RNA–Protein interactions for RNA: ENST00000637594.1

CLN8-214, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 406 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-214ENST00000637594 B9D1Q9UPM9 204 aa7.31□□□□□ -1.24
CLN8-214ENST00000637594 IER3IP1Q9Y5U9 82 aa7.31□□□□□ -1.24
CLN8-214ENST00000637594 IGLV1-36A0A0B4J1U3 117 aa7.3□□□□□ -1.24
CLN8-214ENST00000637594 DCTN6O00399 190 aa7.3□□□□□ -1.24
CLN8-214ENST00000637594 CXCR6O00574 342 aa7.3□□□□□ -1.24
CLN8-214ENST00000637594 ARPC3O15145 178 aa7.3□□□□□ -1.24
CLN8-214ENST00000637594 HLA-DPB1P04440 258 aa7.3□□□□□ -1.24
CLN8-214ENST00000637594 MDH1P40925 334 aaKnown RBP7.3□□□□□ -1.24
CLN8-214ENST00000637594 GPR4P46093 362 aa7.3□□□□□ -1.24
CLN8-214ENST00000637594 IER3P46695 156 aa7.3□□□□□ -1.24
CLN8-214ENST00000637594 RPS6KA3P51812 740 aa7.3□□□□□ -1.24
CLN8-214ENST00000637594 KRTAP10-3P60369 221 aa7.3□□□□□ -1.24
CLN8-214ENST00000637594 SRSF4Q08170 494 aaKnown RBP7.3□□□□□ -1.24
CLN8-214ENST00000637594 FAM201AQ5SY85 155 aa7.3□□□□□ -1.24
CLN8-214ENST00000637594 ASPHD2Q6ICH7 369 aa7.3□□□□□ -1.24
CLN8-214ENST00000637594 C8orf82Q6P1X6 216 aaPredicted RBP7.3□□□□□ -1.24
CLN8-214ENST00000637594 DNM1P34Q6PK57 102 aa7.3□□□□□ -1.24
CLN8-214ENST00000637594 FKBP9P1Q75LS8 142 aa7.3□□□□□ -1.24
CLN8-214ENST00000637594 ARPINQ7Z6K5 226 aa7.3□□□□□ -1.24
CLN8-214ENST00000637594 ZBTB46Q86UZ6 589 aa7.3□□□□□ -1.24
CLN8-214ENST00000637594 CYP4Z1Q86W10 505 aa7.3□□□□□ -1.24
CLN8-214ENST00000637594 LDLRAD3Q86YD5 345 aa7.3□□□□□ -1.24
CLN8-214ENST00000637594 OR6V1Q8N148 313 aa7.3□□□□□ -1.24
CLN8-214ENST00000637594 PNLDC1Q8NA58 520 aaKnown RBP7.3□□□□□ -1.24
CLN8-214ENST00000637594 OR11L1Q8NGX0 322 aa7.3□□□□□ -1.24
CLN8-214ENST00000637594 LINC01006Q8NI28 216 aa7.3□□□□□ -1.24
CLN8-214ENST00000637594 RP9Q8TA86 221 aaKnown RBP7.3□□□□□ -1.24
CLN8-214ENST00000637594 TBC1D15Q8TC07 691 aa7.3□□□□□ -1.24
CLN8-214ENST00000637594 GATAD2BQ8WXI9 593 aa7.3□□□□□ -1.24
CLN8-214ENST00000637594 WDFY2Q96P53 400 aa7.3□□□□□ -1.24
CLN8-214ENST00000637594 TBX15Q96SF7 602 aa7.3□□□□□ -1.24
CLN8-214ENST00000637594 HOPXQ9BPY8 73 aaPredicted RBP7.3□□□□□ -1.24
CLN8-214ENST00000637594 FUZQ9BT04 418 aa7.3□□□□□ -1.24
CLN8-214ENST00000637594 TRIM15Q9C019 465 aa7.3□□□□□ -1.24
CLN8-214ENST00000637594 C16orf95Q9H693 158 aa7.3□□□□□ -1.24
CLN8-214ENST00000637594 VIPAS39Q9H9C1 493 aa7.3□□□□□ -1.24
CLN8-214ENST00000637594 ERVK-18Q9QC07 812 aa7.3□□□□□ -1.24
CLN8-214ENST00000637594 RNF7Q9UBF6 113 aa7.3□□□□□ -1.24
CLN8-214ENST00000637594 KAAG1Q9UBP8 84 aa7.3□□□□□ -1.24
CLN8-214ENST00000637594 CYB5R1Q9UHQ9 305 aa7.3□□□□□ -1.24
CLN8-214ENST00000637594 NOP16Q9Y3C1 178 aaKnown RBP7.3□□□□□ -1.24
CLN8-214ENST00000637594 ENPP4Q9Y6X5 453 aa7.3□□□□□ -1.24
CLN8-214ENST00000637594 IGHV1-69DA0A0B4J2H0 117 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 LGALS8O00214 317 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 IDH3BO43837 385 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 FAM20BO75063 409 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 TOX4O94842 621 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 ECDO95905 644 aaPredicted RBP7.29□□□□□ -1.24
CLN8-214ENST00000637594 LHBP01229 141 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 IGHV1-69P01742 117 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 H1F0P07305 194 aaKnown RBP7.29□□□□□ -1.24
CLN8-214ENST00000637594 RHCEP18577 417 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 GGT2P36268 569 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 PROK1P58294 105 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 LIPEQ05469 1076 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 MALLQ13021 153 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 MPPED2Q15777 294 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 TAF9Q16594 264 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 RFX4Q33E94 735 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 SLC36A3Q495N2 470 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 OTPQ5XKR4 325 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 SLC18B1Q6NT16 456 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 SMARCD3Q6STE5 483 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 NAA40Q86UY6 237 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 SPERTQ8NA61 448 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 ZSCAN4Q8NAM6 433 aaPredicted RBP7.29□□□□□ -1.24
CLN8-214ENST00000637594 SLC26A10Q8NG04 563 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 NPRL2Q8WTW4 380 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 SLCO4A1Q96BD0 722 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 FAM46AQ96IP4 442 aaKnown RBP7.29□□□□□ -1.24
CLN8-214ENST00000637594 HSH2DQ96JZ2 352 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 C7orf34Q96L11 122 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 DHRS1Q96LJ7 313 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 TSSK2Q96PF2 358 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 CCT8L2Q96SF2 557 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 RBM4BQ9BQ04 359 aaKnown RBP7.29□□□□□ -1.24
CLN8-214ENST00000637594 SIRPDQ9H106 197 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 FN3KRPQ9HA64 309 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 PNRC2Q9NPJ4 139 aaKnown RBP7.29□□□□□ -1.24
CLN8-214ENST00000637594 ACOXLQ9NUZ1 547 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 NDUFAF4Q9P032 175 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 KIF17Q9P2E2 1029 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 CTSZQ9UBR2 303 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 RPS6KA6Q9UK32 745 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 TMCC3Q9ULS5 477 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 RNF114Q9Y508 228 aa7.29□□□□□ -1.24
CLN8-214ENST00000637594 TRAV38-1A0A0B4J264 116 aa7.28□□□□□ -1.24
CLN8-214ENST00000637594 IGHV3-64DA0A0J9YX35 117 aa7.28□□□□□ -1.24
CLN8-214ENST00000637594 UNC119BA6NIH7 251 aa7.28□□□□□ -1.24
CLN8-214ENST00000637594 SOCS2O14508 198 aa7.28□□□□□ -1.24
CLN8-214ENST00000637594 NDUFAB1O14561 156 aa7.28□□□□□ -1.24
CLN8-214ENST00000637594 ZNF682O95780 498 aa7.28□□□□□ -1.24
CLN8-214ENST00000637594 SERPINA1P01009 418 aa7.28□□□□□ -1.24
CLN8-214ENST00000637594 SFTPBP07988 381 aa7.28□□□□□ -1.24
CLN8-214ENST00000637594 TROVE2P10155 538 aaKnown RBP eCLIP7.28□□□□□ -1.24
CLN8-214ENST00000637594 OTX1P32242 354 aaPredicted RBP7.28□□□□□ -1.24
CLN8-214ENST00000637594 TPTEP56180 551 aa7.28□□□□□ -1.24
CLN8-214ENST00000637594 TRAP1Q12931 704 aaKnown RBP7.28□□□□□ -1.24
CLN8-214ENST00000637594 MEP1BQ16820 701 aa7.28□□□□□ -1.24
CLN8-214ENST00000637594 TEX36Q5VZQ5 186 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms