RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 TIGITQ495A1 244 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 CALHM3Q86XJ0 350 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 DTWD2Q8NBA8 298 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 OR10X1Q8NGY0 326 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 TRIB1Q96RU8 372 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 COMMD5Q9GZQ3 224 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 SLCO1C1Q9NYB5 712 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 KIAA1456Q9P272 454 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 ANKUB1A6NFN9 424 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 LINC01387J3KSC0 135 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 TGOLN2O43493 480 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 MGMTP16455 207 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 SOX18P35713 384 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 B4GALNT1Q00973 533 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 AGERQ15109 404 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 PARP12Q9H0J9 701 aaKnown RBP12.26□□□□□ -0.45
SF3A1-201ENST00000215793 ST3GAL6Q9Y274 331 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 A0A087WUJ7 227 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 ZNF816-ZNF321PA0A0X1KG74 233 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 A0A1B0GTL3 188 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 OR6C68A6NDL8 312 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 SHISA7A6NL88 538 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 NME2P1O60361 137 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 TMEM11P17152 192 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 INSM1Q01101 510 aaPredicted RBP12.26□□□□□ -0.45
SF3A1-201ENST00000215793 PNLIPRP3Q17RR3 467 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 PXDC1Q5TGL8 231 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 ANKRD53Q8N9V6 530 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 RTN4IP1Q8WWV3 396 aaPredicted RBP12.26□□□□□ -0.45
SF3A1-201ENST00000215793 IL20Q9NYY1 176 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 SLC17A2O00624 439 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 XRCC3O43542 346 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 LRP3O75074 770 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 ADRB1P08588 477 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 PRR35P0CG20 571 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 GZMKP49863 264 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 RPL11P62913 178 aaKnown RBP12.26□□□□□ -0.45
SF3A1-201ENST00000215793 SNRPNP63162 240 aaKnown RBP12.26□□□□□ -0.45
SF3A1-201ENST00000215793 ERHP84090 104 aaKnown RBP12.26□□□□□ -0.45
SF3A1-201ENST00000215793 FOXF1Q12946 379 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 ACOT6Q3I5F7 207 aaPredicted RBP12.26□□□□□ -0.45
SF3A1-201ENST00000215793 LYG2Q86SG7 212 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 MARCH1Q8TCQ1 289 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 FOXQ1Q9C009 403 aa12.26□□□□□ -0.45
SF3A1-201ENST00000215793 UMAD1C9J7I0 102 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 DVL1O14640 695 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 ARPC3O15145 178 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 TBX19O60806 448 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 YIF1AO95070 293 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 EPHA2P29317 976 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 HAAOP46952 286 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 DVL1P1P54792 670 aaPredicted RBP12.25□□□□□ -0.45
SF3A1-201ENST00000215793 DEFB108BQ8NET1 73 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 OR4Q3Q8NH05 313 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 OR2V1Q8NHB1 315 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 ARSGQ96EG1 525 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 SOX7Q9BT81 388 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 CACNA1SQ13698 1873 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 ZNF727A8MUV8 499 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 OR2C1O95371 312 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 COX5AP20674 150 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 ETFBKMTQ8IXQ9 262 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 GALNT16Q8N428 558 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 CCDC74BQ96LY2 380 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 ARHGDIGQ99819 225 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 FN3KRPQ9HA64 309 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 WSB2Q9NYS7 404 aaPredicted RBP12.25□□□□□ -0.45
SF3A1-201ENST00000215793 TERTO14746 1132 aaKnown RBP12.25□□□□□ -0.45
SF3A1-201ENST00000215793 PEX11BO96011 259 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 ZNF121P58317 390 aaPredicted RBP12.25□□□□□ -0.45
SF3A1-201ENST00000215793 C9orf152Q5JTZ5 239 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 LHX8Q68G74 356 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 LCN15Q6UWW0 184 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 BTNL8Q6UX41 500 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 OSR2Q8N2R0 312 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 ARRDC1Q8N5I2 433 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 BPIFCQ8NFQ6 507 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 C20orf24Q9BUV8 137 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 SRRQ9GZT4 340 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 SPNS1Q9H2V7 528 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 ISG20L2Q9H9L3 353 aaKnown RBP12.25□□□□□ -0.45
SF3A1-201ENST00000215793 MTCH1Q9NZJ7 389 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 FOXJ3Q9UPW0 622 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 MKRN2OSH3BPM6 223 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 AQP7O14520 342 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 SSSCA1O60232 199 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 FUT6P51993 359 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 ZNF705AQ6ZN79 300 aaPredicted RBP12.25□□□□□ -0.45
SF3A1-201ENST00000215793 TMPRSS11FQ6ZWK6 438 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 KIAA1958Q8N8K9 716 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 CMTM3Q96MX0 182 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 OR8B4Q96RC9 309 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 N4BP2Q86UW6 1770 aaPredicted RBP12.25□□□□□ -0.45
SF3A1-201ENST00000215793 CD37P11049 281 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 THBS4P35443 961 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 MMP15P51511 669 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 P2RX3P56373 397 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 DSCR4P56555 118 aaPredicted RBP12.25□□□□□ -0.45
SF3A1-201ENST00000215793 SSX9Q7RTT3 188 aa12.25□□□□□ -0.45
SF3A1-201ENST00000215793 FGF14Q92915 247 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms