RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 HSFX4A0A1B0GTS1 333 aaPredicted RBP13□□□□□ -0.33
SCARB2-221ENST00000640341 HSFX3A0A1B0GWH4 333 aaPredicted RBP13□□□□□ -0.33
SCARB2-221ENST00000640341 TTRP02766 147 aa13□□□□□ -0.33
SCARB2-221ENST00000640341 IGFBP3P17936 291 aaPredicted RBP13□□□□□ -0.33
SCARB2-221ENST00000640341 PNLIPRP2P54317 469 aa13□□□□□ -0.33
SCARB2-221ENST00000640341 CFHR1Q03591 330 aa13□□□□□ -0.33
SCARB2-221ENST00000640341 FGL1Q08830 312 aa13□□□□□ -0.33
SCARB2-221ENST00000640341 FDX2Q6P4F2 183 aa13□□□□□ -0.33
SCARB2-221ENST00000640341 OVCH2Q7RTZ1 564 aa13□□□□□ -0.33
SCARB2-221ENST00000640341 OR1S2Q8NGQ3 325 aa13□□□□□ -0.33
SCARB2-221ENST00000640341 ASH2LQ9UBL3 628 aa13□□□□□ -0.33
SCARB2-221ENST00000640341 RPH3AQ9Y2J0 694 aaPredicted RBP13□□□□□ -0.33
SCARB2-221ENST00000640341 C9orf170A2RU37 121 aa13□□□□□ -0.33
SCARB2-221ENST00000640341 OR14I1A6ND48 311 aa13□□□□□ -0.33
SCARB2-221ENST00000640341 LILRA5A6NI73 299 aa13□□□□□ -0.33
SCARB2-221ENST00000640341 METTL12A8MUP2 240 aa13□□□□□ -0.33
SCARB2-221ENST00000640341 NPIPB7O75200 414 aa13□□□□□ -0.33
SCARB2-221ENST00000640341 ADAP1O75689 374 aa13□□□□□ -0.33
SCARB2-221ENST00000640341 AQP8O94778 261 aa13□□□□□ -0.33
SCARB2-221ENST00000640341 UBBP0CG47 229 aa13□□□□□ -0.33
SCARB2-221ENST00000640341 UBCP0CG48 685 aaKnown RBP13□□□□□ -0.33
SCARB2-221ENST00000640341 BCKDHBP21953 392 aa13□□□□□ -0.33
SCARB2-221ENST00000640341 SERPINF1P36955 418 aa13□□□□□ -0.33
SCARB2-221ENST00000640341 DCAF7P61962 342 aa13□□□□□ -0.33
SCARB2-221ENST00000640341 RPS27AP62979 156 aaKnown RBP13□□□□□ -0.33
SCARB2-221ENST00000640341 UBA52P62987 128 aaKnown RBP13□□□□□ -0.33
SCARB2-221ENST00000640341 MPPED2Q15777 294 aa13□□□□□ -0.33
SCARB2-221ENST00000640341 GLIPR1L1Q6UWM5 242 aa13□□□□□ -0.33
SCARB2-221ENST00000640341 PAQR4Q8N4S7 273 aaPredicted RBP13□□□□□ -0.33
SCARB2-221ENST00000640341 OR4K15Q8NH41 348 aa13□□□□□ -0.33
SCARB2-221ENST00000640341 STT3BQ8TCJ2 826 aa13□□□□□ -0.33
SCARB2-221ENST00000640341 CPNE2Q96FN4 548 aaPredicted RBP13□□□□□ -0.33
SCARB2-221ENST00000640341 C12orf10Q9HB07 376 aa13□□□□□ -0.33
SCARB2-221ENST00000640341 SLC2A4RGQ9NR83 387 aa13□□□□□ -0.33
SCARB2-221ENST00000640341 PCDHB10Q9UN67 800 aa13□□□□□ -0.33
SCARB2-221ENST00000640341 A0A0D9SG52 128 aa12.99□□□□□ -0.33
SCARB2-221ENST00000640341 A0A1B0GW55 424 aa12.99□□□□□ -0.33
SCARB2-221ENST00000640341 ZNF208O43345 1280 aa12.99□□□□□ -0.33
SCARB2-221ENST00000640341 F12P00748 615 aaPredicted RBP12.99□□□□□ -0.33
SCARB2-221ENST00000640341 DUX4L2P0CJ85 424 aa12.99□□□□□ -0.33
SCARB2-221ENST00000640341 DUX4L3P0CJ86 424 aa12.99□□□□□ -0.33
SCARB2-221ENST00000640341 DUX4L4P0CJ87 422 aa12.99□□□□□ -0.33
SCARB2-221ENST00000640341 DUX4L5P0CJ88 424 aa12.99□□□□□ -0.33
SCARB2-221ENST00000640341 DUX4L6P0CJ89 424 aa12.99□□□□□ -0.33
SCARB2-221ENST00000640341 DUX4L7P0CJ90 424 aa12.99□□□□□ -0.33
SCARB2-221ENST00000640341 CLRN1P58418 232 aa12.99□□□□□ -0.33
SCARB2-221ENST00000640341 HNRNPKP61978 463 aaKnown RBP eCLIP12.99□□□□□ -0.33
SCARB2-221ENST00000640341 ZNF169Q14929 603 aaPredicted RBP12.99□□□□□ -0.33
SCARB2-221ENST00000640341 LYG2Q86SG7 212 aa12.99□□□□□ -0.33
SCARB2-221ENST00000640341 TMEM200AQ86VY9 491 aa12.99□□□□□ -0.33
SCARB2-221ENST00000640341 OR1M1Q8NGA1 313 aa12.99□□□□□ -0.33
SCARB2-221ENST00000640341 ASB10Q8WXI3 467 aa12.99□□□□□ -0.33
SCARB2-221ENST00000640341 ZNF285Q96NJ3 590 aa12.99□□□□□ -0.33
SCARB2-221ENST00000640341 SCPEP1Q9HB40 452 aa12.99□□□□□ -0.33
SCARB2-221ENST00000640341 SLC17A5Q9NRA2 495 aa12.99□□□□□ -0.33
SCARB2-221ENST00000640341 DUX4Q9UBX2 424 aa12.99□□□□□ -0.33
SCARB2-221ENST00000640341 CSAG2Q9Y5P2 127 aa12.99□□□□□ -0.33
SCARB2-221ENST00000640341 RNF222A6NCQ9 220 aa12.99□□□□□ -0.33
SCARB2-221ENST00000640341 VSTM2BA6NLU5 285 aa12.99□□□□□ -0.33
SCARB2-221ENST00000640341 RER1O15258 196 aa12.99□□□□□ -0.33
SCARB2-221ENST00000640341 SOCS1O15524 211 aa12.99□□□□□ -0.33
SCARB2-221ENST00000640341 CRTAPO75718 401 aaPredicted RBP12.99□□□□□ -0.33
SCARB2-221ENST00000640341 NAGAP17050 411 aa12.99□□□□□ -0.33
SCARB2-221ENST00000640341 RAB3AP20336 220 aa12.99□□□□□ -0.33
SCARB2-221ENST00000640341 ANOS1P23352 680 aa12.99□□□□□ -0.33
SCARB2-221ENST00000640341 SNTB1Q13884 538 aaKnown RBP12.99□□□□□ -0.33
SCARB2-221ENST00000640341 ZNF260Q3ZCT1 412 aa12.99□□□□□ -0.33
SCARB2-221ENST00000640341 OR5B2Q96R09 309 aa12.99□□□□□ -0.33
SCARB2-221ENST00000640341 TSNAXQ99598 290 aaKnown RBP12.99□□□□□ -0.33
SCARB2-221ENST00000640341 SAV1Q9H4B6 383 aaPredicted RBP12.99□□□□□ -0.33
SCARB2-221ENST00000640341 RAB22AQ9UL26 194 aa12.99□□□□□ -0.33
SCARB2-221ENST00000640341 TNFSF18Q9UNG2 199 aa12.99□□□□□ -0.33
SCARB2-221ENST00000640341 GPR31O00270 319 aa12.98□□□□□ -0.33
SCARB2-221ENST00000640341 TOR1AO14656 332 aa12.98□□□□□ -0.33
SCARB2-221ENST00000640341 ICAM2P13598 275 aa12.98□□□□□ -0.33
SCARB2-221ENST00000640341 CNR1P21554 472 aa12.98□□□□□ -0.33
SCARB2-221ENST00000640341 OR3A4PP47883 348 aa12.98□□□□□ -0.33
SCARB2-221ENST00000640341 DAP3P51398 398 aaKnown RBP12.98□□□□□ -0.33
SCARB2-221ENST00000640341 AKR1D1P51857 326 aa12.98□□□□□ -0.33
SCARB2-221ENST00000640341 PRSS12P56730 875 aa12.98□□□□□ -0.33
SCARB2-221ENST00000640341 COL13A1Q5TAT6 717 aaPredicted RBP12.98□□□□□ -0.33
SCARB2-221ENST00000640341 HSD17B13Q7Z5P4 300 aaPredicted RBP12.98□□□□□ -0.33
SCARB2-221ENST00000640341 OR52H1Q8NGJ2 320 aa12.98□□□□□ -0.33
SCARB2-221ENST00000640341 OR5D14Q8NGL3 314 aa12.98□□□□□ -0.33
SCARB2-221ENST00000640341 OR2AJ1Q8NGZ0 328 aa12.98□□□□□ -0.33
SCARB2-221ENST00000640341 TMED6Q8WW62 240 aa12.98□□□□□ -0.33
SCARB2-221ENST00000640341 ALX4Q9H161 411 aaPredicted RBP12.98□□□□□ -0.33
SCARB2-221ENST00000640341 FAM186AA6NE01 2351 aa12.98□□□□□ -0.33
SCARB2-221ENST00000640341 IGHV1OR21-1A0A087WYE8 117 aa12.98□□□□□ -0.33
SCARB2-221ENST00000640341 SHISA7A6NL88 538 aa12.98□□□□□ -0.33
SCARB2-221ENST00000640341 HSPB2A8KAH6 182 aa12.98□□□□□ -0.33
SCARB2-221ENST00000640341 CASRP41180 1078 aa12.98□□□□□ -0.33
SCARB2-221ENST00000640341 SLC6A9P48067 706 aa12.98□□□□□ -0.33
SCARB2-221ENST00000640341 HSPB2Q16082 182 aa12.98□□□□□ -0.33
SCARB2-221ENST00000640341 PRAMEF20Q5VT98 475 aa12.98□□□□□ -0.33
SCARB2-221ENST00000640341 BHLHE23Q8NDY6 225 aa12.98□□□□□ -0.33
SCARB2-221ENST00000640341 ELP5Q8TE02 316 aa12.98□□□□□ -0.33
SCARB2-221ENST00000640341 ZNF775Q96BV0 537 aaPredicted RBP12.98□□□□□ -0.33
SCARB2-221ENST00000640341 FOXRED1Q96CU9 486 aaPredicted RBP12.98□□□□□ -0.33
SCARB2-221ENST00000640341 CHMP1AQ9HD42 196 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms