RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 PITPNAQ00169 270 aa15.11■□□□□ 0.01
PHGDH-234ENST00000642041 FMODQ06828 376 aa15.11■□□□□ 0.01
PHGDH-234ENST00000642041 RIN1Q13671 783 aa15.11■□□□□ 0.01
PHGDH-234ENST00000642041 SFXN4Q6P4A7 337 aa15.11■□□□□ 0.01
PHGDH-234ENST00000642041 CLEC9AQ6UXN8 241 aa15.11■□□□□ 0.01
PHGDH-234ENST00000642041 CDH26Q8IXH8 852 aa15.11■□□□□ 0.01
PHGDH-234ENST00000642041 UBQLNLQ8IYU4 475 aa15.11■□□□□ 0.01
PHGDH-234ENST00000642041 MFSD4AQ8N468 514 aa15.11■□□□□ 0.01
PHGDH-234ENST00000642041 ZIC4Q8N9L1 334 aa15.11■□□□□ 0.01
PHGDH-234ENST00000642041 SPTSSAQ969W0 71 aa15.11■□□□□ 0.01
PHGDH-234ENST00000642041 C10orf35Q96D05 121 aa15.11■□□□□ 0.01
PHGDH-234ENST00000642041 DIRAS2Q96HU8 199 aa15.11■□□□□ 0.01
PHGDH-234ENST00000642041 KCNS3Q9BQ31 491 aa15.11■□□□□ 0.01
PHGDH-234ENST00000642041 SLC24A3Q9HC58 644 aa15.11■□□□□ 0.01
PHGDH-234ENST00000642041 NEK6Q9HC98 313 aa15.11■□□□□ 0.01
PHGDH-234ENST00000642041 GDF2Q9UK05 429 aaPredicted RBP15.11■□□□□ 0.01
PHGDH-234ENST00000642041 OR52A1Q9UKL2 312 aa15.11■□□□□ 0.01
PHGDH-234ENST00000642041 DHDHQ9UQ10 334 aa15.11■□□□□ 0.01
PHGDH-234ENST00000642041 GRIP1Q9Y3R0 1128 aa15.11■□□□□ 0.01
PHGDH-234ENST00000642041 V9GY05 133 aa15.11■□□□□ 0.01
PHGDH-234ENST00000642041 FABP12A6NFH5 140 aa15.1■□□□□ 0.01
PHGDH-234ENST00000642041 ZNF814B7Z6K7 855 aa15.1■□□□□ 0.01
PHGDH-234ENST00000642041 AQP7O14520 342 aa15.1■□□□□ 0.01
PHGDH-234ENST00000642041 KRT33AO76009 404 aa15.1■□□□□ 0.01
PHGDH-234ENST00000642041 HOXD4P09016 255 aaPredicted RBP15.1■□□□□ 0.01
PHGDH-234ENST00000642041 CALCBP10092 127 aa15.1■□□□□ 0.01
PHGDH-234ENST00000642041 BMP4P12644 408 aa15.1■□□□□ 0.01
PHGDH-234ENST00000642041 DNASE1P24855 282 aa15.1■□□□□ 0.01
PHGDH-234ENST00000642041 PSMB10P40306 273 aa15.1■□□□□ 0.01
PHGDH-234ENST00000642041 NR4A2P43354 598 aa15.1■□□□□ 0.01
PHGDH-234ENST00000642041 PSMA6P60900 246 aaKnown RBP15.1■□□□□ 0.01
PHGDH-234ENST00000642041 TFF3Q07654 80 aa15.1■□□□□ 0.01
PHGDH-234ENST00000642041 FAM189A2Q15884 450 aa15.1■□□□□ 0.01
PHGDH-234ENST00000642041 BCL2L15Q5TBC7 163 aa15.1■□□□□ 0.01
PHGDH-234ENST00000642041 DOLPP1Q86YN1 238 aa15.1■□□□□ 0.01
PHGDH-234ENST00000642041 ZNF385AQ96PM9 386 aaKnown RBP15.1■□□□□ 0.01
PHGDH-234ENST00000642041 UCN2Q96RP3 112 aa15.1■□□□□ 0.01
PHGDH-234ENST00000642041 KCNJ15Q99712 375 aa15.1■□□□□ 0.01
PHGDH-234ENST00000642041 PDCD1LG2Q9BQ51 273 aa15.1■□□□□ 0.01
PHGDH-234ENST00000642041 RBM24Q9BX46 236 aaKnown RBP15.1■□□□□ 0.01
PHGDH-234ENST00000642041 BARHL1Q9BZE3 327 aa15.1■□□□□ 0.01
PHGDH-234ENST00000642041 HDHD2Q9H0R4 259 aa15.1■□□□□ 0.01
PHGDH-234ENST00000642041 SLCO5A1Q9H2Y9 848 aa15.1■□□□□ 0.01
PHGDH-234ENST00000642041 CENPMQ9NSP4 180 aa15.1■□□□□ 0.01
PHGDH-234ENST00000642041 DDX28Q9NUL7 540 aaKnown RBP15.1■□□□□ 0.01
PHGDH-234ENST00000642041 KLHDC2Q9Y2U9 406 aa15.1■□□□□ 0.01
PHGDH-234ENST00000642041 ETV7Q9Y603 341 aa15.1■□□□□ 0.01
PHGDH-234ENST00000642041 TRBV5-7A0A0A0MS05 114 aa15.09■□□□□ 0.01
PHGDH-234ENST00000642041 UPK1BO75841 260 aa15.09■□□□□ 0.01
PHGDH-234ENST00000642041 CNOT4O95628 575 aaKnown RBP15.09■□□□□ 0.01
PHGDH-234ENST00000642041 APOA1P02647 267 aa15.09■□□□□ 0.01
PHGDH-234ENST00000642041 HEXAP06865 529 aa15.09■□□□□ 0.01
PHGDH-234ENST00000642041 ERCC1P07992 297 aaPredicted RBP15.09■□□□□ 0.01
PHGDH-234ENST00000642041 FSTP19883 344 aa15.09■□□□□ 0.01
PHGDH-234ENST00000642041 STARP49675 285 aa15.09■□□□□ 0.01
PHGDH-234ENST00000642041 NANOS3P60323 173 aaKnown RBP15.09■□□□□ 0.01
PHGDH-234ENST00000642041 HIST1H3AP68431 136 aa15.09■□□□□ 0.01
PHGDH-234ENST00000642041 HIST2H3PS2Q5TEC6 136 aa15.09■□□□□ 0.01
PHGDH-234ENST00000642041 CARD17Q5XLA6 110 aa15.09■□□□□ 0.01
PHGDH-234ENST00000642041 GLT8D1Q68CQ7 371 aa15.09■□□□□ 0.01
PHGDH-234ENST00000642041 LYPD4Q6UWN0 246 aa15.09■□□□□ 0.01
PHGDH-234ENST00000642041 HIST2H3AQ71DI3 136 aa15.09■□□□□ 0.01
PHGDH-234ENST00000642041 CCDC36Q8IYA8 594 aa15.09■□□□□ 0.01
PHGDH-234ENST00000642041 ELMOD2Q8IZ81 293 aa15.09■□□□□ 0.01
PHGDH-234ENST00000642041 PARP16Q8N5Y8 322 aa15.09■□□□□ 0.01
PHGDH-234ENST00000642041 NKAIN3Q8N8D7 197 aa15.09■□□□□ 0.01
PHGDH-234ENST00000642041 SMAP2Q8WU79 429 aaPredicted RBP15.09■□□□□ 0.01
PHGDH-234ENST00000642041 TSEN15Q8WW01 171 aaKnown RBP15.09■□□□□ 0.01
PHGDH-234ENST00000642041 ATF6BQ99941 703 aa15.09■□□□□ 0.01
PHGDH-234ENST00000642041 LIME1Q9H400 295 aa15.09■□□□□ 0.01
PHGDH-234ENST00000642041 NOX4Q9NPH5 578 aa15.09■□□□□ 0.01
PHGDH-234ENST00000642041 NUFIP1Q9UHK0 495 aaKnown RBP15.09■□□□□ 0.01
PHGDH-234ENST00000642041 EDARQ9UNE0 448 aa15.09■□□□□ 0.01
PHGDH-234ENST00000642041 KIAA1549Q9HCM3 1950 aa15.09■□□□□ 0.01
PHGDH-234ENST00000642041 FREM3P0C091 2139 aa15.08■□□□□ 0.01
PHGDH-234ENST00000642041 AHRRA9YTQ3 701 aa15.08■□□□□ 0
PHGDH-234ENST00000642041 AIPO00170 330 aa15.08■□□□□ 0
PHGDH-234ENST00000642041 CTDSP2O14595 271 aa15.08■□□□□ 0
PHGDH-234ENST00000642041 EPXP11678 715 aa15.08■□□□□ 0
PHGDH-234ENST00000642041 ABOP16442 354 aa15.08■□□□□ 0
PHGDH-234ENST00000642041 EVX1P49640 407 aa15.08■□□□□ 0
PHGDH-234ENST00000642041 SGCAQ16586 387 aa15.08■□□□□ 0
PHGDH-234ENST00000642041 WDR38Q5JTN6 314 aa15.08■□□□□ 0
PHGDH-234ENST00000642041 IDNKQ5T6J7 187 aa15.08■□□□□ 0
PHGDH-234ENST00000642041 C1QTNF12Q5T7M4 302 aa15.08■□□□□ 0
PHGDH-234ENST00000642041 OR7E24Q6IFN5 339 aa15.08■□□□□ 0
PHGDH-234ENST00000642041 ZNF627Q7L945 461 aa15.08■□□□□ 0
PHGDH-234ENST00000642041 FGD2Q7Z6J4 655 aa15.08■□□□□ 0
PHGDH-234ENST00000642041 LUZP2Q86TE4 346 aa15.08■□□□□ 0
PHGDH-234ENST00000642041 RFLNBQ8N5W9 214 aa15.08■□□□□ 0
PHGDH-234ENST00000642041 RAB40AQ8WXH6 277 aa15.08■□□□□ 0
PHGDH-234ENST00000642041 MBD6Q96DN6 1003 aa15.08■□□□□ 0
PHGDH-234ENST00000642041 OR14A2Q96R54 314 aa15.08■□□□□ 0
PHGDH-234ENST00000642041 PRDM14Q9GZV8 571 aa15.08■□□□□ 0
PHGDH-234ENST00000642041 SPATA2Q9UM82 520 aa15.08■□□□□ 0
PHGDH-234ENST00000642041 TIMM10BQ9Y5J6 103 aa15.08■□□□□ 0
PHGDH-234ENST00000642041 LHFPL6Q9Y693 200 aa15.08■□□□□ 0
PHGDH-234ENST00000642041 ZNF587BE7ETH6 402 aa15.07■□□□□ 0
PHGDH-234ENST00000642041 RAMP1O60894 148 aa15.07■□□□□ 0
PHGDH-234ENST00000642041 SRSF10O75494 262 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms