RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	ETFDH	Q16134	617 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	ZSWIM7	Q19AV6	140 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	HIKESHI	Q53FT3	197 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	SYT14P1	Q58G82	188 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	CEP85L	Q5SZL2	805 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	PDZK1	Q5T2W1	519 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	HHAT	Q5VTY9	493 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	MORN5	Q5VZ52	161 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	OR4F3	Q6IEY1	312 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	CBLN3	Q6UW01	205 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	ZNF704	Q6ZNC4	412 aa	Predicted RBP	5.41	□□□□□ -1.54
CASC19-238	ENST00000641523		Q6ZT83	130 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	ZNF550	Q7Z398	422 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	P2RY8	Q86VZ1	359 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	FOXRED2	Q8IWF2	684 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	ARHGAP24	Q8N264	748 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	ZNF781	Q8N8C0	355 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	WFDC11	Q8NEX6	87 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	OR9K2	Q8NGE7	335 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	OR5D16	Q8NGK9	328 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	OR1J2	Q8NGS2	313 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	ABHD3	Q8WU67	409 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	NEURL3	Q96EH8	262 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	KRTAP9-3	Q9BYQ3	159 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	FAM234A	Q9H0X4	552 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	CENPH	Q9H3R5	247 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	MEAF6	Q9HAF1	191 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	EXOSC3	Q9NQT5	275 aa	Known RBP	5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	TUBG2	Q9NRH3	451 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	ACER3	Q9NUN7	267 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	THUMPD1	Q9NXG2	353 aa	Known RBP	5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	MARCO	Q9UEW3	520 aa	Predicted RBP	5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	BTNL2	Q9UIR0	455 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	PAM16	Q9Y3D7	125 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	HDGFL3	Q9Y3E1	203 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	ZAN	Q9Y493	2812 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	COL6A5	A8TX70	2615 aa		5.41	□□□□□ -1.54
CASC19-238	ENST00000641523	FN1	P02751	2386 aa	Known RBP	5.4	□□□□□ -1.54
CASC19-238	ENST00000641523	ZNF469	Q96JG9	3925 aa	Predicted RBP	5.4	□□□□□ -1.54
CASC19-238	ENST00000641523	NPIPA5	A0A0B4J1W7	369 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523		A0A1W2PPR1	153 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	WDR91	A4D1P6	747 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	NPIPA7	E9PJI5	369 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	WNT9B	O14905	357 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	HDAC3	O15379	428 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	SSX4	O60224	188 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	GMNN	O75496	209 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	WBP4	O75554	376 aa	Known RBP	5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	CPSF4	O95639	269 aa	Known RBP	5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	KRT75	O95678	551 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	OPN1LW	P04000	364 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	CRYGC	P07315	174 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	NPIPA8	P0DM63	369 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	IDO1	P14902	403 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	PAX1	P15863	534 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	HNF1A	P20823	631 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	CD1B	P29016	333 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	ARRB2	P32121	409 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	NUDT6	P53370	316 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	SLC18A1	P54219	525 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	RPL23A	P62750	156 aa	Known RBP	5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	CSNK2B	P67870	215 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	SSBP2	P81877	361 aa	Predicted RBP	5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	SLC34A1	Q06495	639 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	MERTK	Q12866	999 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	COTL1	Q14019	142 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	SPANXN2	Q5MJ10	180 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	AGBL2	Q5U5Z8	902 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	SAXO2	Q658L1	398 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	PRR27	Q6MZM9	219 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	ADAM5	Q6NVV9	412 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	TFAP2E	Q6VUC0	442 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	GRINA	Q7Z429	371 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	ANKRD46	Q86W74	232 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	ZNF440	Q8IYI8	595 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	CLECL1	Q8IZS7	167 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	GABRG1	Q8N1C3	465 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	ZNF563	Q8TA94	476 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	PIGX	Q8TBF5	258 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	SLC26A7	Q8TE54	656 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	NTN5	Q8WTR8	489 aa	Predicted RBP	5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	S100PBP	Q96BU1	408 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	ROPN1L	Q96C74	230 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	MUCL1	Q96DR8	90 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	MARK4	Q96L34	752 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	CCDC115	Q96NT0	180 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	TRNT1	Q96Q11	434 aa	Known RBP	5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	OR5B2	Q96R09	309 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	PANX1	Q96RD7	426 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	RAB40C	Q96S21	281 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	TMEM204	Q9BSN7	226 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	PARD6B	Q9BYG5	372 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	OR51I1	Q9H343	314 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	RAD21L1	Q9H4I0	556 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	ARMC7	Q9H6L4	198 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	FAIM	Q9NVQ4	179 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	NKIRAS1	Q9NYS0	192 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	CALML5	Q9NZT1	146 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	SLC9A8	Q9Y2E8	581 aa		5.4	□□□□□ -1.55
CASC19-238	ENST00000641523	RNF115	Q9Y4L5	304 aa		5.4	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms