RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 RAF1P04049 648 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 LHX2P50458 406 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 ARF1P84077 181 aaKnown RBP11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 SCRN3Q0VDG4 424 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 SLC25A35Q3KQZ1 300 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 RNASE12Q5GAN4 147 aaKnown RBP11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 ZNF684Q5T5D7 378 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 SLC7A5P1Q8MH63 180 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 PIAS4Q8N2W9 510 aaPredicted RBP11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 NOXO1Q8NFA2 376 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 WDYHV1Q96HA8 205 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 FYTTD1Q96QD9 318 aaKnown RBP11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 SNX18Q96RF0 628 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 MARVELD1Q9BSK0 173 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 TRAV1-2A0A0B4J238 106 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 FTCDNL1E5RQL4 147 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 EGR3Q06889 387 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 GLB1L2Q8IW92 636 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 LRRC75AQ8NAA5 344 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 TSPAN32Q96QS1 320 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 ELOVL3Q9HB03 270 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 ELL3Q9HB65 397 aaPredicted RBP11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 PROK2Q9HC23 129 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 SMAD9O15198 467 aaKnown RBP11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 SELENOFO60613 162 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 ERCC1P07992 297 aaPredicted RBP11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 HLA-DMAP28067 261 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 TBRG1Q3YBR2 411 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 CORO6Q6QEF8 472 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 MRGPRGQ86SM5 289 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 CREB3L1Q96BA8 519 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 PELI1Q96FA3 418 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 GFI1Q99684 422 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 FOXB1Q99853 325 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 ASH2LQ9UBL3 628 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 COPS3Q9UNS2 423 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 RAMP1O60894 148 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 TGM6O95932 706 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 WNT11O96014 354 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 MSR1P21757 451 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 CLDN18P56856 261 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 SNTB2Q13425 540 aaKnown RBP11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 TMEM69Q5SWH9 247 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 UNQ6126/PRO20091Q6UXV3 157 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 BEND4Q6ZU67 534 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 CREB3L2Q70SY1 520 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 KDF1Q8NAX2 398 aaPredicted RBP11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 ASB5Q8WWX0 329 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 THAP7Q9BT49 309 aaPredicted RBP11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 RANGRFQ9HD47 186 aaPredicted RBP11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 TAS2R8Q9NYW2 309 aa11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 NUFIP1Q9UHK0 495 aaKnown RBP11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 MRPS18CQ9Y3D5 142 aaKnown RBP11.01□□□□□ -0.65
SYNGAP1-207ENST00000628646 NAP1L6A6NFF2 107 aa11□□□□□ -0.65
SYNGAP1-207ENST00000628646 LAP3P28838 519 aa11□□□□□ -0.65
SYNGAP1-207ENST00000628646 CDONQ4KMG0 1287 aa11□□□□□ -0.65
SYNGAP1-207ENST00000628646 LINC01590Q5TEZ4 76 aa11□□□□□ -0.65
SYNGAP1-207ENST00000628646 OR7E24Q6IFN5 339 aa11□□□□□ -0.65
SYNGAP1-207ENST00000628646 OR4M1Q8NGD0 313 aa11□□□□□ -0.65
SYNGAP1-207ENST00000628646 SPTSSAQ969W0 71 aa11□□□□□ -0.65
SYNGAP1-207ENST00000628646 GPX7Q96SL4 187 aaPredicted RBP11□□□□□ -0.65
SYNGAP1-207ENST00000628646 OPN3Q9H1Y3 402 aaPredicted RBP11□□□□□ -0.65
SYNGAP1-207ENST00000628646 ZDHHC11Q9H8X9 412 aa11□□□□□ -0.65
SYNGAP1-207ENST00000628646 NKIRAS2Q9NYR9 191 aa11□□□□□ -0.65
SYNGAP1-207ENST00000628646 HHLA2Q9UM44 414 aa11□□□□□ -0.65
SYNGAP1-207ENST00000628646 FZD7O75084 574 aa11□□□□□ -0.65
SYNGAP1-207ENST00000628646 UBL3O95164 117 aa11□□□□□ -0.65
SYNGAP1-207ENST00000628646 LTBQ06643 244 aa11□□□□□ -0.65
SYNGAP1-207ENST00000628646 MAB21L1Q13394 359 aa11□□□□□ -0.65
SYNGAP1-207ENST00000628646 MEP1BQ16820 701 aa11□□□□□ -0.65
SYNGAP1-207ENST00000628646 HIST1H2AAQ96QV6 131 aa11□□□□□ -0.65
SYNGAP1-207ENST00000628646 ABHD1Q96SE0 405 aa11□□□□□ -0.65
SYNGAP1-207ENST00000628646 WASF3Q9UPY6 502 aa11□□□□□ -0.65
SYNGAP1-207ENST00000628646 A0A1B0GUH1 482 aa11□□□□□ -0.65
SYNGAP1-207ENST00000628646 OR6C68A6NDL8 312 aa11□□□□□ -0.65
SYNGAP1-207ENST00000628646 EFNA2O43921 213 aa11□□□□□ -0.65
SYNGAP1-207ENST00000628646 RBBP9O75884 186 aa11□□□□□ -0.65
SYNGAP1-207ENST00000628646 PAHP00439 452 aa11□□□□□ -0.65
SYNGAP1-207ENST00000628646 LIPNQ5VXI9 398 aa11□□□□□ -0.65
SYNGAP1-207ENST00000628646 FAM122BQ7Z309 247 aa11□□□□□ -0.65
SYNGAP1-207ENST00000628646 GPER1Q99527 375 aa11□□□□□ -0.65
SYNGAP1-207ENST00000628646 C1orf198Q9H425 327 aa11□□□□□ -0.65
SYNGAP1-207ENST00000628646 ZNF222Q9UK12 451 aa11□□□□□ -0.65
SYNGAP1-207ENST00000628646 FLVCR1Q9Y5Y0 555 aa11□□□□□ -0.65
SYNGAP1-207ENST00000628646 WISP1O95388 367 aa10.99□□□□□ -0.65
SYNGAP1-207ENST00000628646 NPR2P20594 1047 aa10.99□□□□□ -0.65
SYNGAP1-207ENST00000628646 GNLYP22749 145 aa10.99□□□□□ -0.65
SYNGAP1-207ENST00000628646 SLC6A1P30531 599 aa10.99□□□□□ -0.65
SYNGAP1-207ENST00000628646 RAB11BQ15907 218 aa10.99□□□□□ -0.65
SYNGAP1-207ENST00000628646 PLA1AQ53H76 456 aa10.99□□□□□ -0.65
SYNGAP1-207ENST00000628646 TSPO2Q5TGU0 170 aa10.99□□□□□ -0.65
SYNGAP1-207ENST00000628646 JAGN1Q8N5M9 183 aa10.99□□□□□ -0.65
SYNGAP1-207ENST00000628646 LIPHQ8WWY8 451 aa10.99□□□□□ -0.65
SYNGAP1-207ENST00000628646 MCHR2Q969V1 340 aa10.99□□□□□ -0.65
SYNGAP1-207ENST00000628646 PRORYQ9H606 182 aa10.99□□□□□ -0.65
SYNGAP1-207ENST00000628646 PLSCR3Q9NRY6 295 aa10.99□□□□□ -0.65
SYNGAP1-207ENST00000628646 SPEF1Q9Y4P9 236 aa10.99□□□□□ -0.65
SYNGAP1-207ENST00000628646 PCNX3Q9H6A9 2034 aa10.99□□□□□ -0.65
SYNGAP1-207ENST00000628646 ARPC4-TTLL3A0A0A6YYG9 625 aa10.99□□□□□ -0.65
SYNGAP1-207ENST00000628646 ZNF254O75437 659 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms