RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 PRR23D1E9PI22 279 aaPredicted RBP12.73□□□□□ -0.37
PHGDH-231ENST00000641939 SURF4O15260 269 aa12.73□□□□□ -0.37
PHGDH-231ENST00000641939 GLCEO94923 617 aa12.73□□□□□ -0.37
PHGDH-231ENST00000641939 PRR23D2P0DMB1 279 aaPredicted RBP12.73□□□□□ -0.37
PHGDH-231ENST00000641939 SELEP16581 610 aa12.73□□□□□ -0.37
PHGDH-231ENST00000641939 GSTT1P30711 240 aa12.73□□□□□ -0.37
PHGDH-231ENST00000641939 OTX1P32242 354 aaPredicted RBP12.73□□□□□ -0.37
PHGDH-231ENST00000641939 SLC6A9P48067 706 aa12.73□□□□□ -0.37
PHGDH-231ENST00000641939 LMO4P61968 165 aa12.73□□□□□ -0.37
PHGDH-231ENST00000641939 MVKQ03426 396 aa12.73□□□□□ -0.37
PHGDH-231ENST00000641939 GK2Q14410 553 aaPredicted RBP12.73□□□□□ -0.37
PHGDH-231ENST00000641939 TAF13Q15543 124 aa12.73□□□□□ -0.37
PHGDH-231ENST00000641939 ATP6AP1Q15904 470 aa12.73□□□□□ -0.37
PHGDH-231ENST00000641939 PLBD1Q6P4A8 553 aa12.73□□□□□ -0.37
PHGDH-231ENST00000641939 FAHD1Q6P587 224 aa12.73□□□□□ -0.37
PHGDH-231ENST00000641939 ERI1Q8IV48 349 aaKnown RBP12.73□□□□□ -0.37
PHGDH-231ENST00000641939 OR13G1Q8NGZ3 307 aa12.73□□□□□ -0.37
PHGDH-231ENST00000641939 SLAMF6Q96DU3 332 aa12.73□□□□□ -0.37
PHGDH-231ENST00000641939 INTS14Q96SY0 518 aa12.73□□□□□ -0.37
PHGDH-231ENST00000641939 TEX12Q9BXU0 123 aa12.73□□□□□ -0.37
PHGDH-231ENST00000641939 OR51V1Q9H2C8 321 aa12.73□□□□□ -0.37
PHGDH-231ENST00000641939 MARCH7Q9H992 704 aa12.73□□□□□ -0.37
PHGDH-231ENST00000641939 SLC25A19Q9HC21 320 aa12.73□□□□□ -0.37
PHGDH-231ENST00000641939 PAPOLBQ9NRJ5 636 aaKnown RBP12.73□□□□□ -0.37
PHGDH-231ENST00000641939 IL19Q9UHD0 177 aa12.73□□□□□ -0.37
PHGDH-231ENST00000641939 AP4S1Q9Y587 144 aa12.73□□□□□ -0.37
PHGDH-231ENST00000641939 KIAA1324LA8MWY0 1029 aaPredicted RBP12.72□□□□□ -0.37
PHGDH-231ENST00000641939 ZNF878C9JN71 531 aa12.72□□□□□ -0.37
PHGDH-231ENST00000641939 CIB2O75838 187 aa12.72□□□□□ -0.37
PHGDH-231ENST00000641939 FAM157CP0CG43 387 aa12.72□□□□□ -0.37
PHGDH-231ENST00000641939 HNF1AP20823 631 aa12.72□□□□□ -0.37
PHGDH-231ENST00000641939 FASP25445 335 aa12.72□□□□□ -0.37
PHGDH-231ENST00000641939 DAPP51397 102 aa12.72□□□□□ -0.37
PHGDH-231ENST00000641939 EIF2B1Q14232 305 aaKnown RBP12.72□□□□□ -0.37
PHGDH-231ENST00000641939 FAM120AOSQ5T036 256 aa12.72□□□□□ -0.37
PHGDH-231ENST00000641939 TMEM236Q5W0B7 351 aa12.72□□□□□ -0.37
PHGDH-231ENST00000641939 DRAM2Q6UX65 266 aa12.72□□□□□ -0.37
PHGDH-231ENST00000641939 DPY19L4Q7Z388 723 aa12.72□□□□□ -0.37
PHGDH-231ENST00000641939 PEG10Q86TG7 708 aaKnown RBP12.72□□□□□ -0.37
PHGDH-231ENST00000641939 CPOQ8IVL8 374 aa12.72□□□□□ -0.37
PHGDH-231ENST00000641939 PARP8Q8N3A8 854 aa12.72□□□□□ -0.37
PHGDH-231ENST00000641939 BHLHE23Q8NDY6 225 aa12.72□□□□□ -0.37
PHGDH-231ENST00000641939 OR6N2Q8NGY6 317 aa12.72□□□□□ -0.37
PHGDH-231ENST00000641939 ST7LQ8TDW4 575 aa12.72□□□□□ -0.37
PHGDH-231ENST00000641939 ITLN1Q8WWA0 313 aa12.72□□□□□ -0.37
PHGDH-231ENST00000641939 DUS3LQ96G46 650 aaKnown RBP12.72□□□□□ -0.37
PHGDH-231ENST00000641939 PLEKHA8Q96JA3 519 aa12.72□□□□□ -0.37
PHGDH-231ENST00000641939 KCNJ15Q99712 375 aa12.72□□□□□ -0.37
PHGDH-231ENST00000641939 SLC30A2Q9BRI3 323 aa12.72□□□□□ -0.37
PHGDH-231ENST00000641939 ZNF665Q9H7R5 613 aa12.72□□□□□ -0.37
PHGDH-231ENST00000641939 CENPMQ9NSP4 180 aa12.72□□□□□ -0.37
PHGDH-231ENST00000641939 ARHGAP32A7KAX9 2087 aa12.72□□□□□ -0.37
PHGDH-231ENST00000641939 DOCK11Q5JSL3 2073 aa12.71□□□□□ -0.37
PHGDH-231ENST00000641939 FAM157AC9JC47 383 aa12.71□□□□□ -0.37
PHGDH-231ENST00000641939 G3V2T6 193 aa12.71□□□□□ -0.37
PHGDH-231ENST00000641939 PRODHO43272 600 aa12.71□□□□□ -0.37
PHGDH-231ENST00000641939 IFNA2P01563 188 aa12.71□□□□□ -0.37
PHGDH-231ENST00000641939 FCGR1AP12314 374 aa12.71□□□□□ -0.37
PHGDH-231ENST00000641939 SLC15A1P46059 708 aa12.71□□□□□ -0.37
PHGDH-231ENST00000641939 PRKXP51817 358 aa12.71□□□□□ -0.37
PHGDH-231ENST00000641939 CRISP1P54107 249 aa12.71□□□□□ -0.37
PHGDH-231ENST00000641939 DVL1P1P54792 670 aaPredicted RBP12.71□□□□□ -0.37
PHGDH-231ENST00000641939 PRSS12P56730 875 aa12.71□□□□□ -0.37
PHGDH-231ENST00000641939 GRB2P62993 217 aaKnown RBP12.71□□□□□ -0.37
PHGDH-231ENST00000641939 CR1LQ2VPA4 569 aa12.71□□□□□ -0.37
PHGDH-231ENST00000641939 SNAI3Q3KNW1 292 aa12.71□□□□□ -0.37
PHGDH-231ENST00000641939 PGAP1Q75T13 922 aa12.71□□□□□ -0.37
PHGDH-231ENST00000641939 SHFQ7M4L6 423 aa12.71□□□□□ -0.37
PHGDH-231ENST00000641939 MRPL21Q7Z2W9 205 aaKnown RBP12.71□□□□□ -0.37
PHGDH-231ENST00000641939 TIGD4Q8IY51 512 aa12.71□□□□□ -0.37
PHGDH-231ENST00000641939 ZNF283Q8N7M2 679 aa12.71□□□□□ -0.37
PHGDH-231ENST00000641939 OR10AD1Q8NGE0 317 aa12.71□□□□□ -0.37
PHGDH-231ENST00000641939 RAB39BQ96DA2 213 aa12.71□□□□□ -0.37
PHGDH-231ENST00000641939 ZMYND19Q96E35 227 aaPredicted RBP12.71□□□□□ -0.37
PHGDH-231ENST00000641939 OR2V2Q96R30 315 aa12.71□□□□□ -0.37
PHGDH-231ENST00000641939 TMEM100Q9NV29 134 aa12.71□□□□□ -0.37
PHGDH-231ENST00000641939 PPP1R3CQ9UQK1 317 aa12.71□□□□□ -0.37
PHGDH-231ENST00000641939 A0A1B0GWJ7 208 aa12.7□□□□□ -0.38
PHGDH-231ENST00000641939 IGHV2-5P01817 119 aa12.7□□□□□ -0.38
PHGDH-231ENST00000641939 MSMBP08118 114 aa12.7□□□□□ -0.38
PHGDH-231ENST00000641939 PCMT1P22061 227 aa12.7□□□□□ -0.38
PHGDH-231ENST00000641939 ESRRGP62508 458 aa12.7□□□□□ -0.38
PHGDH-231ENST00000641939 SNAPC1Q16533 368 aa12.7□□□□□ -0.38
PHGDH-231ENST00000641939 KLHL12Q53G59 568 aa12.7□□□□□ -0.38
PHGDH-231ENST00000641939 SLC35D3Q5M8T2 416 aa12.7□□□□□ -0.38
PHGDH-231ENST00000641939 CCDC121Q6ZUS5 278 aa12.7□□□□□ -0.38
PHGDH-231ENST00000641939 SPATC1Q76KD6 591 aa12.7□□□□□ -0.38
PHGDH-231ENST00000641939 ASRGL1Q7L266 308 aa12.7□□□□□ -0.38
PHGDH-231ENST00000641939 GLCCI1Q86VQ1 547 aa12.7□□□□□ -0.38
PHGDH-231ENST00000641939 ZDHHC13Q8IUH4 622 aa12.7□□□□□ -0.38
PHGDH-231ENST00000641939 OR51F2Q8NH61 342 aa12.7□□□□□ -0.38
PHGDH-231ENST00000641939 RNF133Q8WVZ7 376 aa12.7□□□□□ -0.38
PHGDH-231ENST00000641939 SPRYD4Q8WW59 207 aaPredicted RBP12.7□□□□□ -0.38
PHGDH-231ENST00000641939 GAL3ST1Q99999 423 aa12.7□□□□□ -0.38
PHGDH-231ENST00000641939 ABHD6Q9BV23 337 aa12.7□□□□□ -0.38
PHGDH-231ENST00000641939 TOR3AQ9H497 397 aa12.7□□□□□ -0.38
PHGDH-231ENST00000641939 LPAR2Q9HBW0 351 aa12.7□□□□□ -0.38
PHGDH-231ENST00000641939 KRT84Q9NSB2 600 aa12.7□□□□□ -0.38
PHGDH-231ENST00000641939 TMEM106BQ9NUM4 274 aa12.7□□□□□ -0.38
PHGDH-231ENST00000641939 DCAF16Q9NXF7 216 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms