RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 MN1Q10571 1320 aaPredicted RBP6.16□□□□□ -1.42
NECAP1-220ENST00000639841 CHD5Q8TDI0 1954 aa6.16□□□□□ -1.42
NECAP1-220ENST00000639841 WDR91A4D1P6 747 aa6.15□□□□□ -1.42
NECAP1-220ENST00000639841 G0S2P27469 103 aa6.15□□□□□ -1.42
NECAP1-220ENST00000639841 HSD11B1P28845 292 aa6.15□□□□□ -1.42
NECAP1-220ENST00000639841 DDOSTP39656 456 aa6.15□□□□□ -1.42
NECAP1-220ENST00000639841 RBM34P42696 430 aaKnown RBP6.15□□□□□ -1.42
NECAP1-220ENST00000639841 CAPZBP47756 277 aa6.15□□□□□ -1.42
NECAP1-220ENST00000639841 RPL24P83731 157 aaKnown RBP6.15□□□□□ -1.42
NECAP1-220ENST00000639841 ZNF85Q03923 595 aa6.15□□□□□ -1.42
NECAP1-220ENST00000639841 CDC20Q12834 499 aa6.15□□□□□ -1.42
NECAP1-220ENST00000639841 IMPG1Q17R60 797 aa6.15□□□□□ -1.42
NECAP1-220ENST00000639841 UNC50Q53HI1 259 aa6.15□□□□□ -1.42
NECAP1-220ENST00000639841 PIGGQ5H8A4 983 aa6.15□□□□□ -1.42
NECAP1-220ENST00000639841 FAM120AOSQ5T036 256 aa6.15□□□□□ -1.42
NECAP1-220ENST00000639841 RTL4Q6ZR62 310 aa6.15□□□□□ -1.42
NECAP1-220ENST00000639841 FAM183BPQ6ZVS7 135 aa6.15□□□□□ -1.42
NECAP1-220ENST00000639841 STRADAQ7RTN6 431 aa6.15□□□□□ -1.42
NECAP1-220ENST00000639841 C17orf82Q86X59 251 aaPredicted RBP6.15□□□□□ -1.42
NECAP1-220ENST00000639841 ZFAND4Q86XD8 727 aa6.15□□□□□ -1.42
NECAP1-220ENST00000639841 ENTHD1Q8IYW4 607 aa6.15□□□□□ -1.42
NECAP1-220ENST00000639841 OR2L5Q8NG80 312 aa6.15□□□□□ -1.42
NECAP1-220ENST00000639841 NTAN1Q96AB6 310 aa6.15□□□□□ -1.42
NECAP1-220ENST00000639841 PAPOLGQ9BWT3 736 aaKnown RBP6.15□□□□□ -1.42
NECAP1-220ENST00000639841 AURKAIP1Q9NWT8 199 aaPredicted RBP6.15□□□□□ -1.42
NECAP1-220ENST00000639841 ICAM5Q9UMF0 924 aa6.15□□□□□ -1.42
NECAP1-220ENST00000639841 TLN1Q9Y490 2541 aaKnown RBP6.15□□□□□ -1.42
NECAP1-220ENST00000639841 TVP23AA6NH52 213 aa6.15□□□□□ -1.43
NECAP1-220ENST00000639841 CDK2AP2O75956 126 aa6.15□□□□□ -1.43
NECAP1-220ENST00000639841 HOXD4P09016 255 aaPredicted RBP6.15□□□□□ -1.43
NECAP1-220ENST00000639841 FASP25445 335 aa6.15□□□□□ -1.43
NECAP1-220ENST00000639841 C21orf33P30042 268 aaPredicted RBP6.15□□□□□ -1.43
NECAP1-220ENST00000639841 HSPA9P38646 679 aaKnown RBP6.15□□□□□ -1.43
NECAP1-220ENST00000639841 CEBPGP53567 150 aa6.15□□□□□ -1.43
NECAP1-220ENST00000639841 RIPPLY3P57055 190 aa6.15□□□□□ -1.43
NECAP1-220ENST00000639841 RHOAP61586 193 aa6.15□□□□□ -1.43
NECAP1-220ENST00000639841 RPL8P62917 257 aaKnown RBP6.15□□□□□ -1.43
NECAP1-220ENST00000639841 RFTN2Q52LD8 501 aaPredicted RBP6.15□□□□□ -1.43
NECAP1-220ENST00000639841 LEKR1Q6ZMV7 388 aa6.15□□□□□ -1.43
NECAP1-220ENST00000639841 Q6ZTK2 550 aa6.15□□□□□ -1.43
NECAP1-220ENST00000639841 AHSA2Q719I0 299 aa6.15□□□□□ -1.43
NECAP1-220ENST00000639841 ZNF547Q8IVP9 402 aa6.15□□□□□ -1.43
NECAP1-220ENST00000639841 SLC34A3Q8N130 599 aa6.15□□□□□ -1.43
NECAP1-220ENST00000639841 ZNF738Q8NE65 137 aa6.15□□□□□ -1.43
NECAP1-220ENST00000639841 KBTBD8Q8NFY9 601 aa6.15□□□□□ -1.43
NECAP1-220ENST00000639841 OR10G6Q8NH81 332 aa6.15□□□□□ -1.43
NECAP1-220ENST00000639841 PHF10Q8WUB8 498 aaKnown RBP6.15□□□□□ -1.43
NECAP1-220ENST00000639841 RAB3CQ96E17 227 aa6.15□□□□□ -1.43
NECAP1-220ENST00000639841 DCUN1D5Q9BTE7 237 aa6.15□□□□□ -1.43
NECAP1-220ENST00000639841 TRIM45Q9H8W5 580 aaPredicted RBP6.15□□□□□ -1.43
NECAP1-220ENST00000639841 FBXO8Q9NRD0 319 aa6.15□□□□□ -1.43
NECAP1-220ENST00000639841 NLE1Q9NVX2 485 aaPredicted RBP6.15□□□□□ -1.43
NECAP1-220ENST00000639841 PLEKHJ1Q9NW61 149 aa6.15□□□□□ -1.43
NECAP1-220ENST00000639841 TAS2R9Q9NYW1 312 aa6.15□□□□□ -1.43
NECAP1-220ENST00000639841 USE1Q9NZ43 259 aa6.15□□□□□ -1.43
NECAP1-220ENST00000639841 A0A0D9SEW6 157 aa6.14□□□□□ -1.43
NECAP1-220ENST00000639841 NKX6-3A6NJ46 265 aa6.14□□□□□ -1.43
NECAP1-220ENST00000639841 VSTM2BA6NLU5 285 aa6.14□□□□□ -1.43
NECAP1-220ENST00000639841 CYSRT1A8MQ03 144 aa6.14□□□□□ -1.43
NECAP1-220ENST00000639841 ZNF587BE7ETH6 402 aa6.14□□□□□ -1.43
NECAP1-220ENST00000639841 PGRMC1O00264 195 aaKnown RBP6.14□□□□□ -1.43
NECAP1-220ENST00000639841 LYPD3O95274 346 aa6.14□□□□□ -1.43
NECAP1-220ENST00000639841 OXSR1O95747 527 aaPredicted RBP6.14□□□□□ -1.43
NECAP1-220ENST00000639841 PET100P0DJ07 73 aa6.14□□□□□ -1.43
NECAP1-220ENST00000639841 TCN2P20062 427 aa6.14□□□□□ -1.43
NECAP1-220ENST00000639841 OR3A2P47893 321 aa6.14□□□□□ -1.43
NECAP1-220ENST00000639841 CXCR4P61073 352 aa6.14□□□□□ -1.43
NECAP1-220ENST00000639841 MAGOHP61326 146 aaKnown RBP6.14□□□□□ -1.43
NECAP1-220ENST00000639841 EIF2B1Q14232 305 aaKnown RBP6.14□□□□□ -1.43
NECAP1-220ENST00000639841 CD226Q15762 336 aa6.14□□□□□ -1.43
NECAP1-220ENST00000639841 TMEM249Q2WGJ8 235 aa6.14□□□□□ -1.43
NECAP1-220ENST00000639841 SEL1L2Q5TEA6 688 aa6.14□□□□□ -1.43
NECAP1-220ENST00000639841 WDR74Q6RFH5 385 aaPredicted RBP6.14□□□□□ -1.43
NECAP1-220ENST00000639841 TMEM207Q6UWW9 146 aa6.14□□□□□ -1.43
NECAP1-220ENST00000639841 Q6YL49 198 aa6.14□□□□□ -1.43
NECAP1-220ENST00000639841 IQCF1Q8N6M8 205 aa6.14□□□□□ -1.43
NECAP1-220ENST00000639841 SSC4DQ8WTU2 575 aa6.14□□□□□ -1.43
NECAP1-220ENST00000639841 WDR34Q96EX3 536 aa6.14□□□□□ -1.43
NECAP1-220ENST00000639841 RBBP8Q99708 897 aa6.14□□□□□ -1.43
NECAP1-220ENST00000639841 SLC35A5Q9BS91 424 aa6.14□□□□□ -1.43
NECAP1-220ENST00000639841 KRTAP17-1Q9BYP8 105 aa6.14□□□□□ -1.43
NECAP1-220ENST00000639841 KRTAP4-9Q9BYQ8 210 aa6.14□□□□□ -1.43
NECAP1-220ENST00000639841 C1orf109Q9NX04 203 aa6.14□□□□□ -1.43
NECAP1-220ENST00000639841 FAM53CQ9NYF3 392 aa6.14□□□□□ -1.43
NECAP1-220ENST00000639841 SAR1BQ9Y6B6 198 aa6.14□□□□□ -1.43
NECAP1-220ENST00000639841 RP1P56715 2156 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 LRRK1Q38SD2 2015 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 EFCAB7A8K855 629 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 PLPP1O14494 284 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 RAB3DO95716 219 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 COX5BP10606 129 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 THRAP10827 490 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 LIFP15018 202 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 CA6P23280 308 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 SDC4P31431 198 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 RGS6P49758 472 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 AP1S1P61966 158 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 TUBA4AP68366 448 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 ST3GAL3Q11203 375 aa6.13□□□□□ -1.43
NECAP1-220ENST00000639841 PDK2Q15119 407 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms