86UF4 302 aa10.38□□□□□ -0.75
NOD1-201ENST00000222823 OR13C8Q8NGS7 320 aa10.38□□□□□ -0.75
NOD1-201ENST00000222823 UHRF2Q96PU4 802 aa10.38□□□□□ -0.75
NOD1-201ENST00000222823 OR8B4Q96RC9 309 aa10.38□□□□□ -0.75
NOD1-201ENST00000222823 C20orf141Q9NUB4 165 aa10.38□□□□□ -0.75
NOD1-201ENST00000222823 CACNA1IQ9P0X4 2223 aa10.38□□□□□ -0.75
NOD1-201ENST00000222823 IGHV1OR21-1A0A087WYE8 117 aa10.38□□□□□ -0.75
NOD1-201ENST00000222823 FAM221AA4D161 298 aa10.38□□□□□ -0.75
NOD1-201ENST00000222823 ANKUB1A6NFN9 424 aa10.38□□□□□ -0.75
NOD1-201ENST00000222823 NKX6-3A6NJ46 265 aa10.38□□□□□ -0.75
NOD1-201ENST00000222823 IMPA2O14732 288 aa10.38□□□□□ -0.75
NOD1-201ENST00000222823 HOXB3P14651 431 aaPredicted RBP10.38□□□□□ -0.75
NOD1-201ENST00000222823 RPS23P62266 143 aaKnown RBP10.38□□□□□ -0.75
NOD1-201ENST00000222823 SLC25A35Q3KQZ1 300 aa10.38□□□□□ -0.75
NOD1-201ENST00000222823 LSRQ86X29 649 aaPredicted RBP10.38□□□□□ -0.75
NOD1-201ENST00000222823 ST7LQ8TDW4 575 aa10.38□□□□□ -0.75
NOD1-201ENST00000222823 HPSE2Q8WWQ2 592 aa10.38□□□□□ -0.75
NOD1-201ENST00000222823 DOCK4Q8N1I0 1966 aa10.38□□□□□ -0.75
NOD1-201ENST00000222823 TRAV1-2A0A0B4J238 106 aa10.38□□□□□ -0.75
NOD1-201ENST00000222823 HPNP05981 417 aa10.38□□□□□ -0.75
NOD1-201ENST00000222823 NDUFB7P17568 137 aa10.38□□□□□ -0.75
NOD1-201ENST00000222823 COL9A1P20849 921 aa10.38□□□□□ -0.75
NOD1-201ENST00000222823 DCTDP32321 178 aa10.38□□□□□ -0.75
NOD1-201ENST00000222823 UBE2MP61081 183 aaKnown RBP10.38□□□□□ -0.75
NOD1-201ENST00000222823 CDK5Q00535 292 aa10.38□□□□□ -0.75
NOD1-201ENST00000222823 TOMM34Q15785 309 aaPredicted RBP10.38□□□□□ -0.75
NOD1-201ENST00000222823 SLC25A26Q70HW3 274 aa10.38□□□□□ -0.75
NOD1-201ENST00000222823 ZNF573Q86YE8 665 aa10.38□□□□□ -0.75
NOD1-201ENST00000222823 OTOSQ8NHW6 89 aa10.38□□□□□ -0.75
NOD1-201ENST00000222823 ALKBH3Q96Q83 286 aaPredicted RBP10.38□□□□□ -0.75
NOD1-201ENST00000222823 EXOSC3Q9NQT5 275 aaKnown RBP10.38□□□□□ -0.75
NOD1-201ENST00000222823 WNT16Q9UBV4 365 aa10.38□□□□□ -0.75
NOD1-201ENST00000222823 FLVCR2Q9UPI3 526 aa10.38□□□□□ -0.75
NOD1-201ENST00000222823 RAD52P43351 418 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 AGFG1P52594 562 aaKnown RBP10.37□□□□□ -0.75
NOD1-201ENST00000222823 ZNF121P58317 390 aaPredicted RBP10.37□□□□□ -0.75
NOD1-201ENST00000222823 TESK1Q15569 626 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 CEACAM16Q2WEN9 425 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 DMRTC1Q5HYR2 192 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 OR8G2PQ6IF36 304 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 ROBO4Q8WZ75 1007 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 MARC2Q969Z3 335 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 ZPBPQ9BS86 351 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 EDEM2Q9BV94 578 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 ARV1Q9H2C2 271 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 KLK11Q9UBX7 282 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 EP400Q96L91 3159 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 BHLHE40O14503 412 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 NXPH3O95157 252 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 OR5H8P0DN80 308 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 SELEP16581 610 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 FGF9P31371 208 aaPredicted RBP10.37□□□□□ -0.75
NOD1-201ENST00000222823 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.37□□□□□ -0.75
NOD1-201ENST00000222823 GUSBP11Q6P575 273 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 SMIM4Q8WVI0 70 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 RBPMSQ93062 196 aaKnown RBP10.37□□□□□ -0.75
NOD1-201ENST00000222823 AUNIPQ9H7T9 357 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 SLC17A2O00624 439 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 TNFSF11O14788 317 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 FOLR1P15328 257 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 PSMB6P28072 239 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 LGALS4P56470 323 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 HMGN3Q15651 99 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 KCNIP4Q6PIL6 250 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 LHFPL2Q6ZUX7 228 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 SCCPDHQ8NBX0 429 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 DEFB108BQ8NET1 73 aa10.37□□□□□ -0.75
NOD1-201ENST00000222823 OR1S2Q8NGQ3 325 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms