RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 MBD2Q9UBB5 411 aa11.82□□□□□ -0.52
SRP54-201ENST00000216774 HRH3Q9Y5N1 445 aa11.82□□□□□ -0.52
SRP54-201ENST00000216774 DNASE2O00115 360 aaPredicted RBP11.81□□□□□ -0.52
SRP54-201ENST00000216774 NUPL2O15504 423 aaKnown RBP11.81□□□□□ -0.52
SRP54-201ENST00000216774 CRHP06850 196 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 FOSL2P15408 326 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 ZNF20P17024 532 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 AKR1C4P17516 323 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 NAT1P18440 290 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 CX3CR1P49238 355 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 EMP2P54851 167 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 CYCSP99999 105 aaKnown RBP11.81□□□□□ -0.52
SRP54-201ENST00000216774 BEX5Q5H9J7 111 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 TMEM185AQ8NFB2 350 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 CADM4Q8NFZ8 388 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 OR4K15Q8NH41 348 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 NUBPLQ8TB37 319 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 CASTOR1Q8WTX7 329 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 MARC2Q969Z3 335 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 ZNF501Q96CX3 271 aaPredicted RBP11.81□□□□□ -0.52
SRP54-201ENST00000216774 SLC6A15Q9H2J7 730 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 FN3KRPQ9HA64 309 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 CHMP1AQ9HD42 196 aaPredicted RBP11.81□□□□□ -0.52
SRP54-201ENST00000216774 TEX13DA0A0J9YY54 714 aaPredicted RBP11.81□□□□□ -0.52
SRP54-201ENST00000216774 C2orf72A6NCS6 295 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 CEACAM18A8MTB9 384 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 ZNF878C9JN71 531 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 F8VVB4 439 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 F8VWA3 439 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 CSNK1EP49674 416 aaKnown RBP11.81□□□□□ -0.52
SRP54-201ENST00000216774 DEFA5Q01523 94 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 ZNF169Q14929 603 aaPredicted RBP11.81□□□□□ -0.52
SRP54-201ENST00000216774 FAM189A2Q15884 450 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 VAX1Q5SQQ9 334 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 C16orf47Q6ZP98 133 aaPredicted RBP11.81□□□□□ -0.52
SRP54-201ENST00000216774 PGAP1Q75T13 922 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 KCTD9Q7L273 389 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 ARRDC1Q8N5I2 433 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 ADPRHL1Q8NDY3 354 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 OR4K17Q8NGC6 315 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 OR5T2Q8NGG2 359 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 TERB2Q8NHR7 220 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 RNF138Q8WVD3 245 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 PIK3IP1Q96FE7 263 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 MRGPRX4Q96LA9 322 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 FOXQ1Q9C009 403 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 LPAR5Q9H1C0 372 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 FGF21Q9NSA1 209 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 B3GAT1Q9P2W7 334 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 VDAC3Q9Y277 283 aa11.81□□□□□ -0.52
SRP54-201ENST00000216774 RP1P56715 2156 aa11.8□□□□□ -0.52
SRP54-201ENST00000216774 IGHV3-20A0A0C4DH32 117 aa11.8□□□□□ -0.52
SRP54-201ENST00000216774 PIAS2O75928 621 aa11.8□□□□□ -0.52
SRP54-201ENST00000216774 PMP2P02689 132 aa11.8□□□□□ -0.52
SRP54-201ENST00000216774 IL32P24001 234 aa11.8□□□□□ -0.52
SRP54-201ENST00000216774 MSX1P28360 303 aa11.8□□□□□ -0.52
SRP54-201ENST00000216774 FOXK1P85037 733 aa11.8□□□□□ -0.52
SRP54-201ENST00000216774 NAAAQ02083 359 aa11.8□□□□□ -0.52
SRP54-201ENST00000216774 PNLIPRP3Q17RR3 467 aa11.8□□□□□ -0.52
SRP54-201ENST00000216774 TMEM128Q5BJH2 165 aa11.8□□□□□ -0.52
SRP54-201ENST00000216774 SLC25A53Q5H9E4 307 aa11.8□□□□□ -0.52
SRP54-201ENST00000216774 COX15Q7KZN9 410 aa11.8□□□□□ -0.52
SRP54-201ENST00000216774 ZNF101Q8IZC7 436 aa11.8□□□□□ -0.52
SRP54-201ENST00000216774 CLRN3Q8NCR9 226 aa11.8□□□□□ -0.52
SRP54-201ENST00000216774 NFAM1Q8NET5 270 aaPredicted RBP11.8□□□□□ -0.52
SRP54-201ENST00000216774 OR5AP2Q8NGF4 316 aa11.8□□□□□ -0.52
SRP54-201ENST00000216774 KCNG3Q8TAE7 436 aa11.8□□□□□ -0.52
SRP54-201ENST00000216774 OR51E1Q8TCB6 317 aa11.8□□□□□ -0.52
SRP54-201ENST00000216774 EMC6Q9BV81 110 aa11.8□□□□□ -0.52
SRP54-201ENST00000216774 NKX6-2Q9C056 277 aaPredicted RBP11.8□□□□□ -0.52
SRP54-201ENST00000216774 SRPK3Q9UPE1 567 aa11.8□□□□□ -0.52
SRP54-201ENST00000216774 LHFPL6Q9Y693 200 aa11.8□□□□□ -0.52
SRP54-201ENST00000216774 C5orf51A6NDU8 294 aa11.8□□□□□ -0.52
SRP54-201ENST00000216774 EEF1E1-BLOC1S5C9J1V9 151 aa11.8□□□□□ -0.52
SRP54-201ENST00000216774 ABCD4O14678 606 aa11.8□□□□□ -0.52
SRP54-201ENST00000216774 FGF16O43320 207 aa11.8□□□□□ -0.52
SRP54-201ENST00000216774 ZNF354AO60765 605 aaPredicted RBP11.8□□□□□ -0.52
SRP54-201ENST00000216774 ZNF41P51814 821 aaPredicted RBP11.8□□□□□ -0.52
SRP54-201ENST00000216774 LBX1P52954 281 aa11.8□□□□□ -0.52
SRP54-201ENST00000216774 SHISA6Q6ZSJ9 500 aa11.8□□□□□ -0.52
SRP54-201ENST00000216774 NAA40Q86UY6 237 aa11.8□□□□□ -0.52
SRP54-201ENST00000216774 OR2AJ1Q8NGZ0 328 aa11.8□□□□□ -0.52
SRP54-201ENST00000216774 STT3BQ8TCJ2 826 aa11.8□□□□□ -0.52
SRP54-201ENST00000216774 MARCH1Q8TCQ1 289 aa11.8□□□□□ -0.52
SRP54-201ENST00000216774 ZNF416Q9BWM5 594 aa11.8□□□□□ -0.52
SRP54-201ENST00000216774 DUSP15Q9H1R2 295 aaPredicted RBP11.8□□□□□ -0.52
SRP54-201ENST00000216774 SLC22A11Q9NSA0 550 aa11.8□□□□□ -0.52
SRP54-201ENST00000216774 PCDHB10Q9UN67 800 aa11.8□□□□□ -0.52
SRP54-201ENST00000216774 MRPS28Q9Y2Q9 187 aaKnown RBP11.8□□□□□ -0.52
SRP54-201ENST00000216774 SPTBN5Q9NRC6 3674 aaKnown RBP11.8□□□□□ -0.52
SRP54-201ENST00000216774 IGLV3-12A0A075B6K2 115 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 H3BML4 177 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 IGHG1P01857 330 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 GIMD1P0DJR0 217 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 TPT1P13693 172 aaKnown RBP11.79□□□□□ -0.52
SRP54-201ENST00000216774 GLB1P16278 677 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 HIST1H1DP16402 221 aaKnown RBP11.79□□□□□ -0.52
SRP54-201ENST00000216774 SERPINF1P36955 418 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 CLRN1P58418 232 aa11.79□□□□□ -0.52
SRP54-201ENST00000216774 MYBPHQ13203 477 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms