RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 PLATP00750 562 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 IL2RAP01589 272 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 H2BFMP0C1H6 154 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 CNR1P21554 472 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 BDKRB2P30411 391 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 POU3F1Q03052 451 aaPredicted RBP12.31□□□□□ -0.44
PHGDH-233ENST00000642021 ZNF345Q14585 488 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 TMEM244Q5VVB8 128 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 ACOT7LQ6ZUV0 252 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 KCTD9Q7L273 389 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 GKN2Q86XP6 184 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.31□□□□□ -0.44
PHGDH-233ENST00000642021 THAP3Q8WTV1 239 aaPredicted RBP12.31□□□□□ -0.44
PHGDH-233ENST00000642021 MITD1Q8WV92 249 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 PRRT1Q99946 306 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 MICU1Q9BPX6 476 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 SOX7Q9BT81 388 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 SELENOIQ9C0D9 397 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 FAM206AQ9NX38 181 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 COPS7AQ9UBW8 275 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 KCNK7Q9Y2U2 307 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 HRH3Q9Y5N1 445 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 METTL21EPA6NDL7 271 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 EEF1E1-BLOC1S5C9J1V9 151 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 SULT2B1O00204 365 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 EFSO43281 561 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 GP1BAP07359 652 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 AKR1C4P17516 323 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 ANOS1P23352 680 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 MMP16P51512 607 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 MEF2DQ14814 521 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 SMAD2Q15796 467 aaKnown RBP12.31□□□□□ -0.44
PHGDH-233ENST00000642021 LPCAT3Q6P1A2 487 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 UNQ6126/PRO20091Q6UXV3 157 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 OR10S1Q8NGN2 331 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 RNF133Q8WVZ7 376 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 ZDHHC12Q96GR4 267 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 NICN1Q9BSH3 213 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 DNTTIP1Q9H147 329 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 SUSD2Q9UGT4 822 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 VDAC3Q9Y277 283 aa12.31□□□□□ -0.44
PHGDH-233ENST00000642021 WDFY3Q8IZQ1 3526 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 TMEM200CA6NKL6 621 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 NPIPA5E9PKD4 350 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 NUDT21O43809 227 aaKnown RBP12.3□□□□□ -0.44
PHGDH-233ENST00000642021 SSX5O60225 188 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 MYF5P13349 255 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 HLA-GP17693 338 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 RAB6AP20340 208 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 VAMP1P23763 118 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 FBXW4P57775 412 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 TMPRSS9Q7Z410 1059 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 NKAIN3Q8N8D7 197 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 TMEM185AQ8NFB2 350 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 C11orf40Q8WZ69 217 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 NUDT22Q9BRQ3 303 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 FAM117AQ9C073 453 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 CTSFQ9UBX1 484 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 NPIPA1Q9UND3 350 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 A0A1W2PR77 199 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 FBLP22087 321 aaKnown RBP12.3□□□□□ -0.44
PHGDH-233ENST00000642021 CASRP41180 1078 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 PPIAP62937 165 aaKnown RBP12.3□□□□□ -0.44
PHGDH-233ENST00000642021 PHF19Q5T6S3 580 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 OR13C9Q8NGT0 318 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 CHRNA10Q9GZZ6 450 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 MBD2Q9UBB5 411 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 UNC13CQ8NB66 2214 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 PMP2P02689 132 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 CD38P28907 300 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 TSPAN7P41732 249 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 AKR1C2P52895 323 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 HSD11B2P80365 405 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 AKR1C1Q04828 323 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 SNTB1Q13884 538 aaKnown RBP12.3□□□□□ -0.44
PHGDH-233ENST00000642021 PAN3Q58A45 887 aaKnown RBP12.3□□□□□ -0.44
PHGDH-233ENST00000642021 RAB12Q6IQ22 244 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 H1FNTQ75WM6 255 aaPredicted RBP12.3□□□□□ -0.44
PHGDH-233ENST00000642021 OR1M1Q8NGA1 313 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 OR1S2Q8NGQ3 325 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 FOXRED1Q96CU9 486 aaPredicted RBP12.3□□□□□ -0.44
PHGDH-233ENST00000642021 SLAMF6Q96DU3 332 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 MVB12AQ96EY5 273 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 GAREM1Q9H706 876 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 IFT46Q9NQC8 304 aa12.3□□□□□ -0.44
PHGDH-233ENST00000642021 IGHV1OR15-9A0A0B4J2B8 117 aa12.29□□□□□ -0.44
PHGDH-233ENST00000642021 C2CD4DB7Z1M9 353 aa12.29□□□□□ -0.44
PHGDH-233ENST00000642021 F5H0A9 414 aaPredicted RBP12.29□□□□□ -0.44
PHGDH-233ENST00000642021 H3BML4 177 aa12.29□□□□□ -0.44
PHGDH-233ENST00000642021 OPN1LWP04000 364 aa12.29□□□□□ -0.44
PHGDH-233ENST00000642021 HSD11B1P28845 292 aa12.29□□□□□ -0.44
PHGDH-233ENST00000642021 HSF1Q00613 529 aa12.29□□□□□ -0.44
PHGDH-233ENST00000642021 MC2RQ01718 297 aa12.29□□□□□ -0.44
PHGDH-233ENST00000642021 INPP5JQ15735 1006 aaPredicted RBP12.29□□□□□ -0.44
PHGDH-233ENST00000642021 DEGS2Q6QHC5 323 aa12.29□□□□□ -0.44
PHGDH-233ENST00000642021 TMPPEQ6ZT21 453 aa12.29□□□□□ -0.44
PHGDH-233ENST00000642021 ANGPTL5Q86XS5 388 aa12.29□□□□□ -0.44
PHGDH-233ENST00000642021 NARS2Q96I59 477 aaKnown RBP12.29□□□□□ -0.44
PHGDH-233ENST00000642021 PBOV1Q9GZY1 135 aa12.29□□□□□ -0.44
PHGDH-233ENST00000642021 FER1L5A0AVI2 2057 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms